BAC Information

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BAC

Clone NameB6Ng01-037C01
Chromosome1 (Build37)
Map Location 64,419,588 - 64,420,719
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042638, Adam23, Gm215, Mdh1b, Fastkd2, 4933402D24Rik, LOC671842, OTTMUSG00000013918, Klf7, Ppia-ps1_583.1
Downstream geneLOC100043124, Creb1, 2310038H17Rik, Ccnyl1, Fzd5, 9430067K14Rik, LOC667245, LOC100043141, 4921521F21Rik, LOC667276, Cryge, Crygd, Crygc, Crygb, LOC654356, Cryga, D630023F18Rik, Idh1, Pip5k3, Pthr2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037C01.bB6Ng01-037C01.g
ACCDH865097DH865098
length1,1851,133
definitionDH865097|Mus musculus domesticus DNA, BAC clone: B6Ng01-037C01, 5' end.DH865098|Mus musculus domesticus DNA, BAC clone: B6Ng01-037C01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcatctgagagttcatatgactccgtccacttactggca
gtcaatggtaccttgatttgtctttagcaacaacacgttttattgttcta
atacggatggccatgcatcagtgtctgtacactgaagaactactttgcag
tctggtttcatctgggaatctattccagaagtaagcccattgagaaattc
taggcagggcttctgtgctaatttcttttcttattgctgtggcaaaatgc
cctgacaaagacaacttaagggagtaaggacttactttggctcatagttg
gaggataaagtccatcatgggagagaagtcaaggtgaggagggaaaggaa
acagcttttcacactgcatttggaagtaggagacagagagtggttaatgc
ctgtgcctacctctcctcctcccttttatgcagtctagaatccaattcca
agaaatgacaactcaagtggcattcccatttcaattgacctaatcaagat
gatcccccactatactggctagttttgacacagctggagttatcaaaaaa
aaaaaaaaaaaggagcttcagttgaggaaatgcctccatgagatccaact
gtaaagcatttcctcaattagtgatcaagggggaaaggccccttgtgggt
gggaccatccctgggctggtagtcttgggttctataagagagcaggctga
gcaagccaggggaagcaagccatggcctctgaatcagctcctgcttcgtg
acctgcttgagttccaggcctgacttccttgatgatgaacagcagtatgg
aagtgcaagccaaataaaccctttcctccccaactgcttcttggtcatga
cgtttgtgcaggaatagaaaccctgactaagacacccacagacatattct
gggacctgtgttctaggtagttctagatctcattaagttgataatgtgat
tagctattacagcatctgtgtgttcagaggcccttgatccctgtaatgta
tagtgctaggggggtcctaagccatatggggaactgtactagctagaatc
cttctcttcttcccatccctcctctttctacttcttccttctacttctgc
ttttctttttgtcacccgcgtatctttattccatcatgactccctgagta
tatgactatctttattcacagctcgcatttcccca
gaattctctgccacatgcagataaatataaggcactttggtgcttttaac
acaatcccagagggcctcctagaggagatgacttttaaggtagatatgat
cagaaaagcaaagtgtggcagacaatcttagtaagcatgaagataatcta
gaaataaagggtcagtgacgacataggacatggtatgatatgggtgccac
caggctggagcacaagctccatcaagggaagaatgaaagaatgcacaagt
ttcagtagacttcaggaagcctgctgatgcgtggaagaaacacagataca
ttacctttggctcattcttcagagaaaactgctaggaaaacatctttgtg
ttcagtgtgttgatgataaagtaaccaggttgtacaaaccatgacatgga
ctcaggtattccatcataaactaaaaactgtgtctctctggtccctccac
cactagcagcttcagagtcacatactaaagcttatgtcccaatgggatag
aatctgggaggtaattatgcctagatatagtctcggatataagactccag
tgtgcgaataagactctgataaaaagaggaaaggccaggaagatggctca
gtcagtaaagtgcttacttgccttgtaagcataaggaccttaggtcaaat
aatccagaactcagtccagttatgggggtcagagagaagcaggtttcttc
gctctctggccagctaacttggccatggtaaagttccagaccaatcagaa
accttgtctcaaaaggtagaagatgatgcagaagcaatacctgaagtttc
ccttcaacctgtgtacatgtacatacacacacacacacacacacacacac
acacacacatatgcgcacacttatacacagatgggaagaaattacaaagc
ttcctcttctgccatggtgatcatatattgagaaggtaggcagaaaccaa
atgagatagcagctgatctgagactttcagactccacacttgaaagaatg
tttctgttgtttaagcctaatcctccaggggggtgtgccatgctgtgaaa
ctactaaagtgcctctccttcactcccggtagtcttaattgggggggact
cagggctggtacttccgtctgtggcttccgcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_64419588_64420719
seq2: B6Ng01-037C01.g_67_1199

seq1  GAATTCTCTGCCACATGCAGATAAATATAAGGCACTTTGGTGCTTTTAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGCCACATGCAGATAAATATAAGGCACTTTGGTGCTTTTAAC  50

seq1  ACAATCCCAGAGGGCCTCCTAGAGGAGATGACTTTTAAGGTAGATATGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCCCAGAGGGCCTCCTAGAGGAGATGACTTTTAAGGTAGATATGAT  100

seq1  CAGAAAAGCAAAGTGTGGCAGACAATCTTAGTAAGCATGAAGATAATCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAGCAAAGTGTGGCAGACAATCTTAGTAAGCATGAAGATAATCTA  150

seq1  GAAATAAAGGGTCAGTGACGACATAGGACATGGTATGATATGGGTGCCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAAAGGGTCAGTGACGACATAGGACATGGTATGATATGGGTGCCAC  200

seq1  CAGGCTGGAGCACAAGCTCCATCAAGGGAAGAATGAAAGAATGCACAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTGGAGCACAAGCTCCATCAAGGGAAGAATGAAAGAATGCACAAGT  250

seq1  TTCAGTAGACTTCAGGAAGCCTGCTGATGCGTGGAAGAAACACAGATACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTAGACTTCAGGAAGCCTGCTGATGCGTGGAAGAAACACAGATACA  300

seq1  TTACCTTTGGCTCATTCTTCAGAGAAAACTGCTAGGAAAACATCTTTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTTTGGCTCATTCTTCAGAGAAAACTGCTAGGAAAACATCTTTGTG  350

seq1  TTCAGTGTGTTGATGATAAAGTAACCAGGTTGTACAAACCATGACATGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTGTGTTGATGATAAAGTAACCAGGTTGTACAAACCATGACATGGA  400

seq1  CTCAGGTATTCCATCATAAACTAAAAACTGTGTCTCTCTGGTCCCTCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGTATTCCATCATAAACTAAAAACTGTGTCTCTCTGGTCCCTCCAC  450

seq1  CACTAGCAGCTTCAGAGTCACATACTAAAGCTTATGTCCCAATGGGATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGCAGCTTCAGAGTCACATACTAAAGCTTATGTCCCAATGGGATAG  500

seq1  AATCTGGGAGGTAATTATGCCTAGATATAGTCTCGGATATAAGACTCCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGGGAGGTAATTATGCCTAGATATAGTCTCGGATATAAGACTCCAG  550

seq1  TGTGCGAATAAGACTCTGATAAAAAGAGGAAAGGCCAGGAAGATGGCTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCGAATAAGACTCTGATAAAAAGAGGAAAGGCCAGGAAGATGGCTCA  600

seq1  GTCAGTAAAGTGCTTACTTGCCTTGTAAGCATAAGGACCTTAGGTCAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTAAAGTGCTTACTTGCCTTGTAAGCATAAGGACCTTAGGTCAAAT  650

seq1  AATCCAGAACTCAGTCCAGTTATGGGGGTCAGAGAGAAGCAGGTTTCTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAGAACTCAGTCCAGTTATGGGGGTCAGAGAGAAGCAGGTTTCTTC  700

seq1  GCTCTCTGGCCAGCTAACTTGGCCATGGTAAAGTTCCAGACCAATCAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTGGCCAGCTAACTTGGCCATGGTAAAGTTCCAGACCAATCAGAA  750

seq1  ACCTTGTCTCAAAAGGTAGAAGATGATGCAGAAGCAATACCTGAAGTTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGTCTCAAAAGGTAGAAGATGATGCAGAAGCAATACCTGAAGTTTC  800

seq1  CCTTCAACCTGTGTACATGTACATACACACACACACACACACACACACAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAACCTGTGTACATGTACATACACACACACACACACACACACACAC  850

seq1  ACACACACATATGCGCACACATTATACACAGATGGGAAGAGATACCAAAG  900
      |||||||||||||||||||| ||||||||||||||||||| ||  |||||
seq2  ACACACACATATGCGCACAC-TTATACACAGATGGGAAGAAATTACAAAG  899

seq1  CTTCCTCTTCTGCCAT-GTGATCATATATTGAGAAGGTAAGCCAGAAACC  949
      |||||||||||||||| ||||||||||||||||||||| || ||||||||
seq2  CTTCCTCTTCTGCCATGGTGATCATATATTGAGAAGGT-AGGCAGAAACC  948

seq1  AAATGAGATAGCAGCTGATCTGAGACTTTCAGACTCCACAACTTGAGAGA  999
      ||||||||||||||||||||||||||||||||||||||| |||||| |||
seq2  AAATGAGATAGCAGCTGATCTGAGACTTTCAGACTCCAC-ACTTGAAAGA  997

seq1  ATGTTTCTGTTGTTTAAGCCTAAT-CTCCAGGGGGTTGTTGCCATGCTGT  1048
      |||||||||||||||||||||||| |||||||||| || |||||||||||
seq2  ATGTTTCTGTTGTTTAAGCCTAATCCTCCAGGGGGGTG-TGCCATGCTGT  1046

seq1  GAGACTACTAAAGTGCTTCTCTTTCACTCCCGTTAGTCTTAAT--GTGGT  1096
      || ||||||||||||| |||| |||||||||| ||||||||||  | || 
seq2  GAAACTACTAAAGTGCCTCTCCTTCACTCCCGGTAGTCTTAATTGGGGGG  1096

seq1  GACTCA-GGCTGGTCCTTCTGTCTGTGGCTTCAGCCT  1132
      |||||| ||||||| |||| |||||||||||| ||||
seq2  GACTCAGGGCTGGTACTTCCGTCTGTGGCTTCCGCCT  1133