BAC Information

Click to search

BAC

Clone NameB6Ng01-037P12
Chromosome1 (Build37)
Map Location 104,188,713 - 104,304,005
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040993, LOC383650
Downstream geneLOC100041056, LOC100041067
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037P12.bB6Ng01-037P12.g
ACCDH865675DH865676
length331900
definitionDH865675|Mus musculus domesticus DNA, BAC clone: B6Ng01-037P12, 5' end.DH865676|Mus musculus domesticus DNA, BAC clone: B6Ng01-037P12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(104,188,713 - 104,189,043)(104,303,098 - 104,304,005)
sequence
accacagaagttgtagccctaggtggcactagatggattttctttcaaca
ttctacctactcgaaatacaaaggattatagtgactgtttctctttagat
atcattttattagttaaaagggataatgtctctgattgttgttttgctca
agagaagagaagaaattttaagcatttatgtgaaattcagtccttaaggt
gaggctaataaatgcatgaataatgcagaaaagtcacttcccttgtaatt
gtgttcttgccttattttgttcttttcattcttagctattcattggagtg
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gaattccaggacagtaacaggcactgattcaaaataaaatggcaattaat
atggacatagcttgaggaagagaacttgagtttatgctgtcatatatata
tatatatatatatatatatatatatatatatatgcatacaaaaaggaaca
tgaatagacacgcttatacaaataaaccaataaactgtgacaaacagcag
gttgctgcttttctgttccacgtcctgaagaacttgcaacatctcctgct
aatagtaaatcccagcttttgccagatgctatgtctgtggggtttttttg
ttctgttggttgtttttttttttttcttttttctttttcttttttttttt
tttttttgaatcttttgtcttcttatcctttgtgtttccagggaccttat
attacagagaggtagccataaagaactctgtcgatcaagatagctttcca
gtttacccactaatcagacccttctctggctaaccatttttgccatttca
tgcatctctataagtgacatttggtagctgaaatctctgagtttaatttc
actatggctgataaattatgtgagcttctgaaagacatgaccatgaaggg
aaacaggattttttcaccctaaaacaagccacattaatactgttttcact
gatggtatttaagtaaagcaattaaccaaacatataaataaacaacaaaa
catattcaagagcctaagtagttcgtcagaaaatgcttgccttgcattta
tgggttactggatctcactcttcatccccaaaatatgatgggaatggact
atttcttagaatcttaaatttgtatatctgaagagggggaaataaaaaaa
ttcctgtgatctctggcctgccccttgcccaacccctgagaagatcttac

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_104188713_104189043
seq2: B6Ng01-037P12.b_50_380

seq1  ACCACAGAAGTTGTAGCCCTAGGTGGCACTAGATGGATTTTCTTTCAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAGAAGTTGTAGCCCTAGGTGGCACTAGATGGATTTTCTTTCAACA  50

seq1  TTCTACCTACTCGAAATACAAAGGATTATAGTGACTGTTTCTCTTTAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACCTACTCGAAATACAAAGGATTATAGTGACTGTTTCTCTTTAGAT  100

seq1  ATCATTTTATTAGTTAAAAGGGATAATGTCTCTGATTGTTGTTTTGCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTTATTAGTTAAAAGGGATAATGTCTCTGATTGTTGTTTTGCTCA  150

seq1  AGAGAAGAGAAGAAATTTTAAGCATTTATGTGAAATTCAGTCCTTAAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGAGAAGAAATTTTAAGCATTTATGTGAAATTCAGTCCTTAAGGT  200

seq1  GAGGCTAATAAATGCATGAATAATGCAGAAAAGTCACTTCCCTTGTAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTAATAAATGCATGAATAATGCAGAAAAGTCACTTCCCTTGTAATT  250

seq1  GTGTTCTTGCCTTATTTTGTTCTTTTCATTCTTAGCTATTCATTGGAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCTTGCCTTATTTTGTTCTTTTCATTCTTAGCTATTCATTGGAGTG  300

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  331
      |||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  331

seq1: chr1_104303098_104304005
seq2: B6Ng01-037P12.g_71_970 (reverse)

seq1  GTAAGATC-TCTCAGTGGTTTGGGCAAGGTGGCAGGCCAGAGATCACTAG  49
      |||||||| |||||| || |||||||||| ||||||||||||||||| ||
seq2  GTAAGATCTTCTCAG-GGGTTGGGCAAGG-GGCAGGCCAGAGATCAC-AG  47

seq1  GAATTTTCTTATTTCCACCTCTTCAGAT-TACAAATTCTAAGATTCTAAG  98
      ||||||| |||||||| ||||||||||| |||||||| ||||||||||||
seq2  GAATTTTTTTATTTCCCCCTCTTCAGATATACAAATT-TAAGATTCTAAG  96

seq1  TAAATAGTCCATTCCCATCATATTTTGTGGGATTGAGAGTGAGATTCAGT  148
       |||||||||||||||||||||||||| |||||  |||||||||| ||||
seq2  -AAATAGTCCATTCCCATCATATTTTG-GGGATGAAGAGTGAGATCCAGT  144

seq1  TACCCATTATTGCAAGGCAAGCATTTTGCTGACTGAACTACTTAAGCTCT  198
       |||||| | ||||||||||||||||| ||||| |||||||||| |||||
seq2  AACCCATAAATGCAAGGCAAGCATTTT-CTGAC-GAACTACTTAGGCTCT  192

seq1  TGAATATGTTTTTGTTGTTTATTTATATTGTTTGGTTTATTTGCTTTTAC  248
      |||||||| |||||||||||||||||| ||||||| ||| |||| |||||
seq2  TGAATATG-TTTTGTTGTTTATTTATA-TGTTTGG-TTAATTGC-TTTAC  238

seq1  TTAAATACCATCAGTGAAAACAGTATTAATGTGGCTTGTTTTAGGGTG-A  297
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTAAATACCATCAGTGAAAACAGTATTAATGTGGCTTGTTTTAGGGTGAA  288

seq1  AAAATCCTGTTTCCCTTCATGGTCATGTCTTTCAGAAGCTCACAT-ATTT  346
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AAAATCCTGTTTCCCTTCATGGTCATGTCTTTCAGAAGCTCACATAATTT  338

seq1  ATCAGCCATAGTGAAATTAAACTCAGAGATTTCAGCTACCAAATGTCACT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCCATAGTGAAATTAAACTCAGAGATTTCAGCTACCAAATGTCACT  388

seq1  TATAGAGATGCATGAAATGGCAAAAATGGTTAGCCAGAGAAGGGTCTGAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAGATGCATGAAATGGCAAAAATGGTTAGCCAGAGAAGGGTCTGAT  438

seq1  TAGTGGGTAAACTGGAAAGCTATCTTGATCGACAGAGTTCTTTATGGCTA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGGTAAACTGGAAAGCTATCTTGATCGACAGAGTTCTTTATGGCTA  488

seq1  CCTCTCTGTAATATAAGGTCCCTGGAAACACAAAGGATAAGAAGACAAAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTGTAATATAAGGTCCCTGGAAACACAAAGGATAAGAAGACAAAA  538

seq1  GATTCAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAAGAAAAAAAAAAAAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAAGAAAAAAAAAAAAA  588

seq1  CAACCAACAGAACAAAAAAACCCCACAGACATAGCATCTGGCAAAAGCTG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCAACAGAACAAAAAAACCCCACAGACATAGCATCTGGCAAAAGCTG  638

seq1  GGATTTACTATTAGCAGGAGATGTTGCAAGTTCTTCAGGACGTGGAACAG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTACTATTAGCAGGAGATGTTGCAAGTTCTTCAGGACGTGGAACAG  688

seq1  AAAAGCAGCAACCTGCTGTTTGTCACAGTTTATTGGTTTATTTGTATAAG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCAGCAACCTGCTGTTTGTCACAGTTTATTGGTTTATTTGTATAAG  738

seq1  CGTGTCTATTCATGTTCCTTTTTGTATGCATATATATATATATATATATA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTCTATTCATGTTCCTTTTTGTATGCATATATATATATATATATATA  788

seq1  TATATATATATATATATATATGACAGCATAAACTCAAGTTCTCTTCCTCA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATATATGACAGCATAAACTCAAGTTCTCTTCCTCA  838

seq1  AGCTATGTCCATATTAATTGCCATTTTATTTTGAATCAGTGCCTGTTACT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATGTCCATATTAATTGCCATTTTATTTTGAATCAGTGCCTGTTACT  888

seq1  GTCCTGGAATTC  908
      ||||||||||||
seq2  GTCCTGGAATTC  900