BAC Information

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BAC

Clone NameB6Ng01-034L20
Chromosome1 (Build37)
Map Location 159,618,618 - 159,699,963
singlet/doubletdoublet
Overlap genenone
Upstream geneC530043G21Rik, LOC433368, Ralgps2, Angptl1, 4930439D14Rik, 1700057K13Rik, Rasal2, Gabarapl2-ps1_1522.1, 2810025M15Rik, BC026585, Lztr2, LOC664935, LOC100039217
Downstream gene6430517E21Rik, Astn1, Pappa2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034L20.bB6Ng01-034L20.g
ACCDH863405DH863406
length901954
definitionDH863405|Mus musculus domesticus DNA, BAC clone: B6Ng01-034L20, 5' end.DH863406|Mus musculus domesticus DNA, BAC clone: B6Ng01-034L20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(159,618,618 - 159,619,532)(159,699,002 - 159,699,963)
sequence
gaattcttcccccatagtccgttcccttagcctctatgagggttcttctc
ccgtataacccctatcctaggatatcaagtctctacaggattaggtgcat
catctcccactgtggccagataagcagctctctgctacgtaagtgctggg
ggccttggaccagcctgtgtatgctcttgggctggtggcccagtctctgg
gagctcccaggggtccaggtgagttgaagagaaggttatgctactgccac
atggtgtctgagtcagtgttctactgcagtgaggaaacaccgggactgca
gcaagtcttataaaggaaaacgcttaattggggctgtaagccatacaggt
tcagatgtttagtccgttattgtcatagcagaaaacatgttggcatatag
gcaggcatggatctggagaagaagctgagagttctacatctagatcagca
gatagcagaaagggaaagagccactgggcctgacttgagcttttgaaacc
tcaaaactcatccccactgacacattttctccaataaggtcacaccaatt
ccaacaaggccacacatcctagtcctttaaaataatgccactccctgtgg
ccctgttagggccatttcattcaaaccctaactcattaggaaactttagg
aatgttctgagaccagaaagtgaaacatagctcagaaaaaaaatgctcaa
gcaaccagagcctggtaagcatagcacaccttgtttggctctagggagcc
aggcctaggattcctgaaatgaaattgggaatcatgaaatcatggaacct
aagtttgctcatttgatggtcatgtagatgtcttccttgaaccttgccct
ccaacattgtctcactcctctaatactgttttgcaattcctctttttttt
t
gaattcccaataagtacaaaacatcctttccaaacatcacttttcttgaa
ggtgagatttagttgataagtaatgtgttgaatctatgtcacagagaagt
atatagttaatttgtttttaaatttttaagtgcattatctatttaatgtg
tgtttttatgttccttgaatgtatggcaccagtttttactacaaaacaca
atactgttttgtactaaatgattttgctgttttcatttaatattcacatg
tcttaaaaagaagacagtaagataatgaaacagaaattgggagacggctg
tgaatctaagatgtaataatggcatttgaatctactaacacctcctccac
aaacccaaaacccatctattttattctatgattctttgggttttaatata
aaatggtccaccatgagtttgcatgctaaatgtgtgtatcctagggagag
aaaataggggagtcatatgtggtcctcctccttcttctcctctttctctt
cctcctcctcttctttctgtccaccatgggtgaacaggattccccaccac
ataatttcaccaccatgatgctctgcccaagtcatttaactaaaccctcc
aaaactgcaagcccagttaatccttcctccactgagttggctatgtcaga
tattttggctattgttattgttccttgtgggaatctccagatttgactgg
actgcagtgggccaaattcctgcttagaaccaataaacactgaacattca
ccaagagcagcctatatgtatgttttcctatccctgggctgtcttgagta
taagcaaatatccactggccatactgtaaatccagaggggactaaaacat
tgcagacgcatttgcaataccctcctccacccgttgaatcctttctggag
cgtagaggtgataggaaaaacaatgtctgcgaacaaaactcttttttcca
gaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_159618618_159619532
seq2: B6Ng01-034L20.b_46_946

seq1  GAATTCTTCCCCCATAGTCCGTTCCCTTAGCCTCTATGAGGGTTCTTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCCCCATAGTCCGTTCCCTTAGCCTCTATGAGGGTTCTTCTC  50

seq1  CCGTATAACCCCTATCCTAGGATATCAAGTCTCTACAGGATTAGGTGCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTATAACCCCTATCCTAGGATATCAAGTCTCTACAGGATTAGGTGCAT  100

seq1  CATCTCCCACTGTGGCCAGATAAGCAGCTCTCTGCTACGTAAGTGCTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCCCACTGTGGCCAGATAAGCAGCTCTCTGCTACGTAAGTGCTGGG  150

seq1  GGCCTTGGACCAGCCTGTGTATGCTCTTGGGCTGGTGGCCCAGTCTCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTGGACCAGCCTGTGTATGCTCTTGGGCTGGTGGCCCAGTCTCTGG  200

seq1  GAGCTCCCAGGGGTCCAGGTGAGTTGAAGAGAAGGTTATGCTACTGCCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCCCAGGGGTCCAGGTGAGTTGAAGAGAAGGTTATGCTACTGCCAC  250

seq1  ATGGTGTCTGAGTCAGTGTTCTACTGCAGTGAGGAAACACCGGGACTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGTCTGAGTCAGTGTTCTACTGCAGTGAGGAAACACCGGGACTGCA  300

seq1  GCAAGTCTTATAAAGGAAAACGCTTAATTGGGGCTGTAAGCCATACAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTCTTATAAAGGAAAACGCTTAATTGGGGCTGTAAGCCATACAGGT  350

seq1  TCAGATGTTTAGTCCGTTATTGTCATAGCAGAAAACATGTTGGCATATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATGTTTAGTCCGTTATTGTCATAGCAGAAAACATGTTGGCATATAG  400

seq1  GCAGGCATGGATCTGGAGAAGAAGCTGAGAGTTCTACATCTAGATCAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCATGGATCTGGAGAAGAAGCTGAGAGTTCTACATCTAGATCAGCA  450

seq1  GATAGCAGAAAGGGAAAGAGCCACTGGGCCTGACTTGAGCTTTTGAAACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGCAGAAAGGGAAAGAGCCACTGGGCCTGACTTGAGCTTTTGAAACC  500

seq1  TCAAAACTCATCCCCACTGACACATTTTCTCCAATAAGGTCACACCAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAACTCATCCCCACTGACACATTTTCTCCAATAAGGTCACACCAATT  550

seq1  CCAACAAGGCCACACATCCTAGTCCTTTCAAATAATGCCACTCCCTGTGG  600
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CCAACAAGGCCACACATCCTAGTCCTTTAAAATAATGCCACTCCCTGTGG  600

seq1  CCCTGTTAGGGCCATTTCATTCAAACCCTAACTCA-TAGGAAACTTTAGG  649
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CCCTGTTAGGGCCATTTCATTCAAACCCTAACTCATTAGGAAACTTTAGG  650

seq1  AATGTTCTGAGACCAGAAAAGTGAAACAATAGCTCAGAAAAAAAATGCTC  699
      |||||||||||||||| |||||||||| ||||||||||||||||||||||
seq2  AATGTTCTGAGACCAG-AAAGTGAAAC-ATAGCTCAGAAAAAAAATGCTC  698

seq1  AAGCAACCAGAGCCTGGTAAGCATAGCACAACTTGTTTGGGCTCTAGGGA  749
      |||||||||||||||||||||||||||||| ||||||| |||||||||||
seq2  AAGCAACCAGAGCCTGGTAAGCATAGCACACCTTGTTT-GGCTCTAGGGA  747

seq1  GCCAGGCCTAGGATTCCTGAGATGAAATTGTGGAATCATGAAATCATGGA  799
      |||||||||||||||||||| ||||||||| |||||||||||||||||||
seq2  GCCAGGCCTAGGATTCCTGAAATGAAATTG-GGAATCATGAAATCATGGA  796

seq1  ACCTAAAGTTTGCTTCAGTTTGATTGGTCATGTAGAATGTCTTCCTTGAC  849
      |||| |||||||| ||| ||||| ||||||||||| ||||||||||||| 
seq2  ACCT-AAGTTTGC-TCA-TTTGA-TGGTCATGTAG-ATGTCTTCCTTGAA  841

seq1  CTTTGCCCCTCCAAACATGGTCTCACTCCTCTAATACTGTTTTTGTCAAT  899
      | ||| |||||| ||||| ||||||||||||||||||||||||   ||||
seq2  CCTTG-CCCTCC-AACATTGTCTCACTCCTCTAATACTGTTTT--GCAAT  887

seq1  TTCTTTCTTTTTTTTT  915
      | |  |||||||||||
seq2  TCC--TCTTTTTTTTT  901

seq1: chr1_159699002_159699963
seq2: B6Ng01-034L20.g_71_1024 (reverse)

seq1  ATTCTGGAAAAAAAAAGAGTTTTGCTCTGCAGACATTGTCTTCCCTACCA  50
      |||||||   |||||||||||||| || ||||||||||| || |||| ||
seq2  ATTCTGG---AAAAAAGAGTTTTGTTC-GCAGACATTGTTTTTCCTATCA  46

seq1  CCTCCTACGGCTCCAGAAAGGATTCAGC-GGTGGAAGTGGGTATTGCCAC  99
      ||| |||| ||||||||||||||||| | |||||| | ||||||||| | 
seq2  CCT-CTAC-GCTCCAGAAAGGATTCAACGGGTGGAGGAGGGTATTGCAAA  94

seq1  TGCGTCTGCACTGGTTTTTGTCCCCTTCTGACTTTACAGTATGGCCAGTG  149
      |||||||||| | ||||| |||||| ||||  ||||||||||||||||||
seq2  TGCGTCTGCAAT-GTTTTAGTCCCC-TCTGGATTTACAGTATGGCCAGTG  142

seq1  GATATTTGCTTTATACTCAAGACAGCCCAGGGATAGGAAAACATACATAT  199
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTGC-TTATACTCAAGACAGCCCAGGGATAGGAAAACATACATAT  191

seq1  AGGCTGCTCTTGGTGATTGTTCAGTGTTTATTAGTTCTAAGCAGGAATTT  249
      |||||||||||||||| ||||||||||||||| |||||||||||||||||
seq2  AGGCTGCTCTTGGTGAATGTTCAGTGTTTATTGGTTCTAAGCAGGAATTT  241

seq1  GGCCCACTTGCAGTCCAGTC-AATCTTGAGATTCCCACAAGGAACAATAA  298
      ||||||| |||||||||||| ||||| |||||||||||||||||||||||
seq2  GGCCCAC-TGCAGTCCAGTCAAATCTGGAGATTCCCACAAGGAACAATAA  290

seq1  CAATAGCCAAAATATCTGACATAGCCAACTCAGTGGAGGAAGGATTAACT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGCCAAAATATCTGACATAGCCAACTCAGTGGAGGAAGGATTAACT  340

seq1  GGGCTTGCAGTTTTGGAGGGTTTAGTTAAATGACTTGGGCAGAGCATCAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTGCAGTTTTGGAGGGTTTAGTTAAATGACTTGGGCAGAGCATCAT  390

seq1  GGTGGTGAAATTATGTGGTGGGGAATCCTGTTCACCCATGGTGGACAGAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTGAAATTATGTGGTGGGGAATCCTGTTCACCCATGGTGGACAGAA  440

seq1  AGAAGAGGAGGAGGAAGAGAAAGAGGAGAAGAAGGAGGAGGACCACATAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGGAGGAGGAAGAGAAAGAGGAGAAGAAGGAGGAGGACCACATAT  490

seq1  GACTCCCCTATTTTCTCTCCCTAGGATACACACATTTAGCATGCAAACTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCCCTATTTTCTCTCCCTAGGATACACACATTTAGCATGCAAACTC  540

seq1  ATGGTGGACCATTTTATATTAAAACCCAAAGAATCATAGAATAAAATAGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGGACCATTTTATATTAAAACCCAAAGAATCATAGAATAAAATAGA  590

seq1  TGGGTTTTGGGTTTGTGGAGGAGGTGTTAGTAGATTCAAATGCCATTATT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTTTGGGTTTGTGGAGGAGGTGTTAGTAGATTCAAATGCCATTATT  640

seq1  ACATCTTAGATTCACAGCCGTCTCCCAATTTCTGTTTCATTATCTTACTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTTAGATTCACAGCCGTCTCCCAATTTCTGTTTCATTATCTTACTG  690

seq1  TCTTCTTTTTAAGACATGTGAATATTAAATGAAAACAGCAAAATCATTTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTTTTAAGACATGTGAATATTAAATGAAAACAGCAAAATCATTTA  740

seq1  GTACAAAACAGTATTGTGTTTTGTAGTAAAAACTGGTGCCATACATTCAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAAACAGTATTGTGTTTTGTAGTAAAAACTGGTGCCATACATTCAA  790

seq1  GGAACATAAAAACACACATTAAATAGATAATGCACTTAAAAATTTAAAAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACATAAAAACACACATTAAATAGATAATGCACTTAAAAATTTAAAAA  840

seq1  CAAATTAACTATATACTTCTCTGTGACATAGATTCAACACATTACTTATC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTAACTATATACTTCTCTGTGACATAGATTCAACACATTACTTATC  890

seq1  AACTAAATCTCACCTTCAAGAAAAGTGATGTTTGGAAAGGATGTTTTGTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAATCTCACCTTCAAGAAAAGTGATGTTTGGAAAGGATGTTTTGTA  940

seq1  CTTATTGAGAATTC  962
      ||||||| ||||||
seq2  CTTATTGGGAATTC  954