BAC Information

Click to search

BAC

Clone NameB6Ng01-036J12
Chromosome1 (Build37)
Map Location 103,343,551 - 103,344,192
singlet/doubletsinglet
Overlap genenone
Upstream geneC230078M14Rik, LOC100041909, LOC100040993, LOC383650
Downstream geneLOC100041056
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036J12.bB6Ng01-036J12.g
ACCDH864718DH864719
length9451,074
definitionDH864718|Mus musculus domesticus DNA, BAC clone: B6Ng01-036J12, 5' end.DH864719|Mus musculus domesticus DNA, BAC clone: B6Ng01-036J12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgggtttacaaagttggactttggtatacttattacattaaag
tattttatgttcccaatatgtgtgttctgctttcttaggaaatatatcac
acaactctataatgccaaaatataaaattttaggctcttgtgagaactga
aggtatgattaatacggagaggaagaagcatcctacaggcaagtagatca
atggagaaatgaacccacacatgtaaggtcacttgatctgtgacaaagga
gctaaagccatccagtggtaaaaagacagcatttttaacaaattgtgcta
gttcaactggaggtcagcatgtagaataatgcaaattgatccattcttat
ctccttgtacaaagctcaaatccaagtggatcaaggacctccacataaaa
ccagaggcactgaaactaatagaatagaaactggggaaatacctccaaca
tataggcacatgggaacatttcctgaacagaacaccagtggcttatgctc
taatatcaacaacagacaaatgtgtcctcataaaattgcaaagcttcttt
gtacagagacagatatgttgatcaatggaatacggtagaagacccataaa
taaaagcacacacttaaggaaacttaatatttgacaaagaagccaaaata
tacaatgaaaagagaaggtatcttcaataattggtgctggtctagtggat
gctggcctaattagcagtttgtatgtagaaaaatgaaaatagaccaatat
ttgtcatcttttacaaaactcaagtcccagtggatcaaggatctcagtat
aaaaccagatatactgaatctaaaaagagaagtggaaagagccttgaact
cattggcacaggggaaatttcctcaacagactccataactcatgctctag
atcaagattgataatgggactcatgactgaaagctctgtaagaaa
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaatgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgatttct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtagcttcataaaatgagttg
ggtagagtaccttctacttctatcttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttagaggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtataagcttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttgat
taggattttgtccctttgccctctagtgagtctagctaaaggcttatcta
tcttgttgattttttcaaagaagcaactcctcgtttggtaattctttgaa
tagttcttcttgtttccacttgttaatttcaccctgagtttgatatttcc
tgccgtctactctcttgggtgaattgcttccttttttctaaagctttaga
tggtgttgtcagctgctagatgggctctcctcgttcttctgagtactcag
agctatgattccctctagaatgctttcatgtgtccaaaggttggtacgtg
gggctccttcatatcagaagctttaatcttttatctgctgacaagatctt
gaaaaagggatccttcacgaatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_103343551_103344192
seq2: B6Ng01-036J12.b_46_687 (reverse)

seq1  CTTCTTTGTCAAATATTAAGTTTCCTTAAGTGTGTGCTTTTATTTATGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTGTCAAATATTAAGTTTCCTTAAGTGTGTGCTTTTATTTATGGG  50

seq1  TCTTCTACCGTATTCCATTGATCAACATATCTGTCTCTGTACAAAGAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTACCGTATTCCATTGATCAACATATCTGTCTCTGTACAAAGAAGC  100

seq1  TTTGCAATTTTATGAGGACACATTTGTCTGTTGTTGATATTAGAGCATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAATTTTATGAGGACACATTTGTCTGTTGTTGATATTAGAGCATAA  150

seq1  GCCACTGGTGTTCTGTTCAGGAAATGTTCCCATGTGCCTATATGTTGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTGGTGTTCTGTTCAGGAAATGTTCCCATGTGCCTATATGTTGGAG  200

seq1  GTATTTCCCCAGTTTCTATTCTATTAGTTTCAGTGCCTCTGGTTTTATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTCCCCAGTTTCTATTCTATTAGTTTCAGTGCCTCTGGTTTTATGT  250

seq1  GGAGGTCCTTGATCCACTTGGATTTGAGCTTTGTACAAGGAGATAAGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTCCTTGATCCACTTGGATTTGAGCTTTGTACAAGGAGATAAGAAT  300

seq1  GGATCAATTTGCATTATTCTACATGCTGACCTCCAGTTGAACTAGCACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCAATTTGCATTATTCTACATGCTGACCTCCAGTTGAACTAGCACAA  350

seq1  TTTGTTAAAAATGCTGTCTTTTTACCACTGGATGGCTTTAGCTCCTTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTAAAAATGCTGTCTTTTTACCACTGGATGGCTTTAGCTCCTTTGT  400

seq1  CACAGATCAAGTGACCTTACATGTGTGGGTTCATTTCTCCATTGATCTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGATCAAGTGACCTTACATGTGTGGGTTCATTTCTCCATTGATCTAC  450

seq1  TTGCCTGTAGGATGCTTCTTCCTCTCCGTATTAATCATACCTTCAGTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTGTAGGATGCTTCTTCCTCTCCGTATTAATCATACCTTCAGTTCT  500

seq1  CACAAGAGCCTAAAATTTTATATTTTGGCATTATAGAGTTGTGTGATATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGAGCCTAAAATTTTATATTTTGGCATTATAGAGTTGTGTGATATA  550

seq1  TTTCCTAAGAAAGCAGAACACACATATTGGGAACATAAAATACTTTAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTAAGAAAGCAGAACACACATATTGGGAACATAAAATACTTTAATG  600

seq1  TAATAAGTATACCAAAGTCCAACTTTGTAAACCCAAGAATTC  642
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAGTATACCAAAGTCCAACTTTGTAAACCCAAGAATTC  642