BAC Information

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BAC

Clone NameB6Ng01-036F13
Chromosome1 (Build37)
Map Location 160,216,577 - 160,321,282
singlet/doubletdoublet
Overlap gene6430517E21Rik, Astn1
Upstream geneRasal2, Gabarapl2-ps1_1522.1, 2810025M15Rik, BC026585, Lztr2, LOC664935, LOC100039217
Downstream genePappa2, 4930562F17Rik, EG240853, LOC664972, Rfwd2, EG620484
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036F13.bB6Ng01-036F13.g
ACCDH864551DH864552
length710980
definitionDH864551|Mus musculus domesticus DNA, BAC clone: B6Ng01-036F13, 5' end.DH864552|Mus musculus domesticus DNA, BAC clone: B6Ng01-036F13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(160,216,577 - 160,217,286)(160,320,262 - 160,321,282)
sequence
gaattctaagctttctttgtctatgtttttttaaaaagtgctaagctaga
gagacagcctagtgattaagagtactttttgttctatgcagtgacatctc
tgctcaacaaagcctcttgttttggggacactcatgcttctggtcttctc
ctcttcctcacagtccattcacttgccctcctgtgtacatcacccactgg
ggctctctctatttcacttaagattgagtcacccagtcagcagaataagt
agagtccagttgtttttagcttggggcatggatgaggtagtaggattaga
atccataacttacactggtgtctaaaccttgatctgcaaacttaccctca
ctatcttgtagtacacacagacgtctctgatcctgcagagagacataagt
aaccgccatgggagtcaaacccctctcacagggatttttaatgcacccca
gacctctgccacacacaccaaatgaatgactctcctttattgatcttcct
ggagggctgacctccctgtacctggactgtcacctagcactcacttagac
actcactaaatcagtacccaatgtgcacaggccttgttgtgggccactcg
ctgttccaagctctgtgtactgaaataattttcttgtgggagatgcgggg
agctctgtagtgggagatatgcagcagaagctgaatgaagggggtgggga
gagagagaga
gaattcatcatgccttgtatgcagctggcctctgtgcttccaaggagcct
gagatgcacagattagtaatggattgcaaacgttaagaatgtcatttcat
caacactaagtgggttacattttcattccactgagtgccttcttgcttct
gaaacaagcccacaaagaagcagcacctagctgacctccgcaccactcat
tatccactcctgctccatctcaggggcctaatcagctctcccagccctga
tcctgatcgtgttagagcatactggtctcccaccctggagctctgcctaa
tatactactggaatcaacctaacctcagtggtggagaatcacaaggggtc
tgattctttgtacttgatttgagccaacggcacccctacctcacctgcac
tacacacacacacacacacacacacacacacacacacacacacacaccac
acacacacacacacacacacacacacacacacacacagaagtgactccgc
cagacactaaactgtcttttctctcttaccactttccaaaggacaatgag
aggggctatccaatttaatgctttaaagggacatgaaggaaatttattgt
ctcaggactgcacaaatcttcaaagaaaactccagtgaaaaacaatgagt
ttttatggcttaaaatattgattttcccacacacctctatgttttaaaat
accttgctgaatgttgctaagtatgcaaaactggtagaatgcataatatc
acctataggaagttagctttaacatacctgatgagaatagaggccggagt
tcaggtgaattatgacagttgattatgacatatgaggacacctccccctt
tctccttcaccccttcctcagtcttcaatgcatttaagagtgacatcgtg
ggatctaagacctttgctttacaggtcaggagcagtgacgtgtttactct
aaggacactacttctttctttgttgctggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_160216577_160217286
seq2: B6Ng01-036F13.b_41_750

seq1  GAATTCTAAGCTTTCTTTGTCTATGTTTTTTTAAAAAGTGCTAAGCTAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGCTTTCTTTGTCTATGTTTTTTTAAAAAGTGCTAAGCTAGA  50

seq1  GAGACAGCCTAGTGATTAAGAGTACTTTTTGTTCTATGCAGTGACATCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGCCTAGTGATTAAGAGTACTTTTTGTTCTATGCAGTGACATCTC  100

seq1  TGCTCAACAAAGCCTCTTGTTTTGGGGACACTCATGCTTCTGGTCTTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAACAAAGCCTCTTGTTTTGGGGACACTCATGCTTCTGGTCTTCTC  150

seq1  CTCTTCCTCACAGTCCATTCACTTGCCCTCCTGTGTACATCACCCACTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCTCACAGTCCATTCACTTGCCCTCCTGTGTACATCACCCACTGG  200

seq1  GGCTCTCTCTATTTCACTTAAGATTGAGTCACCCAGTCAGCAGAATAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTCTCTATTTCACTTAAGATTGAGTCACCCAGTCAGCAGAATAAGT  250

seq1  AGAGTCCAGTTGTTTTTAGCTTGGGGCATGGATGAGGTAGTAGGATTAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCCAGTTGTTTTTAGCTTGGGGCATGGATGAGGTAGTAGGATTAGA  300

seq1  ATCCATAACTTACACTGGTGTCTAAACCTTGATCTGCAAACTTACCCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATAACTTACACTGGTGTCTAAACCTTGATCTGCAAACTTACCCTCA  350

seq1  CTATCTTGTAGTACACACAGACGTCTCTGATCCTGCAGAGAGACATAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTTGTAGTACACACAGACGTCTCTGATCCTGCAGAGAGACATAAGT  400

seq1  AACCGCCATGGGAGTCAAACCCCTCTCACAGGGATTTTTAATGCACCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCGCCATGGGAGTCAAACCCCTCTCACAGGGATTTTTAATGCACCCCA  450

seq1  GACCTCTGCCACACACACCAAATGAATGACTCTCCTTTATTGATCTTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCTGCCACACACACCAAATGAATGACTCTCCTTTATTGATCTTCCT  500

seq1  GGAGGGCTGACCTCCCTGTACCTGGACTGTCACCTAGCACTCACTTAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGCTGACCTCCCTGTACCTGGACTGTCACCTAGCACTCACTTAGAC  550

seq1  ACTCACTAAATCAGTACCCAATGTGCACAGGCCTTGTTGTGGGCCACTCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTAAATCAGTACCCAATGTGCACAGGCCTTGTTGTGGGCCACTCG  600

seq1  CTGTTCCAAGCTCTGTGTACTGAAATAATTTTCTTGTGGGAGATGCGGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCCAAGCTCTGTGTACTGAAATAATTTTCTTGTGGGAGATGCGGGG  650

seq1  AGCTCTGTAGTGGGAGATATGCAGCAGAAGCTGAATGAAGGGGGTGGGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTGTAGTGGGAGATATGCAGCAGAAGCTGAATGAAGGGGGTGGGGA  700

seq1  GAGAGAGAGA  710
      ||||||||||
seq2  GAGAGAGAGA  710

seq1: chr1_160320262_160321282
seq2: B6Ng01-036F13.g_68_1047 (reverse)

seq1  ACCAGGCAACAAAG-AAGAAGTAGTGTCCTATGGGAGTAAACACGTCTAC  49
      |||| ||||||||| ||||||||||||||  |  |||||||||||||   
seq2  ACCA-GCAACAAAGAAAGAAGTAGTGTCC--TTAGAGTAAACACGTC--A  45

seq1  CTGCCTCCCCTGACCCTTTGTAAAAGCAAAAGTTCTTAGACTCCCACGAA  99
      |||   | |||||||   ||| ||||| |||| ||||||| ||||||| |
seq2  CTG---CTCCTGACC---TGT-AAAGC-AAAGGTCTTAGA-TCCCACG-A  85

seq1  TGTCACTTCTTTAATATTGCATTTGAAGACTGGAAGGAAGGGGTGGAAGG  149
      |||||| |||| ||   |||| ||||||||||  |||||||||| |||||
seq2  TGTCAC-TCTTAAA---TGCA-TTGAAGACTG--AGGAAGGGGT-GAAGG  127

seq1  AGAAAGGGGGAGGTGTGCCTTCATTATGTTCATAATTCATCTGTTCATAA  199
      ||||||||||||||||  | ||| |||| |||||| ||| ||| ||||||
seq2  AGAAAGGGGGAGGTGT--CCTCA-TATG-TCATAA-TCAACTG-TCATAA  171

seq1  TTCACCTGCATCTCCGGCCTCTTATTTCTCATCAGGTTATTGTTAAAGCT  249
      |||||||| | |||||||||||   ||||||||||||   ||||||||||
seq2  TTCACCTG-AACTCCGGCCTCT--ATTCTCATCAGGT--ATGTTAAAGCT  216

seq1  AACTTCCTATAGGGTGGATATTATTGCATTCTTACCAGTTTTTGCATTAC  299
      |||||||||||||   ||||||| ||||||| |||||| ||||||| |||
seq2  AACTTCCTATAGG--TGATATTA-TGCATTC-TACCAG-TTTTGCA-TAC  260

seq1  TTAGCAACATTCAGCAAGGTTATTTTTAAAACATAGAGGTGTGTGGGAAA  349
      ||||||||||||||||||||   |||||||||||||||||||||||||||
seq2  TTAGCAACATTCAGCAAGGT--ATTTTAAAACATAGAGGTGTGTGGGAAA  308

seq1  ATCAATATTTTAAGCCATAAAAACTCATTGTTTTTCACTGGAGTTTTCTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATATTTTAAGCCATAAAAACTCATTGTTTTTCACTGGAGTTTTCTT  358

seq1  TGAAGATTTGTGCAGTCCTGAGACAATAAATTTCCTTCATGTCCCTTTAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATTTGTGCAGTCCTGAGACAATAAATTTCCTTCATGTCCCTTTAA  408

seq1  AGCATTAAATTGGATAGCCCCTCTCATTGTCCTTTGGAAAGTGGTAAGAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTAAATTGGATAGCCCCTCTCATTGTCCTTTGGAAAGTGGTAAGAG  458

seq1  AGAAAAGACAGTTTAGTGTCTGGCGGAGTCACTTCTGTGTGTGTGTGTGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGACAGTTTAGTGTCTGGCGGAGTCACTTCTGTGTGTGTGTGTGT  508

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGGTGTGTGTGTGTGTGTGTGTGTGTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGGTGTGTGTGTGTGTGTGTGTGTGTG  558

seq1  TGTGTGTGTGTGTGTGTGTGTAGTGCAGGTGAGGTAGGGGTGCCGTTGGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTAGTGCAGGTGAGGTAGGGGTGCCGTTGGC  608

seq1  TCAAATCAAGTACAAAGAATCAGACCCCTTGTGATTCTCCACCACTGAGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATCAAGTACAAAGAATCAGACCCCTTGTGATTCTCCACCACTGAGG  658

seq1  TTAGGTTGATTCCAGTAGTATATTAGGCAGAGCTCCAGGGTGGGAGACCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTTGATTCCAGTAGTATATTAGGCAGAGCTCCAGGGTGGGAGACCA  708

seq1  GTATGCTCTAACACGATCAGGATCAGGGCTGGGAGAGCTGATTAGGCCCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGCTCTAACACGATCAGGATCAGGGCTGGGAGAGCTGATTAGGCCCC  758

seq1  TGAGATGGAGCAGGAGTGGATAATGAGTGGTGCGGAGGTCAGCTAGGTGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATGGAGCAGGAGTGGATAATGAGTGGTGCGGAGGTCAGCTAGGTGC  808

seq1  TGCTTCTTTGTGGGCTTGTTTCAGAAGCAAGAAGGCACTCAGTGGAATGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTTTGTGGGCTTGTTTCAGAAGCAAGAAGGCACTCAGTGGAATGA  858

seq1  AAATGTAACCCACTTAGTGTTGATGAAATGACATTCTTAACGTTTGCAAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTAACCCACTTAGTGTTGATGAAATGACATTCTTAACGTTTGCAAT  908

seq1  CCATTACTAATCTGTGCATCTCAGGCTCCTTGGAAGCACAGAGGCCAGCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTACTAATCTGTGCATCTCAGGCTCCTTGGAAGCACAGAGGCCAGCT  958

seq1  GCATACAAGGCATGATGAATTC  1021
      ||||||||||||||||||||||
seq2  GCATACAAGGCATGATGAATTC  980