BAC Information

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BAC

Clone NameB6Ng01-038C11
Chromosome1 (Build37)
Map Location 187,580,885 - 187,582,011
singlet/doubletsinglet
Overlap genenone
Upstream geneMosc1, Mosc2, LOC100039079, C130074G19Rik, Mark1, Iars2, Bpnt1, Eprs, 9630028B13Rik, LOC100039138, Slc30a10, 5033404E19Rik
Downstream geneLOC677785, Lyplal1, Tgfb2, Rrp15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038C11.bB6Ng01-038C11.g
ACCDH865806DH865807
length1,1191,165
definitionDH865806|Mus musculus domesticus DNA, BAC clone: B6Ng01-038C11, 5' end.DH865807|Mus musculus domesticus DNA, BAC clone: B6Ng01-038C11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagctgcttcagctttccaacatggatctaagacaagtggttctt
cagaacacccctgcccccacctgagaccttcagcaccagattgtcattgt
tgagccagtctaataaatccctttccattgattccaatcctctagagaac
cttggctaacacacagtagaatttctcatgcaactcaatatggaacggat
gtgtggccagggtgacacggagaagaaactaggtggattttggatttaac
tccagatcggtggtttctaaactatatccctgtctttgtatgtgtttctt
tttcaggtttctgataccaacacactctagaattacagaaaccaaagaag
gatctgccattctaaaaatgtttgttttctaccagttttctcaatgatgt
cagatctatcctgatggcagcacagttcagatgagaggttcatgcaattg
gtctctggcagcactagctcatgtctcatttacaactgtcccagtgcagt
gaggctcaagacagaaatgccctgttcacgccatcagacaaagcccacca
ctttgactttgttctgcacctacccctccctctccacacacatattggta
actataaagtcatggaaaaaccatcactgacaaagggtcaaacttctctc
ctacttctgaagattaacatggggccaaagccatgccaagagaatcccag
gccaaatgctgcttccaaaatgtccaaatattcacagctcgatttgaaaa
tatataaagaaaagattagtctgtgttttattggttgacttttattgcta
agcacgaatgggagttctggtcacttttttttttttttctgagctcctgc
cctgcacacattgacggattgtttggaagacggtgggaagttccatctag
gacatgttttctttctttacgaccattaacagttccttacccaaacaggt
tcttttgcagttagtctttctgcttttatgcaatgcgtcagtccctgata
tattgtacagttatatactgacagcccacataaacaacagtcccttgatg
gtttctgtcaccaaacaaacatgggtgggtggctagatacctatgtcaag
ctctgtatactcccttgcc
gaattctcacctgaggaataccaaatggctgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagagaaatgcaaatcaaaacaaccttgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacaac
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggta
ggattgcaagcttgtacaaccactctggaaatcagtctggcatttcctca
gaaaagtggacatagtactaccagaggatccagcaatacctctcctgggc
atatatccagaagatgtcccaaccagtaagaaggacacatgctccactat
attcatagcagccttatttataatagtcagaagctggaaagaacccagat
gcccctcaacagaggaatggatacaaataatgtggtacatttatacaatg
gagtactactcagctattaaaaggaatgaatttatgaaattcctaggcaa
atggttggacctggagggcattatcctgagtgaggtaacacaatcacaaa
agaactcaaatgatatgtcctctctgataagtggatattagcccagaaac
ttagtataccagagatgtaagatacaatttgcaaaacacatgaaactgaa
gaagaatgaagaccaaagtgtggacactttgccccttcttagaattggaa
acaatcacccatggaaggagttacagagacaaagtttggagctgagacaa
aaggatggatcatctagagactgccatatccagggatccatcccataatt
agcctccaaacgatgacaccattgcatacactagcaagcatttgctgaaa
ggaccctgatatagctggctcttgtgagactaggccaggactagcaaaca
cataagtgggatgctcacagtcagctaatggatggatcacagggccccca
atggaggagttagagaaagtatccaggagctaaagggatctgcaaccctg
cagtgcacagcatatgaactaccatacccggagctctgtctctagctgca
tattatcaaaaatgcctagtcgcatcctggaaagagaggccattggactt
gcaaccttaatgcccatacagggattcaggctcaatagtgggaatggtgg
tggtagggagatgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_187580885_187582011
seq2: B6Ng01-038C11.b_47_1165

seq1  GAATTCAGCTGCTTCAGCTTTCCAACATGGATCTAAGACAAGTGGTTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTGCTTCAGCTTTCCAACATGGATCTAAGACAAGTGGTTCTT  50

seq1  CAGAACACCCCTGCCCCCACCTGAGACCTTCAGCACCAGATTGTCATTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACACCCCTGCCCCCACCTGAGACCTTCAGCACCAGATTGTCATTGT  100

seq1  TGAGCCAGTCTAATAAATCCCTTTCCATTGATTCCAATCCTCTAGAGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCAGTCTAATAAATCCCTTTCCATTGATTCCAATCCTCTAGAGAAC  150

seq1  CTTGGCTAACACACAGTAGAATTTCTCATGCAACTCAATATGGAACGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCTAACACACAGTAGAATTTCTCATGCAACTCAATATGGAACGGAT  200

seq1  GTGTGGCCAGGGTGACACGGAGAAGAAACTAGGTGGATTTTGGATTTAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGCCAGGGTGACACGGAGAAGAAACTAGGTGGATTTTGGATTTAAC  250

seq1  TCCAGATCGGTGGTTTCTAAACTATATCCCTGTCTTTGTATGTGTTTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGATCGGTGGTTTCTAAACTATATCCCTGTCTTTGTATGTGTTTCTT  300

seq1  TTTCAGGTTTCTGATACCAACACACTCTAGAATTACAGAAACCAAAGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGGTTTCTGATACCAACACACTCTAGAATTACAGAAACCAAAGAAG  350

seq1  GATCTGCCATTCTAAAAATGTTTGTTTTCTACCAGTTTTCTCAATGATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGCCATTCTAAAAATGTTTGTTTTCTACCAGTTTTCTCAATGATGT  400

seq1  CAGATCTATCCTGATGGCAGCACAGTTCAGATGAGAGGTTCATGCAATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCTATCCTGATGGCAGCACAGTTCAGATGAGAGGTTCATGCAATTG  450

seq1  GTCTCTGGCAGCACTAGCTCATGTCTCATTTACAACTGTCCCAGTGCAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGGCAGCACTAGCTCATGTCTCATTTACAACTGTCCCAGTGCAGT  500

seq1  GAGGCTCAAGACAGAAATGCCCTGTTCACGCCATCAGACAAAGCCCACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTCAAGACAGAAATGCCCTGTTCACGCCATCAGACAAAGCCCACCA  550

seq1  CTTTGACTTTGTTCTGCACCTACCCCTCCCTCTCCACACACATATTGGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGACTTTGTTCTGCACCTACCCCTCCCTCTCCACACACATATTGGTA  600

seq1  ACTATAAAGTCATGGAAAAACCATCACTGACAAAGGGTCAAACTTCTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATAAAGTCATGGAAAAACCATCACTGACAAAGGGTCAAACTTCTCTC  650

seq1  CTACTTCTGAAGATTAACATGGGGCCAAAGCCATGCCAAGAGAATCCCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTCTGAAGATTAACATGGGGCCAAAGCCATGCCAAGAGAATCCCAG  700

seq1  GCCAAATGCTGCTTCCAAAATGTCCAAATATTCACAGCTCGATTTGAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAATGCTGCTTCCAAAATGTCCAAATATTCACAGCTCGATTTGAAAA  750

seq1  TATATAAAGAAAAGATTAGTCTGTGTTTTATTGGTTGACTTTTATTGCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAAAGAAAAGATTAGTCTGTGTTTTATTGGTTGACTTTTATTGCTA  800

seq1  AGCACGAATGGGAGTTCTGGTCACTTTTTTTTTTTTTTCTGAGCTCCTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACGAATGGGAGTTCTGGTCACTTTTTTTTTTTTTTCTGAGCTCCTGC  850

seq1  CCTGCACACATTGACGGATTGTTTGGAAGACGGTGGGAAGTTCCATCTAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCACACATTGACGGATTGTTTGGAAGACGGTGGGAAGTTCCATCTAG  900

seq1  GACATGTTTTCTTTCTTTACGACCATTAACAGTTCCTTACCCAAACAGGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGTTTTCTTTCTTTACGACCATTAACAGTTCCTTACCCAAACAGGT  950

seq1  TCTTTTGCAGTTTAGTCTTTCTGCCTTTTTAATGCAATGCGTCAGTCCCT  1000
      |||||||||| |||||||||||||   ||| |||||||||||||||||||
seq2  TCTTTTGCAG-TTAGTCTTTCTGC---TTTTATGCAATGCGTCAGTCCCT  996

seq1  GATATAATTGTACAGTTATATACTGACAGCCCACATAAACAACAGTCCCT  1050
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAT-ATTGTACAGTTATATACTGACAGCCCACATAAACAACAGTCCCT  1045

seq1  TGATGGTGTCCTGTCACCAAAACAAACATGGGTGGGTGGCTTAGATACCT  1100
      ||||||| | |||||||| ||||||||||||||||||||| |||||||||
seq2  TGATGGT-TTCTGTCACC-AAACAAACATGGGTGGGTGGC-TAGATACCT  1092

seq1  ATGTC-AGCTCTTGTATCTCCCCTTGCC  1127
      ||||| ||||| |||||   ||||||||
seq2  ATGTCAAGCTC-TGTATACTCCCTTGCC  1119