BAC Information

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BAC

Clone NameB6Ng01-039A21
Chromosome1 (Build37)
Map Location 61,720,726 - 61,721,252
singlet/doubletsinglet
Overlap genePard3b
Upstream geneEif4a-ps4, Cd28, LOC667555, Rpl18-rs8, Ctla4, LOC100043049, Icos, LOC433313, LOC100042566
Downstream geneLOC667592
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-039A21.bB6Ng01-039A21.g
ACCDH866436DH866437
length890945
definitionDH866436|Mus musculus domesticus DNA, BAC clone: B6Ng01-039A21, 5' end.DH866437|Mus musculus domesticus DNA, BAC clone: B6Ng01-039A21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttggggtcacttatgtatactatcatatcatcttcaaatagtga
tattttcacttcttcccttccaatttgtatccctttgatctccatttgtt
gtctaattgctctggctaggacttcaaatactatgttgaataggtaggta
gagagtgggaagggacttgtctagtccctgattttagtgggattgcttca
agtttctctccatttagtttgatgttggctactggttttctatatattgc
ttttactatgtgtacgtgtgggccttgaattcctgactttccaaaacttt
tatcatgaatgggtgctgaattttatcaaatgctttttcaaaatctaatg
agatgaccatgtggtttttgtctttgagtttgtttacataatggattaca
ttgatggatttccatatattgaaccatccccgcatccctgggatgaagcc
tacttgatcatgatggatgattgttttgatgtgttcttagattcagtttg
acagaattttattgaatatttttgtatccatattcttaagggaaattggt
ctgaagttctctttctttgttgggtctttatgtggtttaggtatcagagt
aactgtggcttcataggatgaatttggtagagtaccttctgtttctattt
tgtgaaataatttgaggagaactggaattaggtcttctttgaaggtctga
tagaactctgccctaaacacatctggtcctgggcttattttttgttgaag
actattaatgactttttctatttctttaggggatatgggactgtttaaat
tgttatctgatcctgattacttggtactgctatctgtctagaaattgtcc
actcatccagtttttcctgtttaagacttaggctttgaga
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcctgccgtctactcctcttgggtgaatttgcttccttttttctagggc
ttttagatgtgtgtcaagctgctagtatgtgctgtctcccgtttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_61720726_61721252
seq2: B6Ng01-039A21.g_67_593 (reverse)

seq1  CCATCTAAACAGTCCCATATCACCTAAAGAAATAGAAGCAGTTATTAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTAAACAGTCCCATATCACCTAAAGAAATAGAAGCAGTTATTAATA  50

seq1  GTCTCCCAACCAAAAAAAGCCCAGGACCAGATGGGTTTAGTGCAGAGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCCAACCAAAAAAAGCCCAGGACCAGATGGGTTTAGTGCAGAGTTC  100

seq1  TATCAGACCTTCAAAGAAGATCTAATTCCAATTCTGCACAAACTATTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGACCTTCAAAGAAGATCTAATTCCAATTCTGCACAAACTATTTCA  150

seq1  CAAAATAGAAGTAGAAGGTACTCTACCCAACTCATTTTATGAAGCCACTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATAGAAGTAGAAGGTACTCTACCCAACTCATTTTATGAAGCCACTA  200

seq1  TTACTCTGATACCTAAACCACAGAAAGATCCAACAAAGATAGAGAACTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCTGATACCTAAACCACAGAAAGATCCAACAAAGATAGAGAACTTC  250

seq1  AGACCAATTTCTCTTATGAATATCGATGCAAAAATCCTCAATAAAATTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAATTTCTCTTATGAATATCGATGCAAAAATCCTCAATAAAATTCT  300

seq1  CGCTAACCGAATCCAAGAACACATTAAAGCAATCATCCATCCTGACCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTAACCGAATCCAAGAACACATTAAAGCAATCATCCATCCTGACCAAG  350

seq1  TAGGTTTTATTCCAGGGATGCAGGGATGGTTTAATATACGAAAATCCATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTTTATTCCAGGGATGCAGGGATGGTTTAATATACGAAAATCCATC  400

seq1  AATGTAATCCATTATATAAACAAACTCAAAGACAAAAACCACATGATCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAATCCATTATATAAACAAACTCAAAGACAAAAACCACATGATCAT  450

seq1  CTCGTTAGATGCAGAAAAAGCATTTGACAAGATCCAACACCCATTCATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTTAGATGCAGAAAAAGCATTTGACAAGATCCAACACCCATTCATGA  500

seq1  TAAAAGTTTTGGAAAGATCAGGAATTC  527
      |||||||||||||||||||||||||||
seq2  TAAAAGTTTTGGAAAGATCAGGAATTC  527