BAC Information

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BAC

Clone NameB6Ng01-043B10
Chromosome1 (Build37)
Map Location 69,353,813 - 69,549,848
singlet/doubletdoublet
Overlap geneEG241084
Upstream geneErbb4, LOC667842
Downstream geneIkzf2, Spag16
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043B10.bB6Ng01-043B10.g
ACCDH869262DH869263
length1,1091,133
definitionDH869262|Mus musculus domesticus DNA, BAC clone: B6Ng01-043B10, 5' end.DH869263|Mus musculus domesticus DNA, BAC clone: B6Ng01-043B10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,353,813 - 69,354,931)(69,548,712 - 69,549,848)
sequence
gaattccagatgggcagctttcagctctcacattgagctaccaatcaagc
cgtgatcacaaaatctattagaaggttgcggctactctcatccatttcct
catactctcatactacagttaagaaagtaaactgcaaggggcagaggtag
caaaagtcttgctaaagactctacagtgacattctagataacatgatatt
tcaaccaggtaaattctgagtagattacagaaaagggacagtgtgttctc
ccaaagaccctgcagacactgtgtacttgtttatagggatggtgcttgat
gaattagaacacatttatagcagagcattgtgtcctagacttcatgccga
ttttaatttctgtagcaagactagccgaaaagaagaaaacacctctcctg
cactgtgacaattttattctattaagtttcagaatattctctccattgtt
ttagtgatgttgggactaagtcaatggagttctaatgaagtttccactgg
ctgaaaattgttcttacaatctgcagacttagataaaatttcctaaaggg
tttctcccatgatttatcatgacctgaaatgaactggagttgaggtaaaa
ggtggtgtgtacattgtttcttttatcttgaattattaagtcttccacat
ggtgtgatagtaaatgcacctgggtctgacggcagaatgacagcaattgc
ataaaaatatcataccaagaaaaaatttatataaaatttctataactttt
acagtggtggcactttgtctgatgcattaattcatttaaaagatagccaa
gaaatgaaatttaattttttgtgcatgttttgtatttgagacaatgtctt
actcttgtagcacaggctatttcctatttccttatgatcctcctgcctct
acttcacccgtgcaccactgtgcctgactcaatactacttctaaaaaaaa
aatcacctttcacctgcatgagtttagaaaggacttggggtagcaagctc
agtgtggagttcagcccatggactgatgacactttccaatgaagcagtta
cattttcattagcaatgatagtcagaagactattggtaaccctgatctaa
tccccttag
gaattcacctctcacaccgacacaccttgacatttgcctgtgtgttaaaa
attaagtgttggattcacagccacacttcctactccacttacacagctca
gggttgaagctctctgtcctcactcccaaaggaacactcccttcacagaa
actgacaccgagtgttctgggttttgaataacaccaggaggataagattc
caggtctgcgatcagcaactcctgtgtcggatttgcagtcctcctaaatg
ttccatggagggcaggacctattttcaggaaccaactggaaaatttacag
tgttgttataacaaactcgaagatactactgacagagaggtgactatgct
gtgttggctttagacagatagtctagtttgaaaggatatccctactcaca
acaaaagagggttatttacatgttaaaatgttttaacgtagtcttaaata
attttttccatgaatttctctcagtgtaaaagtaattagctctccttgcg
ctagcccatatccttaatgagtccccgactctgtaggacacatccagatt
ccagacatctgaagtttgggtatctgagggataaaggacatcatgatagg
caaattttaaaaagtaagtcctaatttgtggacagaataaatcatgatgt
ttaccttgaatcaatagctcacaatcatgactctcatgggattttatgca
tatttattattatccagactttctagtcatgagtgtgcatcatctgtatt
actgctatcttttgctctagcacaatgagaatatgaagaaggtagacacc
acgcccacctaccaccatcccttccttccttttatacttaaggaaggatg
tgtccttttagaacctgtcttctcagtaaccgtggtatcatgatgcaaat
tgttctagtgacaaagaattatatttcagaatcccttgccaggttgaaac
aaaccaggaaagaaacgcactgattggacattcctggacaggaaacaaca
cccactacagaaaggagtacacctgatggacaattctaggccagtgtgaa
tgagagaaggggggaaaagggcttacagttacctattaaaagatcccacg
actgaccaaagaggattgaatgtgtgtagctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_69353813_69354931
seq2: B6Ng01-043B10.b_45_1153

seq1  GAATTCCAGATGGGCAGCTTTCAGCTCTCACATTGAGCTACCAATCAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGATGGGCAGCTTTCAGCTCTCACATTGAGCTACCAATCAAGC  50

seq1  CGTGATCACAAAATCTATTAGAAGGTTGCGGCTACTCTCATCCATTTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGATCACAAAATCTATTAGAAGGTTGCGGCTACTCTCATCCATTTCCT  100

seq1  CATACTCTCATACTACAGTTAAGAAAGTAAACTGCAAGGGGCAGAGGTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTCTCATACTACAGTTAAGAAAGTAAACTGCAAGGGGCAGAGGTAG  150

seq1  CAAAAGTCTTGCTAAAGACTCTACAGTGACATTCTAGATAACATGATATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGTCTTGCTAAAGACTCTACAGTGACATTCTAGATAACATGATATT  200

seq1  TCAACCAGGTAAATTCTGAGTAGATTACAGAAAAGGGACAGTGTGTTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCAGGTAAATTCTGAGTAGATTACAGAAAAGGGACAGTGTGTTCTC  250

seq1  CCAAAGACCCTGCAGACACTGTGTACTTGTTTATAGGGATGGTGCTTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGACCCTGCAGACACTGTGTACTTGTTTATAGGGATGGTGCTTGAT  300

seq1  GAATTAGAACACATTTATAGCAGAGCATTGTGTCCTAGACTTCATGCCGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAGAACACATTTATAGCAGAGCATTGTGTCCTAGACTTCATGCCGA  350

seq1  TTTTAATTTCTGTAGCAAGACTAGCCGAAAAGAAGAAAACACCTCTCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATTTCTGTAGCAAGACTAGCCGAAAAGAAGAAAACACCTCTCCTG  400

seq1  CACTGTGACAATTTTATTCTATTAAGTTTCAGAATATTCTCTCCATTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTGACAATTTTATTCTATTAAGTTTCAGAATATTCTCTCCATTGTT  450

seq1  TTAGTGATGTTGGGACTAAGTCAATGGAGTTCTAATGAAGTTTCCACTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGATGTTGGGACTAAGTCAATGGAGTTCTAATGAAGTTTCCACTGG  500

seq1  CTGAAAATTGTTCTTACAATCTGCAGACTTAGATAAAATTTCCTAAAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAATTGTTCTTACAATCTGCAGACTTAGATAAAATTTCCTAAAGGG  550

seq1  TTTCTCCCATGATTTATCATGACCTGAAATGAACTGGAGTTGAGGTAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCCATGATTTATCATGACCTGAAATGAACTGGAGTTGAGGTAAAA  600

seq1  GGTGGTGTGTACATTGTTTCTTTTATCTTGAATTATTAAGTCTTCCACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTGTGTACATTGTTTCTTTTATCTTGAATTATTAAGTCTTCCACAT  650

seq1  GGTGTGATAGTAAATGCACCTGGGTCTGACGGCAGAATGACAGCAATTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGATAGTAAATGCACCTGGGTCTGACGGCAGAATGACAGCAATTGC  700

seq1  ATAAAAATATCATACCAAGAAAAAATTTATATAAAATTTCTATAACTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAATATCATACCAAGAAAAAATTTATATAAAATTTCTATAACTTTT  750

seq1  ACAGTGGTGGCACTTTGTCTGATGCATTAATTCATTTAAAAGATAGCCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGGTGGCACTTTGTCTGATGCATTAATTCATTTAAAAGATAGCCAA  800

seq1  GAAATGAAATTTAATTTTTTGTGCATGTTTTGTATTTTGAGACAATGTCT  850
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GAAATGAAATTTAATTTTTTGTGCATGTTTTGTA-TTTGAGACAATGTCT  849

seq1  TACTCTTGTAGCACAGGCTATTTCCTAATTCCTTATGATCCTCCTGCCTC  900
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TACTCTTGTAGCACAGGCTATTTCCTATTTCCTTATGATCCTCCTGCCTC  899

seq1  TACTTCACCCGTGCACCACTGTGCCTGACTCAATACTACTTCTAAAAAAA  950
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TACTTCACCCGTGCACCACTGTGCCTGACTCAATACTACTTCT-AAAAAA  948

seq1  AAAATCACCTTTCACCTGCAGTGAGTTTAGAAAGGGACTTGGGGTAGCAA  1000
      |||||||||||||||||||| |||||||||||| ||||||||||||||||
seq2  AAAATCACCTTTCACCTGCA-TGAGTTTAGAAA-GGACTTGGGGTAGCAA  996

seq1  GCTCAGTGGTGGAGTTCAGCCCATTGGACTGATGACACTTTCCAATGAAG  1050
      ||||||| ||||||||||||||| ||||||||||||||||||||||||||
seq2  GCTCAGT-GTGGAGTTCAGCCCA-TGGACTGATGACACTTTCCAATGAAG  1044

seq1  CAGTTACCATTTTCTATAGCAATGATAAGTCAG-AGACTAATTGGGTACA  1099
      |||||| |||||||  |||||||||| |||||| ||||| |||||  || 
seq2  CAGTTA-CATTTTCATTAGCAATGAT-AGTCAGAAGACT-ATTGGTAACC  1091

seq1  CTGATCCTAATCCCACTTAG  1119
      ||||| |||||||| |||||
seq2  CTGAT-CTAATCCC-CTTAG  1109

seq1: chr1_69548712_69549848
seq2: B6Ng01-043B10.g_69_1201 (reverse)

seq1  CCAGCTTAACCACAATCAATCCTCTTTTGTTCACTC-TTGGATCTTTAAA  49
      ||||| ||  |||| ||||||||| |||| ||| || | |||||||| ||
seq2  CCAGC-TACACACATTCAATCCTC-TTTGGTCAGTCGTGGGATCTTTTAA  48

seq1  TAGATAACTGTAAGCCCTTTTCCCCCCTTCTCTCATTCACACTTGCCTAG  99
      ||| ||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TAGGTAACTGTAAGCCCTTTTCCCCCCTTCTCTCATTCACACTGGCCTAG  98

seq1  AATTGTCCAATCA-GTGTACTCCTTTCTGTAGTGGGTGTTTGTTTCCTTG  148
      |||||||| |||| |||||||||||||||||||||||| |||||||| ||
seq2  AATTGTCC-ATCAGGTGTACTCCTTTCTGTAGTGGGTG-TTGTTTCC-TG  145

seq1  TCCAGGATTGTCCAATCAGTGCGTTTCTTTCCTTGGTTTGTTTTCAACCT  198
      ||||||| |||||||||||||||||||||||| ||||||| |||||||||
seq2  TCCAGGAATGTCCAATCAGTGCGTTTCTTTCC-TGGTTTG-TTTCAACCT  193

seq1  GGCATGGAATTCTGAAATATAATTCTTTGTCACTAGAAC-ATTTGCATCA  247
      |||| || ||||||||||||||||||||||||||||||| ||||||||||
seq2  GGCAAGGGATTCTGAAATATAATTCTTTGTCACTAGAACAATTTGCATCA  243

seq1  TGATACCACGTTTACTTGAG-AGACAGGTTCTAAAAGGACACATCCTTCC  296
      |||||||||| |||| |||| |||||||||||||||||||||||||||||
seq2  TGATACCACGGTTAC-TGAGAAGACAGGTTCTAAAAGGACACATCCTTCC  292

seq1  TTAAGTATAAAATGGAGGAAGGGATGGTGGTAGGTGGGCGTGGTGTCTAC  346
      |||||||||||| | |||||||||||||||||||||||||||||||||||
seq2  TTAAGTATAAAAGGAAGGAAGGGATGGTGGTAGGTGGGCGTGGTGTCTAC  342

seq1  CTTCTTCATATTCTCATTGTGCTAGAGCAAAAGATAGCAGTAATACAGAT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCATATTCTCATTGTGCTAGAGCAAAAGATAGCAGTAATACAGAT  392

seq1  GATGCACACTCATGACTAGAAAGTCTGGATAATAATAAATATGCATAAAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCACACTCATGACTAGAAAGTCTGGATAATAATAAATATGCATAAAA  442

seq1  TCCCATGAGAGTCATGATTGTGAGCTATTGATTCAAGGTAAACATCATGA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATGAGAGTCATGATTGTGAGCTATTGATTCAAGGTAAACATCATGA  492

seq1  TTTATTCTGTCCACAAATTAGGACTTACTTTTTAAAATTTGCCTATCATG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCTGTCCACAAATTAGGACTTACTTTTTAAAATTTGCCTATCATG  542

seq1  ATGTCCTTTATCCCTCAGATACCCAAACTTCAGATGTCTGGAATCTGGAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCTTTATCCCTCAGATACCCAAACTTCAGATGTCTGGAATCTGGAT  592

seq1  GTGTCCTACAGAGTCGGGGACTCATTAAGGATATGGGCTAGCGCAAGGAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCTACAGAGTCGGGGACTCATTAAGGATATGGGCTAGCGCAAGGAG  642

seq1  AGCTAATTACTTTTACACTGAGAGAAATTCATGGAAAAAATTATTTAAGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAATTACTTTTACACTGAGAGAAATTCATGGAAAAAATTATTTAAGA  692

seq1  CTACGTTAAAACATTTTAACATGTAAATAACCCTCTTTTGTTGTGAGTAG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACGTTAAAACATTTTAACATGTAAATAACCCTCTTTTGTTGTGAGTAG  742

seq1  GGATATCCTTTCAAACTAGACTATCTGTCTAAAGCCAACACAGCATAGTC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATCCTTTCAAACTAGACTATCTGTCTAAAGCCAACACAGCATAGTC  792

seq1  ACCTCTCTGTCAGTAGTATCTTCGAGTTTGTTATAACAACACTGTAAATT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTCTGTCAGTAGTATCTTCGAGTTTGTTATAACAACACTGTAAATT  842

seq1  TTCCAGTTGGTTCCTGAAAATAGGTCCTGCCCTCCATGGAACATTTAGGA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGTTGGTTCCTGAAAATAGGTCCTGCCCTCCATGGAACATTTAGGA  892

seq1  GGACTGCAAATCCGACACAGGAGTTGCTGATCGCAGACCTGGAATCTTAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGCAAATCCGACACAGGAGTTGCTGATCGCAGACCTGGAATCTTAT  942

seq1  CCTCCTGGTGTTATTCAAAACCCAGAACACTCGGTGTCAGTTTCTGTGAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTGGTGTTATTCAAAACCCAGAACACTCGGTGTCAGTTTCTGTGAA  992

seq1  GGGAGTGTTCCTTTGGGAGTGAGGACAGAGAGCTTCAACCCTGAGCTGTG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTGTTCCTTTGGGAGTGAGGACAGAGAGCTTCAACCCTGAGCTGTG  1042

seq1  TAAGTGGAGTAGGAAGTGTGGCTGTGAATCCAACACTTAATTTTTAACAC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGGAGTAGGAAGTGTGGCTGTGAATCCAACACTTAATTTTTAACAC  1092

seq1  ACAGGCAAATGTCAAGGTGTGTCGGTGTGAGAGGTGAATTC  1137
      |||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCAAATGTCAAGGTGTGTCGGTGTGAGAGGTGAATTC  1133