BAC Information

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BAC

Clone NameB6Ng01-038B14
Chromosome1 (Build37)
Map Location 130,868,116 - 131,032,583
singlet/doubletdoublet
Overlap genenone
Upstream geneZranb3, LOC666778, LOC100042670, EG666784, R3hdm1, LOC667109, LOC100042111, Ubxd2, Lct, Mcm6, Dars, LOC620659, Cxcr4
Downstream geneLOC100042732, Thsd7b, LOC100042745, LOC100042740
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038B14.bB6Ng01-038B14.g
ACCDH865770DH865771
length1,211618
definitionDH865770|Mus musculus domesticus DNA, BAC clone: B6Ng01-038B14, 5' end.DH865771|Mus musculus domesticus DNA, BAC clone: B6Ng01-038B14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(131,031,364 - 131,032,583)(130,868,116 - 130,868,733)
sequence
gaattcccaaactctgctttctaactctcatcagagtttctcatagagca
gcccagagttagctcttacccagggacattaagtactcagttaatctggc
atctaactgaaatcttgaagtctccagctgaaaggagtgacttaggtcta
agtgagaaaatgctaagatagttgtcccatcagagttcttcatagaagac
tcctgtgtgcatgtgcatgccctctgcgtgcatgtggactacagaagaca
acctcagctgtcactcctcaaatgctgtcaaccttgtgttttgagacaag
gtttctggctggcctggagctctttaagtgtcttcccatctctacctcct
cgtatccctccctagtgttggaattatagggacacctttgtgaatgacat
aaactgaactcaagtcctcatgcttgcaaggcaattgcttgcagactgac
ccatatccctagcctgtctttcttgactgtgattcttccttgactacagg
gagcagatcttgtcctaagagacaacttattctgcacagacatcttcctt
ttcttggaggtgtcgaagactgtcagtttgagtaaagatttggagactta
cgtattcagctgtgatctgtctcaaggtgattctcatattggaatgacat
gaatcactgctccagaggcagccaggtccagaagtaaactcaaaataaaa
agtgtctataaattcagacacctgaggggctagcaggattttacagacca
actctaccaacattatagcacaacgcactgagtttggattttaattatgc
cgataaaagattgagtctctctttgcagtatgctcctactgaacaaacat
agcttttaagtcaaagtcccaaagcggttaatgcagatgaacttgccttt
cagggaccctttagcttgttagtcataatgactatagtagtagattgaag
agaccacgatcagacaaccaaatccctagtctttacccacggccaaagaa
aaagattttagctttcatcttgagtgtgtgccaatgccacaggaagagaa
gaagttgaaggagaaagagaaaattggcaaaataaatttgccagataaca
agaatatgactggaacaaacatgggggctcacatttgtcaaaaaagagat
cgtttcaaagagttatcttatctcaccttttctctcatttgcgtgaagaa
tacactgaaca
gaattcctgaacacttgttcaaacacgattgtgggtgttagtgagggtct
ctttggatgagattaacactttaatccatggacttagttcagcaaatggc
cctctgcagtgtgatggacttcatccaatcagtgggcagcctgaaaaaac
aaaagaattttgctcccagagtagaagaatgcttgctgtttgagagattt
caatctgggacctgagtctttttctagcttttgggttggaacagtgagcc
catcctgggtcttccgtgctggttttaggactggagtcacaccactggct
ttcctgctttttatgcttgtggactgtgacttgaagaaaaccattagttg
ttgggtatgaagtgtgcctaactgccctggagaaattggggtataccagt
cttcataattttgctagtcaattccctataataaatctcattatatagac
agcagtataaatatatacatcttattgggttcactttgtaaaggactgta
ttattaatttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtataccatg
acatgtatgtggaggtcagtagacaactcgtgggagttggttctctcctt
ccattacgtgtgttccag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_131031364_131032583
seq2: B6Ng01-038B14.b_47_1257 (reverse)

seq1  TGTTCAGGTGAATTTCTTCA-GCAAATGA-AGAAAGGGTGAGATAAGAGT  48
      |||||| ||| | ||||||| |||||||| ||||| |||||||||||| |
seq2  TGTTCA-GTGTA-TTCTTCACGCAAATGAGAGAAAAGGTGAGATAAGA-T  47

seq1  AACTTCTTTTGAAACGATCTCTTTTTATGACAAATGTTGAGCCCCCATGT  98
      ||||   ||||||||||||||||||| ||||||||| |||||||||||||
seq2  AACT--CTTTGAAACGATCTCTTTTT-TGACAAATG-TGAGCCCCCATGT  93

seq1  TTGTTCCCAGTCATTATCTTGTTATCTGGCAAATTTATTTTTGCCAATTC  148
      ||||| ||||||||  ||||||||||||||||||||| ||||||||||| 
seq2  TTGTT-CCAGTCATATTCTTGTTATCTGGCAAATTTA-TTTTGCCAATTT  141

seq1  TCTTCTTTCTCCTTCCACTTTCTTCTCTTCCTGTGGCATTGGCACACACT  198
      || |||||||||||| || |||||||||||||||||||||||||||||||
seq2  TC-TCTTTCTCCTTCAAC-TTCTTCTCTTCCTGTGGCATTGGCACACACT  189

seq1  C-AGATGAAAGCTAAAAATCTTTGTCTTTGGCCGTGGGTAAAGACTAGGG  247
      | ||||||||||| ||||||||| ||||||||||||||||||||||||||
seq2  CAAGATGAAAGCT-AAAATCTTTTTCTTTGGCCGTGGGTAAAGACTAGGG  238

seq1  ATTTGGTTGTCTGATCGTGGTCTCTTCAATCTACTACTATAGTCATTATG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGTTGTCTGATCGTGGTCTCTTCAATCTACTACTATAGTCATTATG  288

seq1  ACTAACAAGCTAAAGGGTCCCTGAAAGGCAAGTTCATCTGCATTAACCGC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACAAGCTAAAGGGTCCCTGAAAGGCAAGTTCATCTGCATTAACCGC  338

seq1  TTTGGGACTTTGACTTAAAAGCTATGTTTGTTCAGTAGGAGCATACTGCA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGACTTTGACTTAAAAGCTATGTTTGTTCAGTAGGAGCATACTGCA  388

seq1  AAGAGAGACTCAATCTTTTATCGGCATAATTAAAATCCAAACTCAGTGCG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGACTCAATCTTTTATCGGCATAATTAAAATCCAAACTCAGTGCG  438

seq1  TTGTGCTATAATGTTGGTAGAGTTGGTCTGTAAAATCCTGCTAGCCCCTC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCTATAATGTTGGTAGAGTTGGTCTGTAAAATCCTGCTAGCCCCTC  488

seq1  AGGTGTCTGAATTTATAGACACTTTTTATTTTGAGTTTACTTCTGGACCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTCTGAATTTATAGACACTTTTTATTTTGAGTTTACTTCTGGACCT  538

seq1  GGCTGCCTCTGGAGCAGTGATTCATGTCATTCCAATATGAGAATCACCTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCCTCTGGAGCAGTGATTCATGTCATTCCAATATGAGAATCACCTT  588

seq1  GAGACAGATCACAGCTGAATACGTAAGTCTCCAAATCTTTACTCAAACTG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGATCACAGCTGAATACGTAAGTCTCCAAATCTTTACTCAAACTG  638

seq1  ACAGTCTTCGACACCTCCAAGAAAAGGAAGATGTCTGTGCAGAATAAGTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCTTCGACACCTCCAAGAAAAGGAAGATGTCTGTGCAGAATAAGTT  688

seq1  GTCTCTTAGGACAAGATCTGCTCCCTGTAGTCAAGGAAGAATCACAGTCA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTTAGGACAAGATCTGCTCCCTGTAGTCAAGGAAGAATCACAGTCA  738

seq1  AGAAAGACAGGCTAGGGATATGGGTCAGTCTGCAAGCAATTGCCTTGCAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGACAGGCTAGGGATATGGGTCAGTCTGCAAGCAATTGCCTTGCAA  788

seq1  GCATGAGGACTTGAGTTCAGTTTATGTCATTCACAAAGGTGTCCCTATAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAGGACTTGAGTTCAGTTTATGTCATTCACAAAGGTGTCCCTATAA  838

seq1  TTCCAACACTAGGGAGGGATACGAGGAGGTAGAGATGGGAAGACACTTAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAACACTAGGGAGGGATACGAGGAGGTAGAGATGGGAAGACACTTAA  888

seq1  AGAGCTCCAGGCCAGCCAGAAACCTTGTCTCAAAACACAAGGTTGACAGC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTCCAGGCCAGCCAGAAACCTTGTCTCAAAACACAAGGTTGACAGC  938

seq1  ATTTGAGGAGTGACAGCTGAGGTTGTCTTCTGTAGTCCACATGCACGCAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAGGAGTGACAGCTGAGGTTGTCTTCTGTAGTCCACATGCACGCAG  988

seq1  AGGGCATGCACATGCACACAGGAGTCTTCTATGAAGAACTCTGATGGGAC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCATGCACATGCACACAGGAGTCTTCTATGAAGAACTCTGATGGGAC  1038

seq1  AACTATCTTAGCATTTTCTCACTTAGACCTAAGTCACTCCTTTCAGCTGG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATCTTAGCATTTTCTCACTTAGACCTAAGTCACTCCTTTCAGCTGG  1088

seq1  AGACTTCAAGATTTCAGTTAGATGCCAGATTAACTGAGTACTTAATGTCC  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTCAAGATTTCAGTTAGATGCCAGATTAACTGAGTACTTAATGTCC  1138

seq1  CTGGGTAAGAGCTAACTCTGGGCTGCTCTATGAGAAACTCTGATGAGAGT  1197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTAAGAGCTAACTCTGGGCTGCTCTATGAGAAACTCTGATGAGAGT  1188

seq1  TAGAAAGCAGAGTTTGGGAATTC  1220
      |||||||||||||||||||||||
seq2  TAGAAAGCAGAGTTTGGGAATTC  1211

seq1: chr1_130868116_130868733
seq2: B6Ng01-038B14.g_67_684

seq1  GAATTCCTGAACACTTGTTCAAACACGATTGTGGGTGTTAGTGAGGGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGAACACTTGTTCAAACACGATTGTGGGTGTTAGTGAGGGTCT  50

seq1  CTTTGGATGAGATTAACACTTTAATCCATGGACTTAGTTCAGCAAATGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGATGAGATTAACACTTTAATCCATGGACTTAGTTCAGCAAATGGC  100

seq1  CCTCTGCAGTGTGATGGACTTCATCCAATCAGTGGGCAGCCTGAAAAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCAGTGTGATGGACTTCATCCAATCAGTGGGCAGCCTGAAAAAAC  150

seq1  AAAAGAATTTTGCTCCCAGAGTAGAAGAATGCTTGCTGTTTGAGAGATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAATTTTGCTCCCAGAGTAGAAGAATGCTTGCTGTTTGAGAGATTT  200

seq1  CAATCTGGGACCTGAGTCTTTTTCTAGCTTTTGGGTTGGAACAGTGAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTGGGACCTGAGTCTTTTTCTAGCTTTTGGGTTGGAACAGTGAGCC  250

seq1  CATCCTGGGTCTTCCGTGCTGGTTTTAGGACTGGAGTCACACCACTGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTGGGTCTTCCGTGCTGGTTTTAGGACTGGAGTCACACCACTGGCT  300

seq1  TTCCTGCTTTTTATGCTTGTGGACTGTGACTTGAAGAAAACCATTAGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGCTTTTTATGCTTGTGGACTGTGACTTGAAGAAAACCATTAGTTG  350

seq1  TTGGGTATGAAGTGTGCCTAACTGCCCTGGAGAAATTGGGGTATACCAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTATGAAGTGTGCCTAACTGCCCTGGAGAAATTGGGGTATACCAGT  400

seq1  CTTCATAATTTTGCTAGTCAATTCCCTATAATAAATCTCATTATATAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATAATTTTGCTAGTCAATTCCCTATAATAAATCTCATTATATAGAC  450

seq1  AGCAGTATAAATATATACATCTTATTGGGTTCACTTTGTAAAGGACTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTATAAATATATACATCTTATTGGGTTCACTTTGTAAAGGACTGTA  500

seq1  TTATTAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATACCATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATACCATG  550

seq1  ACATGTATGTGGAGGTCAGTAGACAACTCGTGGGAGTTGGTTCTCTCCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTATGTGGAGGTCAGTAGACAACTCGTGGGAGTTGGTTCTCTCCTT  600

seq1  CCATTACGTGGGTTCCAG  618
      |||||||||| |||||||
seq2  CCATTACGTGTGTTCCAG  618