BAC Information

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BAC

Clone NameB6Ng01-037E14
Chromosome1 (Build37)
Map Location 21,960,303 - 22,124,941
singlet/doubletdoublet
Overlap geneLOC435612
Upstream geneEfhc1, Tram2, LOC100040291, Tmem14a, Gsta3, EG632802, EG241041, LOC100040309, Ndg1, BC099381, LOC100040319, AU024076, Kcnq5, D1Mgi28
Downstream geneLOC100040338, Rims1, Rims1, EG665725, LOC665731, 4933415F23Rik, Rn4.5s-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037E14.bB6Ng01-037E14.g
ACCDH865211DH865212
length516488
definitionDH865211|Mus musculus domesticus DNA, BAC clone: B6Ng01-037E14, 5' end.DH865212|Mus musculus domesticus DNA, BAC clone: B6Ng01-037E14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,124,420 - 22,124,941)(21,960,303 - 21,960,796)
sequence
aatgtgatcccagtcacagtggctatcagcatgaaaggaaatgacagtaa
gtgcacataaggcggtaagtgtggggaggagatccccactcttaaatgtt
gacgggctttaaactggtgcagttactacataaagcacatttcccaaaaa
ctaaaactgaatcaccacatgacctggctctattacttttgggcatatac
cagaaagattctatatcatacctcagagacatttgtacattgtgtttatt
tctgtgcttcacactagcaaagaaatagaataagcccaaatgcctttcag
cagataaattaataataaacacatggcttatatacgcaataacattttat
tcagtgtaaaggaaaatgaaatcatgaaatgtgcaggaaaatagatgaaa
cttgaaaatactttgttttaaatgatgtaaaccaggttcagacagatgaa
caccacgtttaccttctcacatgcagatctgactttgtaattttagtatg
gtggttattaattatg
cacactaagactattgaaagctagagaagagagtgaggcaggtttgcagt
tggtagaataaaggacattcaagttcctggagtgtcaatcaaaagtatgt
tttatcatttatatatgtgttgaagtgttaaaattttagtaacagaaagt
ctgtttaaattatgtttgaacattatcaaaatcaaaaaataaccctgttt
gttggggttctgaattttatataaataatcctgtcttttatactcatgga
tcagatacaaaatgaccaaaatgacccattagtgtcaaaaagaagaaact
aatgaggggcatgtgggcagccttgagattatggctaccctgagatcctt
agttctttggcttagatatcccagattgtgccaagggttaggaagaaaat
ccaaggaagagcccctgaactttgttgggatcttgctactcaaaatagtt
cattggaataagaagcaattgtcctgaaaaagtgcagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_22124420_22124941
seq2: B6Ng01-037E14.b_34_555 (reverse)

seq1  CATAATTAATAACCACCATACTAAAATTACAAAGTCAGATCTGCATGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATTAATAACCACCATACTAAAATTACAAAGTCAGATCTGCATGTGA  50

seq1  GAAGGTAAACGTGGTGTTCATCTGTCTGAACCTGGTTTACCTCATTTAAA  100
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GAAGGTAAACGTGGTGTTCATCTGTCTGAACCTGGTTTACATCATTTAAA  100

seq1  ACAAAGTATTTTCAAGTTTCATCTATTTTCCTGCACATTTCATGATTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGTATTTTCAAGTTTCATCTATTTTCCTGCACATTTCATGATTTCA  150

seq1  TTTTCCTTTACACTGAATAAAATGTTATTGCGTATATAAGCCATGTGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTTTACACTGAATAAAATGTTATTGCGTATATAAGCCATGTGTTT  200

seq1  ATTATTAATTTATCTGCTGAAAGGCATTTGGGCTTATTCTATTTCTTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTAATTTATCTGCTGAAAGGCATTTGGGCTTATTCTATTTCTTTGC  250

seq1  TAGTGTGAAGCACAGAAATAAACACAATGTACAAATGTCTCTGAGGTATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTGAAGCACAGAAATAAACACAATGTACAAATGTCTCTGAGGTATG  300

seq1  ATATAGAATCTTTCTGGTATATGCCCAAAAGTAATAGAGCCAGGTCATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGAATCTTTCTGGTATATGCCCAAAAGTAATAGAGCCAGGTCATGT  350

seq1  GGTGATTCAGTTTTAGTTTTTGGGAAATGTGCTTTATGTAGTAACTGCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATTCAGTTTTAGTTTTTGGGAAATGTGCTTTATGTAGTAACTGCAC  400

seq1  CAGTTTAAAGCCCGTCAACATTTAAGAGTGGGGATCTCCTCCCCACACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTAAAGCCCGTCAACATTTAAGAGTGGGGATCTCCTCCCCACACTT  450

seq1  ACCGCCTTATGTGCACTTACTGTCATTTCCTTTCATGCTGTTAGCCACTG  500
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ACCGCCTTATGTGCACTTACTGTCATTTCCTTTCATGCTGATAGCCACTG  500

seq1  TGACTGGGATCACATTGAATTC  522
      ||||||||||||||||||||||
seq2  TGACTGGGATCACATTGAATTC  522

seq1: chr1_21960303_21960796
seq2: B6Ng01-037E14.g_71_564

seq1  GAATTCCACACTAAGACTATTGAAAGCTAGAGAAGAGAGTGAGGCAGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACACTAAGACTATTGAAAGCTAGAGAAGAGAGTGAGGCAGGTT  50

seq1  TGCAGTTGGTAGAATAAAGGACATTCAAGTTCCTGGAGTGTCAATCAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTTGGTAGAATAAAGGACATTCAAGTTCCTGGAGTGTCAATCAAAA  100

seq1  GTATGTTTTATCATTTATATATGTGTTGAAGTGTTAAAATTTTAGTAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTTTTATCATTTATATATGTGTTGAAGTGTTAAAATTTTAGTAACA  150

seq1  GAAAGTCTGTTTAAATTATGTTTGAACATTATCAAAATCAAAAAATAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTCTGTTTAAATTATGTTTGAACATTATCAAAATCAAAAAATAACC  200

seq1  CTGTTTGTTGGGGTTCTGAATTTTATATAAATAATCCTGTCTTTTATACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTGTTGGGGTTCTGAATTTTATATAAATAATCCTGTCTTTTATACT  250

seq1  CATGGATCAGATACAAAATGACCAAAATGACCCATTAGTGTCAAAAAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGATCAGATACAAAATGACCAAAATGACCCATTAGTGTCAAAAAGAA  300

seq1  GAAACTAATGAGGGGCATGTGGGCAGCCTTGAGATTATGGCTACCCTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTAATGAGGGGCATGTGGGCAGCCTTGAGATTATGGCTACCCTGAG  350

seq1  ATCCTTAGTTCTTTGGCTTAGATATCCCAGATTGTGCCAAGGGTTAGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTAGTTCTTTGGCTTAGATATCCCAGATTGTGCCAAGGGTTAGGAA  400

seq1  GAAAATCCAAGGAAGAGCCCCTGAACTTTGTTGGGATCTTGCTACTCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCCAAGGAAGAGCCCCTGAACTTTGTTGGGATCTTGCTACTCAAA  450

seq1  ATAGTTCATTGGAATAAGAAGCAATTGTCCTGAAAAAGTGCAGG  494
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTCATTGGAATAAGAAGCAATTGTCCTGAAAAAGTGCAGG  494