BAC Information

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BAC

Clone NameB6Ng01-042P07
Chromosome1 (Build37)
Map Location 32,555,254 - 32,556,511
singlet/doubletsinglet
Overlap geneKhdrbs2
Upstream geneLOC624275, LOC666056, LOC100041238
Downstream geneEG408191, EG633498, LOC213711, LOC100040828, EG666108, Prim2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-042P07.bB6Ng01-042P07.g
ACCDH869166DH869167
length1,2551,174
definitionDH869166|Mus musculus domesticus DNA, BAC clone: B6Ng01-042P07, 5' end.DH869167|Mus musculus domesticus DNA, BAC clone: B6Ng01-042P07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatatgacagggtagctaatccatgacattacaacattatgatt
gcctaaatcgggtctgaaaagtgacaatgtcagttgacctgccaacatgg
gtggagaaatctcttagaccttgatgaaaagctgtacgcaattaatgatt
atttagggaggaaaaatcatctcccctaggaataatctccaaaactggtt
atctaataccaagtgatcaacaataaaaaagtatgccctcagataataca
tgtatatatgtgaatgtgtatatatacatatattatataaagaatatgca
tacatataaaacaatagcaattaaagaaaagaaaaagacagtccaaagaa
ttgcttgaatttgtttgttaagaccatggaggttctacattaggggcaac
aggaaagtcataataaagactatgatgtgaatgcaatctttatggaatat
aacagtgtacaatcttcatatacatagcaggatcaaaaataagactgatt
cagcttctagatatgctatcttgccttaacatttgacatatataattttt
agaattaaatttctcttctgaaaaaatatcatctggtttttgttaaattt
tttgaagaataagtatcctgtagtaaatgtacacctttgggaaataagtt
atttagcaataacagtaacacttccatagggtttatatctgtgtacaaca
gtgtgtgtttgtgtgcatatgtgtaacaaccttttcatgaagaactataa
taccatggtacacttgatttcacttcatcctgccaattttacttttacta
tcaaataagtatttgttcttctttgcttaatttccctgaagactggaaaa
tatgacccatcaacacagacacagctgagaggcagcagaacactcatgtt
tctggacaggggcagtccatagatcaacacctatgttattcttcacgtct
atgagaacattctgggtgtctggcacttagttattgcaaagtcacactga
gaaacagtcttttcctctccacactacggcccaagtcacaggtcacagta
ctgcttttctgctttctcacctttaagctcacacttgatttgttccctgg
ggatttcctctcaaactcttgcatcaggtctgcctttcatcaacaaagac
ttgaattgaaccaattcagcttgaatcttgcagggtgggacttatcagta
tttctagctcaatgctttcctttcggtatccagtggtgcaggtttgtaga
gcagc
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcctgcagtctactcctcttgggtgaatttgcttccttttttctagggc
ttttagatgtgttgtcagctgctagtatgtgctgtctcccatttcttctg
gagcactcagcgcttatgagttccctcttagaaatgctttcattgggtcc
ataggtttggtacgttgtggcttcattttcattaacctcaaaaagtctta
atttctttcttatttcctcttgaccaggtatcattgagaaagaaggttat
cagttccacggaaaggttggctttccatattttaggtgtatggagaactc
tctaggcagtgggggctgagggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_32555254_32556511
seq2: B6Ng01-042P07.b_47_1301 (reverse)

seq1  GCTGCTC--AAAACCTGCAC--ATGATAACAGAAAAGAAAGGCATTGAGA  46
      |||||||   ||||||||||   ||   || |||| |||| |||||||| 
seq2  GCTGCTCTACAAACCTGCACCACTGGATACCGAAAGGAAA-GCATTGAG-  48

seq1  CTAGAAATACTTGGATAAGGTGCCCACCTGCAAGATTCAAGCTGAATGTG  96
      |||||||||||  ||||| || ||  ||||||||||||||||||||| ||
seq2  CTAGAAATACT--GATAA-GTCCCACCCTGCAAGATTCAAGCTGAAT-TG  94

seq1  GTTC-ATTCATGTCTTTTTGTTTTGATGAAA-GCAGAACCTGATGCAAGA  144
      |||| ||||| |||||    | ||||||||| |||| |||||||||||||
seq2  GTTCAATTCAAGTCTT----TGTTGATGAAAGGCAG-ACCTGATGCAAGA  139

seq1  GTTTGAGAGGAAAT-CCCAGGGAACAAAATCAAGTGTGAGC-TAAAGGTG  192
      |||||||||||||| |||||||||| ||||||||||||||| ||||||||
seq2  GTTTGAGAGGAAATCCCCAGGGAAC-AAATCAAGTGTGAGCTTAAAGGTG  188

seq1  AGAAAGCAGAAAAGCAGTACTGTGACCTGTGACTTGGGCGGTAGTGTGGA  242
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AGAAAGCAGAAAAGCAGTACTGTGACCTGTGACTTGGGCCGTAGTGTGGA  238

seq1  GAGG-AAAGACTGTGTCTCAGTGGTGACTTTGCAATAACTAAGTGCCAGA  291
      |||| ||||||||| ||||||| |||||||||||||||||||||||||||
seq2  GAGGAAAAGACTGTTTCTCAGT-GTGACTTTGCAATAACTAAGTGCCAGA  287

seq1  CACACAGAATGTTCTCATAGACGTGAAGAATAACATAGGTGTTGATCTAT  341
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCAGAATGTTCTCATAGACGTGAAGAATAACATAGGTGTTGATCTAT  337

seq1  GGACTGCCCCTGTCCAG-AACATGAGTGTTCTGCTGCCTCTCAGCTGTGT  390
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GGACTGCCCCTGTCCAGAAACATGAGTGTTCTGCTGCCTCTCAGCTGTGT  387

seq1  CTGTGTTGATGGGTCATATTTTCCAGTCTTCAGGGAAATTAAGCAAAGAA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTTGATGGGTCATATTTTCCAGTCTTCAGGGAAATTAAGCAAAGAA  437

seq1  GAACAAATACTTATTTGATAGTAAAAGTAAAATTGGCAGGATGAAGTGAA  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAATACTTATTTGATAGTAAAAGTAAAATTGGCAGGATGAAGTGAA  487

seq1  ATCAAGTGTACCATGGTATTATAGTTCTTCATGAAAAGGTTGTTACACAT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGTGTACCATGGTATTATAGTTCTTCATGAAAAGGTTGTTACACAT  537

seq1  ATGCACACAAACACACACTGTTGTACACAGATATAAACCCTATGGAAGTG  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACACAAACACACACTGTTGTACACAGATATAAACCCTATGGAAGTG  587

seq1  TTACTGTTATTGCTAAATAACTTATTTCCCAAAGGTGTACATTTACTACA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGTTATTGCTAAATAACTTATTTCCCAAAGGTGTACATTTACTACA  637

seq1  GGATACTTATTCTTCAAAAAATTTAACAAAAACCAGATGATATTTTTTCA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACTTATTCTTCAAAAAATTTAACAAAAACCAGATGATATTTTTTCA  687

seq1  GAAGAGAAATTTAATTCTAAAAATTATATATGTCAAATGTTAAGGCAAGA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGAAATTTAATTCTAAAAATTATATATGTCAAATGTTAAGGCAAGA  737

seq1  TAGCATATCTAGAAGCTGAATCAGTCTTATTTTTGATCCTGCTATGTATA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATATCTAGAAGCTGAATCAGTCTTATTTTTGATCCTGCTATGTATA  787

seq1  TGAAGATTGTACACTGTTATATTCCATAAAGATTGCATTCACATCATAGT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATTGTACACTGTTATATTCCATAAAGATTGCATTCACATCATAGT  837

seq1  CTTTATTATGACTTTCCTGTTGCCCCTAATGTAGAACCTCCATGGTCTTA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTATGACTTTCCTGTTGCCCCTAATGTAGAACCTCCATGGTCTTA  887

seq1  ACAAACAAATTCAAGCAATTCTTTGGACTGTCTTTTTCTTTTCTTTAATT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAATTCAAGCAATTCTTTGGACTGTCTTTTTCTTTTCTTTAATT  937

seq1  GCTATTGTTTTATATGTATGCATATTCTTTATATAATATATGTATATATA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTGTTTTATATGTATGCATATTCTTTATATAATATATGTATATATA  987

seq1  CACATTCACATATATACATGTATTATCTGAGGGCATACTTTTTTATTGTT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTCACATATATACATGTATTATCTGAGGGCATACTTTTTTATTGTT  1037

seq1  GATCACTTGGTATTAGATAACCAGTTTTGGAGATTATTCCTAGGGGAGAT  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACTTGGTATTAGATAACCAGTTTTGGAGATTATTCCTAGGGGAGAT  1087

seq1  GATTTTTCCTCCCTAAATAATCATTAATTGCGTACAGCTTTTCATCAAGG  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTCCTCCCTAAATAATCATTAATTGCGTACAGCTTTTCATCAAGG  1137

seq1  TCTAAGAGATTTCTCCACCCATGTTGGCAGGTCAACTGACATTGTCACTT  1190
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGAGATTTCTCCACCCATGTTGGCAGGTCAACTGACATTGTCACTT  1187

seq1  TTCAGACCCGATTTAGGCAATCATAATGTTGTAATGTCATGGATTAGCTA  1240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGACCCGATTTAGGCAATCATAATGTTGTAATGTCATGGATTAGCTA  1237

seq1  CCCTGTCATATAGAATTC  1258
      ||||||||||||||||||
seq2  CCCTGTCATATAGAATTC  1255