BAC Information

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BAC

Clone NameB6Ng01-037P16
Chromosome1 (Build37)8 (Build37)
Map Location 47,285,276 - 47,286,37459,664,890 - 59,665,455
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneDnahc7b, LOC666855, Slc39a10
Downstream geneEG227061, LOC666869
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037P16.bB6Ng01-037P16.g
ACCDH865683DH865684
length1,098773
definitionDH865683|Mus musculus domesticus DNA, BAC clone: B6Ng01-037P16, 5' end.DH865684|Mus musculus domesticus DNA, BAC clone: B6Ng01-037P16, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(47,285,276 - 47,286,374)(59,664,890 - 59,665,455)
sequence
gaattcaaatacagtaataactgcataaaaagtgatcagagcagggaatg
aagatttgagttggttctagggaacacagacactttaacagatcctttag
tgtgcatgtttgaaagagtcttgctgtcaactgctaaggacagtattaat
atattggcgaaggtgactggaatgagtgttatctgtggctaaaagcactt
tgtgctcttttagaggacctgaatccaatccccaacacccaaatcagaca
gctcaagccctcttgtaactccaggtctagatggatctgatactctcttc
tggcttcagtgagcactgtacacacttaacacacctcagggcatgtaggg
aaaaataattgttttaaaatgatattgattaaagagagagaaagtgactt
aaaaagcacagagaaaaatctctgaccactttaacatgttgccaatagcc
ctgagagttaccacacacaagtataatatctttcctttcttacagggcct
aaatttcaacactaattcctgcaattagtgtttgttaagtgcagctctat
actacctcattttcacactgagacacagacagtaagatacaggcttaatt
gtaaagtacttctccatagtagatggactcccattatttccagccttatt
acatatctccacaaatctaatctctcttaaacatttctaggcttcttatt
aagttacttctgacttgtataacttgctaaaaattcattaaagagttcat
taaattttcaccaatctataaacccttatcactgcagtttttattagcta
agatataattaacttaggcctgacttttttaattttagggacaagtcatt
tacctacattatcaacagttttataataattacatttttactccatcaga
tttctctcaaataatgacctgtaattaggaattctacactttaatagttc
atagcattggtgacatatacttctgccttctgttacttctcactcggtag
taataaatatcttgtatttgtcggttataagaaatcataacaatagtaag
gcacagtcacagggatttattttagacttgtactaatgccaaacttta
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcggatctgttgttatgtctcccttttcatttctgatttttgtttaa
ttaggattttgtccctgtgccctttagtgagtctagctaagggtttatct
atcttgttgattttctcaaagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_47285276_47286374
seq2: B6Ng01-037P16.b_45_1143 (reverse)

seq1  TAAAGTTTTGCATTAGTACACATGTCTATAATAAAT-CCTGTGACTGTGG  49
      |||||||| ||||||||  ||| ||||| ||||||| |||||||||||| 
seq2  TAAAGTTTGGCATTAGT--ACAAGTCTAAAATAAATCCCTGTGACTGTGC  48

seq1  CCTACTATTGTTATTGATTTCTTTAAAACAGACAAATTACAAGATATTTA  99
      | ||||||||||| ||||||| ||| ||| |||||| |||||||||||||
seq2  CTTACTATTGTTA-TGATTTC-TTATAACCGACAAA-TACAAGATATTTA  95

seq1  TTACTTACAGAGTGAG-AGTAACAGAAGGCAGAAGTATATGTCACTATGG  148
      |||| ||| ||||||| |||||||||||||||||||||||||||| |  |
seq2  TTAC-TACCGAGTGAGAAGTAACAGAAGGCAGAAGTATATGTCACCAATG  144

seq1  CTATGAGCTATT-AAGTGTAGAATT-CTAATTACAGGTCATAATTTGAAG  196
      |||||| ||||| |||||||||||| ||||||||||||||| ||||| ||
seq2  CTATGAACTATTAAAGTGTAGAATTCCTAATTACAGGTCATTATTTG-AG  193

seq1  AGAAATCTGATGGAGTAAAAATGTAATTATTATAAAACTGTTGATAATGT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCTGATGGAGTAAAAATGTAATTATTATAAAACTGTTGATAATGT  243

seq1  AGGTAAATGACTTGTCCCTAAAATT-AAAAAGTCAGGCCT-AGTTAATTA  294
      ||||||||||||||||||||||||| |||||||||||||| |||||||||
seq2  AGGTAAATGACTTGTCCCTAAAATTAAAAAAGTCAGGCCTAAGTTAATTA  293

seq1  TATCTTAGCTAATAAAAACTGCAGTGATAA-GGTTTATAGATTGGTGAAA  343
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TATCTTAGCTAATAAAAACTGCAGTGATAAGGGTTTATAGATTGGTGAAA  343

seq1  AATTAATGAACTCTTTAATGAATTTTTAGCAAGTTATACAAGTCAGAAGT  393
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATGAACTCTTTAATGAATTTTTAGCAAGTTATACAAGTCAGAAGT  393

seq1  AACTTAATAAGAAGCCTAGAAATGTTTAAGAGAGATTAGATTTGTGGAGA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAATAAGAAGCCTAGAAATGTTTAAGAGAGATTAGATTTGTGGAGA  443

seq1  TATGTAATAAGGCTGGAAATAATGGGAGTCCATCTACTATGGAGAAGTAC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAATAAGGCTGGAAATAATGGGAGTCCATCTACTATGGAGAAGTAC  493

seq1  TTTACAATTAAGCCTGTATCTTACTGTCTGTGTCTCAGTGTGAAAATGAG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAATTAAGCCTGTATCTTACTGTCTGTGTCTCAGTGTGAAAATGAG  543

seq1  GTAGTATAGAGCTGCACTTAACAAACACTAATTGCAGGAATTAGTGTTGA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTATAGAGCTGCACTTAACAAACACTAATTGCAGGAATTAGTGTTGA  593

seq1  AATTTAGGCCCTGTAAGAAAGGAAAGATATTATACTTGTGTGTGGTAACT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAGGCCCTGTAAGAAAGGAAAGATATTATACTTGTGTGTGGTAACT  643

seq1  CTCAGGGCTATTGGCAACATGTTAAAGTGGTCAGAGATTTTTCTCTGTGC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGGCTATTGGCAACATGTTAAAGTGGTCAGAGATTTTTCTCTGTGC  693

seq1  TTTTTAAGTCACTTTCTCTCTCTTTAATCAATATCATTTTAAAACAATTA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAGTCACTTTCTCTCTCTTTAATCAATATCATTTTAAAACAATTA  743

seq1  TTTTTCCCTACATGCCCTGAGGTGTGTTAAGTGTGTACAGTGCTCACTGA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCCTACATGCCCTGAGGTGTGTTAAGTGTGTACAGTGCTCACTGA  793

seq1  AGCCAGAAGAGAGTATCAGATCCATCTAGACCTGGAGTTACAAGAGGGCT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGAAGAGAGTATCAGATCCATCTAGACCTGGAGTTACAAGAGGGCT  843

seq1  TGAGCTGTCTGATTTGGGTGTTGGGGATTGGATTCAGGTCCTCTAAAAGA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTGTCTGATTTGGGTGTTGGGGATTGGATTCAGGTCCTCTAAAAGA  893

seq1  GCACAAAGTGCTTTTAGCCACAGATAACACTCATTCCAGTCACCTTCGCC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAAAGTGCTTTTAGCCACAGATAACACTCATTCCAGTCACCTTCGCC  943

seq1  AATATATTAATACTGTCCTTAGCAGTTGACAGCAAGACTCTTTCAAACAT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATTAATACTGTCCTTAGCAGTTGACAGCAAGACTCTTTCAAACAT  993

seq1  GCACACTAAAGGATCTGTTAAAGTGTCTGTGTTCCCTAGAACCAACTCAA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACTAAAGGATCTGTTAAAGTGTCTGTGTTCCCTAGAACCAACTCAA  1043

seq1  ATCTTCATTCCCTGCTCTGATCACTTTTTATGCAGTTATTACTGTATTTG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCATTCCCTGCTCTGATCACTTTTTATGCAGTTATTACTGTATTTG  1093

seq1  AATTCC  1099
      ||||||
seq2  AATTCC  1099

seq1: chr8_59664890_59665455
seq2: B6Ng01-037P16.g_278_844 (reverse)

seq1  TTCTTTGAGAAAATCAACAAGATAGATAAACCCTTAGCTAGACTCACTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGAGAAAATCAACAAGATAGATAAACCCTTAGCTAGACTCACTAA  50

seq1  AGGGCACAGGGACAAAATCCTAATTAA--CAAAATCAGAAATGAAAAGGG  98
      |||||||||||||||||||||||||||   ||||||||||||||||||||
seq2  AGGGCACAGGGACAAAATCCTAATTAAACAAAAATCAGAAATGAAAAGGG  100

seq1  AGACATAACAACAGATCCTGAAGAAATCCAAAACACCATCAGATCCTTCT  148
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AGACATAACAACAGATCC-GAAGAAATCCAAAACACCATCAGATCCTTCT  149

seq1  ACAAAAGGCTATACTCAACAAAACTGGAAAACCTGGACGAAATGGACAAA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAGGCTATACTCAACAAAACTGGAAAACCTGGACGAAATGGACAAA  199

seq1  TTTCTGGACAGATACCAGGTACCAAAGTTGAATCAGGATCAAGTTGACCT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGGACAGATACCAGGTACCAAAGTTGAATCAGGATCAAGTTGACCT  249

seq1  TCTAAACAGTCCCATATCCCCTAAAGAAATAGAAGCAGTTATTAATAGTC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAACAGTCCCATATCCCCTAAAGAAATAGAAGCAGTTATTAATAGTC  299

seq1  TCCCAGCCAAAAAAAGCCCAGGACCAGACGGGTTTAGTGCAGAGTTCTAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGCCAAAAAAAGCCCAGGACCAGACGGGTTTAGTGCAGAGTTCTAT  349

seq1  CAGACCTTCAAAGAAGATCTAACTCCAGTTCTGCACAAACTTTTTCACAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCTTCAAAGAAGATCTAACTCCAGTTCTGCACAAACTTTTTCACAA  399

seq1  GATAGAAGTAGAAGGTATTCTACCCAACTCATTTTATGAAGCCACTATTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGAAGTAGAAGGTATTCTACCCAACTCATTTTATGAAGCCACTATTA  449

seq1  CTCTGATACCTAAACCACAGAAAGATCCAACAAAGATAGAGAACTTCAGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGATACCTAAACCACAGAAAGATCCAACAAAGATAGAGAACTTCAGA  499

seq1  CCAATTTCTCTTATGAACATCGATGCAAAAATCCTTAATAAAATTCTCGC  548
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CCAATTTCTCTTATGAATATCGATGCAAAAATCCTTAATAAAATTCTCGC  549

seq1  TAACCGAATCCAAGAACA  566
      ||||||||||||||||||
seq2  TAACCGAATCCAAGAACA  567