BAC Information

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BAC

Clone NameB6Ng01-036H15
Chromosome1 (Build37)
Map Location 29,318,961 - 29,319,961
singlet/doubletsinglet
Overlap genenone
Upstream geneEG665903, Gm597, LOC435614, EG623924
Downstream geneEG433283, LOC100040665, LOC665944
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036H15.bB6Ng01-036H15.g
ACCDH864642DH864643
length99064
definitionDH864642|Mus musculus domesticus DNA, BAC clone: B6Ng01-036H15, 5' end.DH864643|Mus musculus domesticus DNA, BAC clone: B6Ng01-036H15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctataagaaagtttagtaatgttgaagaaatagaagcccaaattt
gtcattttgtaacttctgccatgtgacagatttaacagttgttctttgtg
tagctttgggattagaaccatctacaggaatctgttgggtagtgcaacct
agtgtttgcaccacttaagatagaagctctctttctcacaacttctatca
gtgacctatatttcatctgtagtgactgaggatcttaagagcttttctat
attcttgactgatcaatgacatggcatgtcttggatagatgcattgcaag
gaatcaaaactactgtgaatttgtggtataagttgactatgtcttgtcta
gaatgctgagatttatggttttaaccataccacctagacctttgtttctt
cctgctcactcttctgtaatcctttatgagatttggaagttgtagtctaa
ataagttggaatatagtatcccaaaactggtcaaattatcattaacaacc
caagcataattctgctacatgtagataacacaggaaactaaaattattgc
aaaactacaagcaacaaaaaatttaaaaccgtaacaaatttgtgagtggg
caggcatgtaatcatgcatttgcctgtggtttagtgactttgggtcacag
agacactgtgtggaatgtggcatgtgtactgcttcttctattaaattacc
ttttttctcataagaaaataatagctgtcactattcaataatcacttaca
ttaaatatcttattcgtgttccaaattatatctgtctctccaaattttta
agtgataataagatccctgttttgttagaaagagaatttatagttctact
tattttctttcagcacagtttaccttttctaaataaaagtcagctgggac
tgttatgctctcatatttgtagcaatctagaatttgggtcatctcgaaat
catgaatttatgtgactttcaattctcagaaccaaataaa
cagggccaggaatcaggagtgggcaggttggggagcggggtgggggggca
gggtattgggagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_29318961_29319961
seq2: B6Ng01-036H15.b_43_1032 (reverse)

seq1  TTTATTTGGTTCTTGAGAATTGAAAGTCACCATAAATTCATGAATTCTGA  50
      |||||||||||| |||||||||||||||| ||||||||||||| ||| ||
seq2  TTTATTTGGTTC-TGAGAATTGAAAGTCA-CATAAATTCATGATTTC-GA  47

seq1  GATGACACAAATTTCTAGATATGCTACAAATATGAGAGACATAACAGTAC  100
      |||||| |||| |||||||| ||||||||||||||||| ||||||||| |
seq2  GATGACCCAAA-TTCTAGAT-TGCTACAAATATGAGAG-CATAACAGT-C  93

seq1  CCAGCTGACTTTTATTTTAGAAAAGGTAAACTGTGCTGAAATGAAAATAC  150
      |||||||||||||| |||||||||||||||||||||||||| ||||||| 
seq2  CCAGCTGACTTTTA-TTTAGAAAAGGTAAACTGTGCTGAAA-GAAAATAA  141

seq1  GTTAGAACCTATAAAATTCTCCTTCTAACAAAACAGGGATCTTATTATCA  200
      | ||||| |||| |||||||| ||||||||||||||||||||||||||||
seq2  G-TAGAA-CTAT-AAATTCTCTTTCTAACAAAACAGGGATCTTATTATCA  188

seq1  CTT-AAAATTTGGAGAGACAGATATAATTTGGAACACGAATAAGATATTT  249
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAAATTTGGAGAGACAGATATAATTTGGAACACGAATAAGATATTT  238

seq1  AATGTAAGTGATTATTGAATAGTGACAGCTATTATTTTCTTATGAG-AAA  298
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AATGTAAGTGATTATTGAATAGTGACAGCTATTATTTTCTTATGAGAAAA  288

seq1  AAGGTAATTTAATAGAAAGAAGCAGTACACATGCCACATTCCACACAGTG  348
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AAGGTAATTTAATAG-AAGAAGCAGTACACATGCCACATTCCACACAGTG  337

seq1  TCTCTGTGACCCAAAGTCACTAAACCACAGGCAAATGCATGATTACATGC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTGACCCAAAGTCACTAAACCACAGGCAAATGCATGATTACATGC  387

seq1  CTGCCCACTCACAAATTTGTTACGGTTTTAAATTTTTTGTTGCTTGTAGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCACTCACAAATTTGTTACGGTTTTAAATTTTTTGTTGCTTGTAGT  437

seq1  TTTGCAATAATTTTAGTTTCCTGTGTTATCTACATGTAGCAGAATTATGC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAATAATTTTAGTTTCCTGTGTTATCTACATGTAGCAGAATTATGC  487

seq1  TTGGGTTGTTAATGATAATTTGACCAGTTTTGGGATACTATATTCCAACT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTTGTTAATGATAATTTGACCAGTTTTGGGATACTATATTCCAACT  537

seq1  TATTTAGACTACAACTTCCAAATCTCATAAAGGATTACAGAAGAGTGAGC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAGACTACAACTTCCAAATCTCATAAAGGATTACAGAAGAGTGAGC  587

seq1  AGGAAGAAACAAAGGTCTAGGTGGTATGGTTAAAACCATAAATCTCAGCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAAACAAAGGTCTAGGTGGTATGGTTAAAACCATAAATCTCAGCA  637

seq1  TTCTAGACAAGACATAGTCAACTTATACCACAAATTCACAGTAGTTTTGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGACAAGACATAGTCAACTTATACCACAAATTCACAGTAGTTTTGA  687

seq1  TTCCTTGCAATGCATCTATCCAAGACATGCCATGTCATTGATCAGTCAAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTGCAATGCATCTATCCAAGACATGCCATGTCATTGATCAGTCAAG  737

seq1  AATATAGAAAAGCTCTTAAGATCCTCAGTCACTACAGATGAAATATAGGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAGAAAAGCTCTTAAGATCCTCAGTCACTACAGATGAAATATAGGT  787

seq1  CACTGATAGAAGTTGTGAGAAAGAGAGCTTCTATCTTAAGTGGTGCAAAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGATAGAAGTTGTGAGAAAGAGAGCTTCTATCTTAAGTGGTGCAAAC  837

seq1  ACTAGGTTGCACTACCCAACAGATTCCTGTAGATGGTTCTAATCCCAAAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGTTGCACTACCCAACAGATTCCTGTAGATGGTTCTAATCCCAAAG  887

seq1  CTACACAAAGAACAACTGTTAAATCTGTCACATGGCAGAAGTTACAAAAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACAAAGAACAACTGTTAAATCTGTCACATGGCAGAAGTTACAAAAT  937

seq1  GACAAATTTGGGCTTCTATTTCTTCAACATTACTAAACTTTCTTATAGAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAATTTGGGCTTCTATTTCTTCAACATTACTAAACTTTCTTATAGAA  987

seq1  TTC  1001
      |||
seq2  TTC  990