BAC Information

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BAC

Clone NameB6Ng01-036B07
Chromosome1 (Build37)
Map Location 102,499,087 - 102,500,049
singlet/doubletsinglet
Overlap genenone
Upstream geneC230078M14Rik, LOC633295, EG666200
Downstream geneLOC100041909, LOC100040993, LOC383650
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036B07.bB6Ng01-036B07.g
ACCDH864371DH864372
length1,213957
definitionDH864371|Mus musculus domesticus DNA, BAC clone: B6Ng01-036B07, 5' end.DH864372|Mus musculus domesticus DNA, BAC clone: B6Ng01-036B07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctatgttatctagtcactttgcttaaagtggttatcaggtgtat
gagttccctagtaaaaatgttaggatcatttatttatactaccatatctt
cctcaaataaaaatattttaatttcttccattacaatttgtatctccctt
tatctcttttagatatactatagttctagataaaacttcaagcattatat
taaatagattttgagagggtgaacaatcttgtcttttttcttactttagt
ataattgccttcagtttctttccatttaatttaatgttaggtataggttt
gatgtaacttgtcttgattgtgtttagatgtgttacttgtatccttatct
ttttacagaatttttatcaagatgatgtgttggattttgtcaaactgttt
tgttgtttttatttatttgcttgttttttgagattctaatggcatgacaa
tatgttttttccagtttattaaaatagtgcattatatttattaaatttag
tatatcaaatcatccttgcatctatgggatgaaacccatttaatcacagt
ggatattgatttttgacaagttcttggatacagattttgagtattttatt
tagtattttctcaatcaatattcataaggaaaatggtgtataaatcactt
tctgtgttgagtctttatgtggcttggatattaggataactgtggccttt
taaagtgaattgaggacctggggcacaagccccttccactccactcgagc
cctgggctaccttgccagcagagtctcgcccacacccgcaagggcccaca
caggactccccacgggatcctagacctctggtgagcggacacagcgcctg
actacccgggcctgatcttgggcacaagcccttccgatccctcgagcccc
gggctaccttggcagcggagtcgctgacactgcaagggccacaaggatcc
cacgggatctaagacctctatgagtgaaccacttctcaggattctgtcga
caccagattctgggtactcctgcaagaggaagtgcctacgggattctggc
actgaactaaggagtgctacttcagacacttagagctacgttactgaaga
cagccttcctgcactaacatctcgggtccgatgctaggacggacctagat
cagacctcatcgagcactcccagtcggtcatcgtactcagatactttctt
ggaaatggatcga
gaattcatgtagaggtcacaaagaagtgtggttactagtttgactcccat
gacttgcttacacagctttctaatagaacccaggaccagcagttcaaggg
tggtcacactcacatgatctgagtcttcccacatcaatctctaattaaga
aaatgcttagctacttcttgaccttaaagtgagacattttctcagttgag
acttcattgtctctgatggttcctagcttgagtcaagttcacacatctat
tgtgcacaggaatcaaactcagatcctcctgtttgcatggaaagtcaact
taactacagaacacctgtgtagccctgaacgtatcttcaatgtgaatttt
aattcaaaacatatatttttacctgtaaaaatgcaaaaatagtaatctat
atttttatactgatttacacatttaaagttttctcaatcctgtattcaac
atttcaagcagcactgctgaatgcttaaaaatttcactgattccttttaa
gcaaatatattaactgccaagaatcatagatcttcctcaaaaatagcagt
gcaatactctacagacaatctatgataatgaagaacaaccaacttgccat
tcagtcacaaatcatattcgtcatgctgcttcagagttctggcatgcagt
ctgtatttttcattaggactacattcaatatataaaatcaacttttgaga
ttaaagttttaagtgttttgctttttatactttattctagggtttgccat
atttttcattttagtattgtgcttgctggttttgtcaacttgacataggc
tggagtaatcagacaagagagaatcttaattgagaaaatgcatcagaaga
aggtttataggcaagcctagagaaattttaaaattagtgtgggatgtgga
gagccagccaatttggtttctatatggatgtgctgagcagcttgttgctg
tagcttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_102499087_102500049
seq2: B6Ng01-036B07.g_67_1023 (reverse)

seq1  CAAGCTACAAGCAACAGGCTTGCTCAGCACACTTCATTATAGAAACCAAA  50
      |||||||| ||||||| || |||||||||||  ||  |||||||||||||
seq2  CAAGCTAC-AGCAACAAGC-TGCTCAGCACA--TCCATATAGAAACCAAA  46

seq1  TTGGGCTTGGCTCTTCCACATCCACCACTAATTTTAAAATGTCCTCTAGG  100
      ||||   |||||| |||||||||  ||||||||||||||| | |||||||
seq2  TTGG--CTGGCTC-TCCACATCCCACACTAATTTTAAAAT-TTCTCTAGG  92

seq1  CTTGCCTATAAACCTATCTTCTGAATGCATTTTCTCAATTAAGATTCTCT  150
      ||||||||||||||| ||||||| ||||||||||||||||||||||||||
seq2  CTTGCCTATAAACCT-TCTTCTG-ATGCATTTTCTCAATTAAGATTCTCT  140

seq1  CTTGTCTGATTACTCCAGCCTATGTCAAGTTGACAAAACCAGCAAGCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCTGATTACTCCAGCCTATGTCAAGTTGACAAAACCAGCAAGCACA  190

seq1  ATTACTAAAATG-AAAATATGGCAAACCCTAGAAT-AAGTAT-AAAAGCA  247
      | |||||||||| |||||||||||||||||||||| |||||| |||||||
seq2  A-TACTAAAATGAAAAATATGGCAAACCCTAGAATAAAGTATAAAAAGCA  239

seq1  AAACACTTAAAACTTTAATCTCAAAAGTTGA-TTTATATATTGAATGTAG  296
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AAACACTTAAAACTTTAATCTCAAAAGTTGATTTTATATATTGAATGTAG  289

seq1  TCCTAATG-AAAATACAGACTGCATGCCAGAACTCTGAAGCAGCATGACG  345
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAATGAAAAATACAGACTGCATGCCAGAACTCTGAAGCAGCATGACG  339

seq1  AATATGATTTGTGACTGAATGGCAAGTTGGTTGTTCTTCATTATCATAGA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGATTTGTGACTGAATGGCAAGTTGGTTGTTCTTCATTATCATAGA  389

seq1  TTGTCTGTAGAGTATTGCACTGCTATTTTTGAGGAAGATCTATGATTCTT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTGTAGAGTATTGCACTGCTATTTTTGAGGAAGATCTATGATTCTT  439

seq1  GGCAGTTAATATATTTGCTTAAAAGGAATCAGTGAAATTTTTAAGCATTC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTTAATATATTTGCTTAAAAGGAATCAGTGAAATTTTTAAGCATTC  489

seq1  AGCAGTGCTGCTTGAAATGTTGAATACAGGATTGAGAAAACTTTAAATGT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTGCTGCTTGAAATGTTGAATACAGGATTGAGAAAACTTTAAATGT  539

seq1  GTAAATCAGTATAAAAATATAGATTACTATTTTTGCATTTTTACAGGTAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATCAGTATAAAAATATAGATTACTATTTTTGCATTTTTACAGGTAA  589

seq1  AAATATATGTTTTGAATTAAAATTCACATTGAAGATACGTTCAGGGCTAC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATATGTTTTGAATTAAAATTCACATTGAAGATACGTTCAGGGCTAC  639

seq1  ACAGGTGTTCTGTAGTTAAGTTGACTTTCCATGCAAACAGGAGGATCTGA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTGTTCTGTAGTTAAGTTGACTTTCCATGCAAACAGGAGGATCTGA  689

seq1  GTTTGATTCCTGTGCACAATAGATGTGTGAACTTGACTCAAGCTAGGAAC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGATTCCTGTGCACAATAGATGTGTGAACTTGACTCAAGCTAGGAAC  739

seq1  CATCAGAGACAATGAAGTCTCAACTGAGAAAATGTCTCACTTTAAGGTCA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGAGACAATGAAGTCTCAACTGAGAAAATGTCTCACTTTAAGGTCA  789

seq1  AGAAGTAGCTAAGCATTTTCTTAATTAGAGATTGATGTGGGAAGACTCAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTAGCTAAGCATTTTCTTAATTAGAGATTGATGTGGGAAGACTCAG  839

seq1  ATCATGTGAGTGTGACCACCCTTGAACTGCTGGTCCTGGGTTCTATTAGA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGTGAGTGTGACCACCCTTGAACTGCTGGTCCTGGGTTCTATTAGA  889

seq1  AAGCTGTGTAAGCAAGTCATGGGAGTCAAACTAGTAACCACACTTCTTTG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGTGTAAGCAAGTCATGGGAGTCAAACTAGTAACCACACTTCTTTG  939

seq1  TGACCTCTACATGAATTC  963
      ||||||||||||||||||
seq2  TGACCTCTACATGAATTC  957