BAC Information

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BAC

Clone NameB6Ng01-037L17
Chromosome1 (Build37)
Map Location 184,259,403 - 184,421,181
singlet/doubletdoublet
Overlap geneFbxo28, LOC435657, ENSMUSG00000073482, Trp53bp2, Capn2
Upstream geneCnih3, Ccdc121, A230079K17Rik, Lbr, EG433384, Enah, Srp9, EG625823, Degs1, 1700047M11Rik
Downstream geneLOC666624, Capn8, 4922505E12Rik, Susd4, Tlr5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037L17.bB6Ng01-037L17.g
ACCDH865504DH865505
length595327
definitionDH865504|Mus musculus domesticus DNA, BAC clone: B6Ng01-037L17, 5' end.DH865505|Mus musculus domesticus DNA, BAC clone: B6Ng01-037L17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(184,420,587 - 184,421,181)(184,259,403 - 184,259,730)
sequence
gaattcccccttcaggatcaatgggtgctatgaagcactctcagggggtg
ccaccacggaaggctttgaagacttcacaggaggcattgctgagtggtat
gagctgaggaagcctcctcccaacttgttcaagatcatccagaaggcttt
ggagaaaggttctctgcttggctgctctatcgatgtaagtctccatcacc
ctccgcaagcactcaagtccgccgccacccataagctccttaaggcatgg
gtgcatcccttgcccagggtcaccaggcaatagtcctctaggggcgccat
tgatacagtaacagtgccaccagaccttcatccccatcccactttccatt
ctaactgtgttgtatcactccactcacagaccgcaggtcacaaaaagccc
cccaccccccttctgctggtcttgacaccttgtccggcacctgcagggtt
gtttgagcagccctgcaacctctcctcactctgtcccagtgctggtgggt
cctggagaagacgccagggagtaccagaaggatctgcttcttcaaaatag
ctttgcaggcaaacaaacctcaccagggagatggaaagtgaggct
cttatagacatgaggagttgcttttgaatgttagaaatccagctgaggct
ggacaagttaagaacaagtgtccttaactgctgagccatctctccagccc
tcttttttaaaaacttgagacagggtttctctgtgtagccttggctgtcc
tggaacttgctctgtagaccaggctggcctcaaactcaagaattcgtctg
gctcagcctccccattatgtgggtcaccactgcccggggaagattattca
tttctagtgtacttctagctgacctttgtgcattataacctctaacaata
tattatcagtgtacctgtatccaagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_184420587_184421181
seq2: B6Ng01-037L17.b_37_631 (reverse)

seq1  AGCCTCACTTTCCATCTCCCTGGTGAGGTTTGTTTGCCTGCAAAGCTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCACTTTCCATCTCCCTGGTGAGGTTTGTTTGCCTGCAAAGCTATT  50

seq1  TTGAAGAAGCAGATCCTTCTGGTACTCCCTGGCGTCTTCTCCAGGACCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGAAGCAGATCCTTCTGGTACTCCCTGGCGTCTTCTCCAGGACCCA  100

seq1  CCAGCACTGGGACAGAGTGAGGAGAGGTTGCAGGGCTGCTCAAACAACCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCACTGGGACAGAGTGAGGAGAGGTTGCAGGGCTGCTCAAACAACCC  150

seq1  TGCAGGTGCCGGACAAGGTGTCAAGACCAGCAGAAGGGGGGTGGGGGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGTGCCGGACAAGGTGTCAAGACCAGCAGAAGGGGGGTGGGGGGCT  200

seq1  TTTTGTGACCTGCGGTCTGTGAGTGGAGTGATACAACACAGTTAGAATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTGACCTGCGGTCTGTGAGTGGAGTGATACAACACAGTTAGAATGG  250

seq1  AAAGTGGGATGGGGATGAAGGTCTGGTGGCACTGTTACTGTATCAATGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGGGATGGGGATGAAGGTCTGGTGGCACTGTTACTGTATCAATGGC  300

seq1  GCCCCTAGAGGACTATTGCCTGGTGACCCTGGGCAAGGGATGCACCCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTAGAGGACTATTGCCTGGTGACCCTGGGCAAGGGATGCACCCATG  350

seq1  CCTTAAGGAGCTTCTGGGTGGCGGCGGACTTGAGTGCTTGCGGAGGGTGA  400
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CCTTAAGGAGCTTATGGGTGGCGGCGGACTTGAGTGCTTGCGGAGGGTGA  400

seq1  TGGAGACTTACATCGATAGAGCAGCCAAGCAGAGAACCTTTCTCCAAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGACTTACATCGATAGAGCAGCCAAGCAGAGAACCTTTCTCCAAAGC  450

seq1  CTTCTGGATGATCTTGAACAAGTTGGGAGGAGGCTTCCTCAGCTCATACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGGATGATCTTGAACAAGTTGGGAGGAGGCTTCCTCAGCTCATACC  500

seq1  ACTCAGCAATGCCTCCTGTGAAGTCTTCAAAGCCTTCCGTGGTGGCACCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGCAATGCCTCCTGTGAAGTCTTCAAAGCCTTCCGTGGTGGCACCC  550

seq1  CCTGAGAGTGCTTCATAGCACCCATTGATCCTGAAGGGGGAATTC  595
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGAGTGCTTCATAGCACCCATTGATCCTGAAGGGGGAATTC  595

seq1: chr1_184259403_184259730
seq2: B6Ng01-037L17.g_77_403

seq1  CTTAGAGACAATGAGGAGTTGCTTTTGAATGTTAGAAATCCAGCTGAGGC  50
      |||| |||| ||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAGAC-ATGAGGAGTTGCTTTTGAATGTTAGAAATCCAGCTGAGGC  49

seq1  TGGACAAGTTAAGAACAAGTGTCCTTAACTGCTGAGCCATCTCTCCAGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAAGTTAAGAACAAGTGTCCTTAACTGCTGAGCCATCTCTCCAGCC  99

seq1  CTCTTTTTTAAAAACTTGAGACAGGGTTTCTCTGTGTAGCCTTGGCTGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTTTAAAAACTTGAGACAGGGTTTCTCTGTGTAGCCTTGGCTGTC  149

seq1  CTGGAACTTGCTCTGTAGACCAGGCTGGCCTCAAACTCAAGAATTCGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAACTTGCTCTGTAGACCAGGCTGGCCTCAAACTCAAGAATTCGTCT  199

seq1  GGCTCAGCCTCCCCATTATGTGGGTCACCACTGCCCGGGGAAGATTATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCAGCCTCCCCATTATGTGGGTCACCACTGCCCGGGGAAGATTATTC  249

seq1  ATTTCTAGTGTACTTCTAGCTGACCTTTGTGCATTATAACCTCTAACAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTAGTGTACTTCTAGCTGACCTTTGTGCATTATAACCTCTAACAAT  299

seq1  ATATTATCAGTGTACCTGTATCCAAGAA  328
      ||||||||||||||||||||||||||||
seq2  ATATTATCAGTGTACCTGTATCCAAGAA  327