BAC Information

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BAC

Clone NameB6Ng01-040C08
Chromosome1 (Build37)
Map Location 177,164,099 - 177,164,432
singlet/doubletsinglet
Overlap geneRgs7
Upstream geneSpna1, Olfr419, 1810030J14Rik, Olfr417, GA_x5J8B7W3B3M-312879-313274, GA_x5J8B7W3B3M-318013-318414, Olfr415, Olfr414, Olfr220, Fmn2, Grem2
Downstream geneFh1, Kmo, Opn3, Chml, Wdr64, Exo1, Gm104, Pld5, B020018G12Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-040C08.bB6Ng01-040C08.g
ACCDH867204DH867205
length803987
definitionDH867204|Mus musculus domesticus DNA, BAC clone: B6Ng01-040C08, 5' end.DH867205|Mus musculus domesticus DNA, BAC clone: B6Ng01-040C08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgatctttccaagacttttatcatgaatgggtgttggattttg
tcaaatgctttctcagcatctaacgagatgatcatgtgggttttgtcttt
gagtttgtttatatactggattacattgatggatttccgtatattgaacc
atccctgcatccctgggatgaaacctacttggtaaggatggatgattgtt
ttgatgtgttcttggattcggttagcaagaactttattgaggatttttgc
atcgatattcataagggaaattggtctgaagttctctatctttgttgggt
ctttctgtggtttaggtatcagggtaattgtggcttcatagaatgagctg
ggtatagtaccttccgtttctattttgtggaatagtttgtgaagaactgg
aattaggtcttctttgaaggtctgatagaactttgcactgaacctgtttg
gtcctgggctttttttggctgggagactattaataactgcttctatttcc
tcttggaggattttaccattgatgaatatgaagtgtccctccttttcttt
tttgataacttaggggttgaaagtccagcttgtttcttcagaccatttgc
ttggaaaattgttttcccgccttttactctaagatagtttctgtcttttt
tactgaggtgggtttcctttaagcagcaaaatgttggatcctgtttgttt
agccagtctattaggctttgtctttttattggggaattgagtccattgat
gtttaagagaaattaaagaaaattaattgttgcttcctgttatttttgtt
gtt
gaattctcacctgaggaataccgaatggctgagaagcaactgaaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaacactgaga
ttccacttcactccaatcagaatggctaagatcaaaaattcaggtgacag
cagatgctggcgaagatgtggagaaagagaaacactcctccattgttggt
gggattgcaagcttgtacaaccactctggaaattagtctagcggttcctc
agaaaattagacatagtactaccagaggatccagcaatacctctcctggg
catatatccagaagatgttctaactggtaagaagaacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacccaga
tgcccctcagcagaggaatggatacagaaaatgtggtacatctacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctaggca
aatggatggacctggagggcatcatcctgagtgaggtaacccaatcacaa
aggaactctcacaatatgtactcactgataagtggatattagcccagaaa
cttaggatacccaagatataagatacaatttgctaaatgcatgaaattca
agaagaacgaagaccaaagtgtggacactttgcccctttcttagaaatgg
gaacaaaacacccatggaaggagttgtagagacaaaaatttggagctgtg
acgaaaggatggaccatctagtgattgccatatgcagggatccatcccat
aatcagcttccaaacgctgacaccattgcatacactagcaagatttttgc
tgaaaggacccagatgtagctgtctcttgtgagactatgccggggcctag
caaacacaaagtggatgatcacagtcaactattggatggatcacccagcc
cccaatggaggagctagagaaattacccaaggagcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_177164099_177164432
seq2: B6Ng01-040C08.b_541_847 (reverse)

seq1  AACAACAAAAATAAAAGGAAGCAACAATTACTTTTCCTTAATATCTCTT-  49
      |||||||||||||| ||||||||||||||| ||||| ||||| |||||| 
seq2  AACAACAAAAATAACAGGAAGCAACAATTAATTTTCTTTAATTTCTCTTA  50

seq1  AATATCAATGGACTCAATTCCCCAATAAAAAGACATAGACTAACAGACTG  99
      || |||||||||||||||||||||||||||||||| || |||| ||||||
seq2  AACATCAATGGACTCAATTCCCCAATAAAAAGACAAAGCCTAATAGACTG  100

seq1  GCTACACAAACAGGACCCAACATTCTGCTGCTTACAGGAAACCCATCTCA  149
      |||| |||||||||| |||||||| ||||||||| |||||||||| ||||
seq2  GCTAAACAAACAGGATCCAACATTTTGCTGCTTAAAGGAAACCCACCTCA  150

seq1  GGGAAAAAGACAGACACTACCTCAGAGTGAAAGGCTGGAAAACAATTTTC  199
      |  ||||||||||| |||| || ||||| |||||| ||||||||||||||
seq2  GTAAAAAAGACAGAAACTATCTTAGAGTAAAAGGCGGGAAAACAATTTTC  200

seq1  CAAGCAAATGGTCTGAAGAAACAAGCTGGAGTAGCCATTCTAATATCGGA  249
      |||||||||||||||||||||||||||||| |                  
seq2  CAAGCAAATGGTCTGAAGAAACAAGCTGGACT------------------  232

seq1  TAAAATCGACTTCCAACCCAAAGTTATCAAAAAAGACAAGGAGGGACACT  299
                ||| | ||| |||||||||||||||| |||||||||||||
seq2  ----------TTCAACCCCTAAGTTATCAAAAAAGAAAAGGAGGGACACT  272

seq1  TCATACTCATCAAAGGCAAAATCCTCCAAGAGGAA  334
      ||||| ||||||| || ||||||||||||||||||
seq2  TCATATTCATCAATGGTAAAATCCTCCAAGAGGAA  307