BAC Information

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BAC

Clone NameB6Ng01-035M12
Chromosome1 (Build37)
Map Location 69,057,308 - 69,193,769
singlet/doubletdoublet
Overlap geneErbb4, LOC667842
Upstream genenone
Downstream geneEG241084, Ikzf2, Spag16
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035M12.bB6Ng01-035M12.g
ACCDH864157DH864158
length63494
definitionDH864157|Mus musculus domesticus DNA, BAC clone: B6Ng01-035M12, 5' end.DH864158|Mus musculus domesticus DNA, BAC clone: B6Ng01-035M12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,193,138 - 69,193,769)(69,057,308 - 69,057,401)
sequence
gaattcacagagactgaagcagcatggagagtatctgtaccaggtcctct
gcatatacattatggcttccagtttactgtttttatggaattcttgaggg
tgagaatcagtagggctctgatttaggtgacttctcttgggatcttttcc
ttcagttggtttgtcttgtccaactttgatgtgatagcttttgtttatct
tattttatatattctattttattttgtcaatttttgaatgaatgaatgaa
tgaatgaatgataatctagccatgaagtaaaggttaacaactgaactgtc
atgtacacactgagttgcaggaaaagggaagcatcactttttctaataca
ttgacactgggtgtatcaaccactccaggacatatctcttgttcataagt
agttcaccaacatacagtgcattcctcagtattttgtgtgcttttagttg
attacagtttgatgaggttttttatttgtttcttttgggatgtgctttta
tattgttgtcttggttttggggagttttgtggttgtattggtttttgctt
gtttgttttttgaggaggaactttaaattagctagggattgggtgatgtg
tctggaaagacttattgggagggaaaagaatatg
acttgccttttctgaaaatagacatcattctctcaaacagagaagttagc
aatgatgagagcaccaaggtgtgtgtgttggggggttggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_69193138_69193769
seq2: B6Ng01-035M12.b_48_681 (reverse)

seq1  CATATTCTTTTCCCTCCC-ATAAGTCCTTCCAGACACATCA-CCAATCCC  48
      |||||||||||||||||| ||||||| |||||||||||||| ||||||||
seq2  CATATTCTTTTCCCTCCCAATAAGTCTTTCCAGACACATCACCCAATCCC  50

seq1  TAGCTAATTTAAAGTTCCTCCTCAAAAAACAAACAAGCAAAAACCAATAC  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTAATTTAAAGTTCCTCCTCAAAAAACAAACAAGCAAAAACCAATAC  100

seq1  AACCACAAAACTCCCCAAAACCAAGACAACAATATAAAAGCACATCCCAA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACAAAACTCCCCAAAACCAAGACAACAATATAAAAGCACATCCCAA  150

seq1  AAGAAACAAATAAAAAACCTCATCAAACTGTAATCAACTAAAAGCACACA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACAAATAAAAAACCTCATCAAACTGTAATCAACTAAAAGCACACA  200

seq1  AAATACTGAGGAATGCACTGTATGTTGGTGAACTACTTATGAACAAGAGA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTGAGGAATGCACTGTATGTTGGTGAACTACTTATGAACAAGAGA  250

seq1  TATGTCCTGGAGTGGTTGATACACCCAGTGTCAATGTATTAGAAAAAGTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCCTGGAGTGGTTGATACACCCAGTGTCAATGTATTAGAAAAAGTG  300

seq1  ATGCTTCCCTTTTCCTGCAACTCAGTGTGTACATGACAGTTCAGTTGTTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTCCCTTTTCCTGCAACTCAGTGTGTACATGACAGTTCAGTTGTTA  350

seq1  ACCTTTACTTCATGGCTAGATTATCATTCATTCATTCATTCATTCATTCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTACTTCATGGCTAGATTATCATTCATTCATTCATTCATTCATTCA  400

seq1  AAAATTGACAAAATAAAATAGAATATATAAAATAAGATAAACAAAAGCTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTGACAAAATAAAATAGAATATATAAAATAAGATAAACAAAAGCTA  450

seq1  TCACATCAAAGTTGGACAAGACAAACCAACTGAAGGAAAAGATCCCAAGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATCAAAGTTGGACAAGACAAACCAACTGAAGGAAAAGATCCCAAGA  500

seq1  GAAGTCACCTAAATCAGAGCCCTACTGATTCTCACCCTCAAGAATTCCAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCACCTAAATCAGAGCCCTACTGATTCTCACCCTCAAGAATTCCAT  550

seq1  AAAAACAGTAAACTGGAAGCCATAATGTATATGCAGAGGACCTGGTACAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAGTAAACTGGAAGCCATAATGTATATGCAGAGGACCTGGTACAG  600

seq1  ATACTCTCCATGCTGCTTCAGTCTCTGTGAATTC  632
      ||||||||||||||||||||||||||||||||||
seq2  ATACTCTCCATGCTGCTTCAGTCTCTGTGAATTC  634

seq1: chr1_69057308_69057401
seq2: B6Ng01-035M12.g_71_164

seq1  ACTTGCCTTTTCTGAAAATAGACATCATTCTCTCAAACAGAGAAGTTAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCCTTTTCTGAAAATAGACATCATTCTCTCAAACAGAGAAGTTAGC  50

seq1  AATGATGAGAGCACCAAGGTGTGTGTGTTGGGGGGTTGGGGGGG  94
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATGAGAGCACCAAGGTGTGTGTGTTGGGGGGTTGGGGGGG  94