BAC Information

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BAC

Clone NameB6Ng01-034N02
Chromosome1 (Build37)
Map Location 128,518,494 - 128,648,558
singlet/doubletdoublet
Overlap geneE030049G20Rik
Upstream geneLypd1
Downstream geneLOC383559, Mgat5, LOC667090, Tmem163, Acmsd
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034N02.bB6Ng01-034N02.g
ACCDH863458DH863459
length8401,027
definitionDH863458|Mus musculus domesticus DNA, BAC clone: B6Ng01-034N02, 5' end.DH863459|Mus musculus domesticus DNA, BAC clone: B6Ng01-034N02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,518,494 - 128,519,338)(128,647,538 - 128,648,558)
sequence
caagggataaaacaacctcctctggcctgtgcaggcatctacacacatgt
agtgcacaaacagacaagcaggcaaacgcacatacccataaataaaacca
gatcattagagagaaaaaccaccaccactttcaaacaaatcactattgta
gaatgctttggccataaaggtcctgctcggctctcctctgggatccgtgt
aacttgagtggctaatggagccagtgtgatttcttcactcagcacttcag
acacagacatccacacctgcttgcatgctcacacatattagtagaaaaga
aaataccaacctggactcaaattccagtgcgagccacaggtggtatcaag
tgccagcctctgacaacggggcatgaaagaaatcaatgttcttgccaaga
gaagaaatattaccacagtgtgtctattccaaatatttactcttttggct
gaaataccagtgggcaccaggccttctgtttgaacactgctttgagtaga
actcattgaaatgacatagagacttcgcataagagcattatgattctact
tggaacatatcacaccattcactgcaaagaaaattcagagagacagagta
atcatatctatttccacatagtcagtccccaaaacagacctatacacagc
tttgcataaagcctaaaagagacagtgctatcaatgaaaggtaagaaaca
tggctatctgtaagtcatagacttgaattacagctacttctaaagatcat
acctaagttggagaaatgaaacaattaaacacttctaaattttgtgttta
ttttaagatttatttgtgtgtgtgtgagtgtgtgtgtgac
gaattcaacagttaggctagagagccggccagcaagcctcagggctcctt
ccatttctatctccccagtgctgtgactcaggtgtgtgctaccattcctg
gctttttatatgaatcctgggaatcaaacccagatcttcatgagcatgct
gcaagcattttcctgagccatcttcccagaccatgttgagttttttggta
cctgatgacagatagatacattaggttgatttctaaaaggtttggggaag
aggcacagagaagacaaggacttggtcctaaggatatgttcttcctgggt
catgcatttacacgtgtgcctgggcctggtcttagaaaacagtgacaagt
gttctctctgccagtggttgttcaaaatggatgctccacaggcagacccg
gagtctgttcacaggtactccctgacacaggacggctgcccagagaccat
caaagctagtggggaaaatcttgattctgtgtggggaatcaagccatgct
gacttgttctaagagaatcacagactttcctgagccctcaacagacaccc
tcccatgggcgcccatgatttatgctgcaccataactccattatactggc
tcagtagaagcagctgtcccctgaagttattaaagctgctcatttcttct
cagcaccccatggtgcggagtttccatagcgagagagaaaatagctgttt
tcctttccacgcctctagcctggggttcaatttccacggcctgaataata
cacagagctgcgagaaacagaggcaccagcatttaaatcctccttgacca
aaggcttggagtatgaataatttgcaatgtaggatttctaaaatatttat
tttatctacaatcggttttcaattttcatcctgcagagaggcaagaggta
gactggggtttcaaaatcctttccccgaagaagcagacgtgacctgggtt
gctcccacttagcagaaacccaaggggtgagcagatggttttccaaaggg
aaatctgagagatgttggcctcctgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_128518494_128519338
seq2: B6Ng01-034N02.b_54_893

seq1  CAAGGGATAAAACAACCTCCTCTGGCCTGTGCAGGCATCTACACACATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGATAAAACAACCTCCTCTGGCCTGTGCAGGCATCTACACACATGT  50

seq1  AGTGCACAAACAGACAAGCAGGCAAACGCACATACCCATAAATAAAACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCACAAACAGACAAGCAGGCAAACGCACATACCCATAAATAAAACCA  100

seq1  GATCATTAGAGAGAAAAACCACCACCACTTTCAAACAAATCACTATTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATTAGAGAGAAAAACCACCACCACTTTCAAACAAATCACTATTGTA  150

seq1  GAATGCTTTGGCCATAAAGGTCCTGCTCGGCTCTCCTCTGGGATCCGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCTTTGGCCATAAAGGTCCTGCTCGGCTCTCCTCTGGGATCCGTGT  200

seq1  AACTTGAGTGGCTAATGGAGCCAGTGTGATTTCTTCACTCAGCACTTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGAGTGGCTAATGGAGCCAGTGTGATTTCTTCACTCAGCACTTCAG  250

seq1  ACACAGACATCCACACCTGCTTGCATGCTCACACATATTAGTAGAAAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGACATCCACACCTGCTTGCATGCTCACACATATTAGTAGAAAAGA  300

seq1  AAATACCAACCTGGACTCAAATTCCAGTGCGAGCCACAGGTGGTATCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACCAACCTGGACTCAAATTCCAGTGCGAGCCACAGGTGGTATCAAG  350

seq1  TGCCAGCCTCTGACAACGGGGCATGAAAGAAATCAATGTTCTTGCCAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGCCTCTGACAACGGGGCATGAAAGAAATCAATGTTCTTGCCAAGA  400

seq1  GAAGAAATATTACCACAGTGTGTCTATTCCAAATATTTACTCTTTTGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAATATTACCACAGTGTGTCTATTCCAAATATTTACTCTTTTGGCT  450

seq1  GAAATACCAGTGGGCACCAGGCCTTCTGTTTGAACACTGCTTTGAGTAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATACCAGTGGGCACCAGGCCTTCTGTTTGAACACTGCTTTGAGTAGA  500

seq1  ACTCATTGAAATGACATAGAGACTTCGCATAAGAGCATTATGATTCTACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATTGAAATGACATAGAGACTTCGCATAAGAGCATTATGATTCTACT  550

seq1  TGGAACATATCACACCATTCACTGCAAAGAAAATTCAGAGAGACAGAGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACATATCACACCATTCACTGCAAAGAAAATTCAGAGAGACAGAGTA  600

seq1  ATCATATCTATTTCCACATAGTCAGTCCCCAAAACAGACCTATACACAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATATCTATTTCCACATAGTCAGTCCCCAAAACAGACCTATACACAGC  650

seq1  TTTGCATAAAGCCTAAAAGAGACAGTGCTATCAATGAAGGTTAAGAAACA  700
      |||||||||||||||||||||||||||||||||||||| | |||||||||
seq2  TTTGCATAAAGCCTAAAAGAGACAGTGCTATCAATGAAAGGTAAGAAACA  700

seq1  TGGCTATCTGTAAGTCATAGACTTGAATTACAGCTACTTCTAAAGATCAA  750
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TGGCTATCTGTAAGTCATAGACTTGAATTACAGCTACTTCTAAAGATC-A  749

seq1  TACCTAAGTTGGAGAAAATGAAACAATTAAAACACTTCTAAATTTTGTGT  800
      |||||||||||||| ||||||||||||| |||||||||||||||||||||
seq2  TACCTAAGTTGGAG-AAATGAAACAATT-AAACACTTCTAAATTTTGTGT  797

seq1  TTATTTTTAAAGATTTATTTGTGTGTGTGTGAGTGTGTGTGTGAC  845
      |||||||  ||||||||||||||||||||||||||||||||||||
seq2  TTATTTT--AAGATTTATTTGTGTGTGTGTGAGTGTGTGTGTGAC  840

seq1: chr1_128647538_128648558
seq2: B6Ng01-034N02.g_66_1092 (reverse)

seq1  CTCAGGAGGCCAACATCTTCCCAGA-TTCCCCTTGGGAAACCATCTGCTC  49
      ||||||||||||||||| || |||| ||||| |||| |||||||||||||
seq2  CTCAGGAGGCCAACATC-TCTCAGATTTCCCTTTGGAAAACCATCTGCTC  49

seq1  ACCCC-TGGGTTTCTGCTAAGTGGGAGCAACCCAGGTCACGTCTGCTTC-  97
      ||||| ||||||||||||||||||||||||||||||||||||||||||| 
seq2  ACCCCTTGGGTTTCTGCTAAGTGGGAGCAACCCAGGTCACGTCTGCTTCT  99

seq1  TCGGGG-AAGGATTTTGAAACCCCAGTCTACCTCTTGCCTCTCTGCAGGA  146
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGGAAAGGATTTTGAAACCCCAGTCTACCTCTTGCCTCTCTGCAGGA  149

seq1  TGAAAATGGAAAA-CGA-TGTAGAT-AAATAAATATTTTAGAAATCCTAC  193
      ||||||| ||||| ||| ||||||| ||||||||||||||||||||||||
seq2  TGAAAATTGAAAACCGATTGTAGATAAAATAAATATTTTAGAAATCCTAC  199

seq1  ATTGCAAATTATTCATACTCCAAGCCTTTGGTCAAGGAGGATTTAAATGC  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCAAATTATTCATACTCCAAGCCTTTGGTCAAGGAGGATTTAAATGC  249

seq1  TGGTGCCTCTGTTTCTCGCAGCTCTGTGTATTATTCAGGCCGTGGAAATT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCCTCTGTTTCTCGCAGCTCTGTGTATTATTCAGGCCGTGGAAATT  299

seq1  GAACCCCAGGCTAGAGGCGTGGAAAGGAAAACAGCTATTTTCTCTCTCGC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCCAGGCTAGAGGCGTGGAAAGGAAAACAGCTATTTTCTCTCTCGC  349

seq1  TATGGAAACTCCGCACCATGGGGTGCTGAGAAGAAATGAGCAGCTTTAAT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAAACTCCGCACCATGGGGTGCTGAGAAGAAATGAGCAGCTTTAAT  399

seq1  AACTTCAGGGGACAGCTGCTTCTACTGAGCCAGTATAATGGAGTTATGGT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCAGGGGACAGCTGCTTCTACTGAGCCAGTATAATGGAGTTATGGT  449

seq1  GCAGCATAAATCATGGGCGCCCATGGGAGGGTGTCTGTTGAGGGCTCAGG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCATAAATCATGGGCGCCCATGGGAGGGTGTCTGTTGAGGGCTCAGG  499

seq1  AAAGTCTGTGATTCTCTTAGAACAAGTCAGCATGGCTTGATTCCCCACAC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCTGTGATTCTCTTAGAACAAGTCAGCATGGCTTGATTCCCCACAC  549

seq1  AGAATCAAGATTTTCCCCACTAGCTTTGATGGTCTCTGGGCAGCCGTCCT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCAAGATTTTCCCCACTAGCTTTGATGGTCTCTGGGCAGCCGTCCT  599

seq1  GTGTCAGGGAGTACCTGTGAACAGACTCCGGGTCTGCCTGTGGAGCATCC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAGGGAGTACCTGTGAACAGACTCCGGGTCTGCCTGTGGAGCATCC  649

seq1  ATTTTGAACAACCACTGGCAGAGAGAACACTTGTCACTGTTTTCTAAGAC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGAACAACCACTGGCAGAGAGAACACTTGTCACTGTTTTCTAAGAC  699

seq1  CAGGCCCAGGCACACGTGTAAATGCATGACCCAGGAAGAACATATCCTTA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCCAGGCACACGTGTAAATGCATGACCCAGGAAGAACATATCCTTA  749

seq1  GGACCAAGTCCTTGTCTTCTCTGTGCCTCTTCCCCAAACCTTTTAGAAAT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCAAGTCCTTGTCTTCTCTGTGCCTCTTCCCCAAACCTTTTAGAAAT  799

seq1  CAACCTAATGTATCTATCTGTCATCAGGTACCAAAAAACTCAACATGGTC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTAATGTATCTATCTGTCATCAGGTACCAAAAAACTCAACATGGTC  849

seq1  TGGGAAGATGGCTCAGGAAAATGCTTGCAGCATGCTCATGAAGATCTGGG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGATGGCTCAGGAAAATGCTTGCAGCATGCTCATGAAGATCTGGG  899

seq1  TTTGATTCCCAGGATTCATATAAAAAGCCAGGAATGGTAGCACACACCTG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTCCCAGGATTCATATAAAAAGCCAGGAATGGTAGCACACACCTG  949

seq1  AGTCACAGCACTGGGGAGATAGAAATGGAAGGAGCCCTGAGGCTTGCTGG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACAGCACTGGGGAGATAGAAATGGAAGGAGCCCTGAGGCTTGCTGG  999

seq1  CCGGCTCTCTAGCCTAACTGTTGAATTC  1021
      ||||||||||||||||||||||||||||
seq2  CCGGCTCTCTAGCCTAACTGTTGAATTC  1027