BAC Information

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BAC

Clone NameB6Ng01-043K04
Chromosome1 (Build37)
Map Location 68,414,343 - 68,485,197
singlet/doubletdoublet
Overlap geneErbb4
Upstream geneKif22-ps
Downstream geneLOC667842, EG241084
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043K04.bB6Ng01-043K04.g
ACCDH869639DH869640
length1,2261,011
definitionDH869639|Mus musculus domesticus DNA, BAC clone: B6Ng01-043K04, 5' end.DH869640|Mus musculus domesticus DNA, BAC clone: B6Ng01-043K04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,483,966 - 68,485,197)(68,414,343 - 68,415,321)
sequence
gaattccaatggtttccccagcctttatatataatagtcctattagtaag
tcaatgagaaaaagtctttcctgagatttgtgactactctgaggataaag
gctgacttgtgatttgggaaacgttagtaatgaaatagagtaacaagatt
tttgcttctttcctgttgctagagatctagtcaatggcattgtgcatgct
aggcaatctcactagaactggattgcatccccagaactaaatattttaac
aaggctatgaataacacctagcatttcccaactgaaatagaaagcccaga
gaatagcaaacatagtttgatccttcctggggtaaagaaatctcttttga
tattagactgaagttatttgaagtagacactggttatattgttgactacc
tggcagatcgttcttattgtcattgtatcataaatagtgaccctttctgt
catttaattcgcaacacttgagacctgtaaggcttagttaaaactgaatt
aaattttattatattattaattacagaaatattaaaatttagttcacgta
aagtgatacaaatgagccagaaattggaagagattgccagaattagtttg
aagccaagcagagtaattcagtatgaagccgggagagagacctatttgaa
tcagccagcctggagaggaatttgggccagaacagtttagttgaaccaaa
taaccagagtttagaaagagctacaaagagtgagtttgttctgcggtaag
cctttaagatgacaattacattctgtgaataaaagttgcatttacactgt
ttcaaggtctctctctaaggatgtcagcaagaaaatcgaagcattcatgt
ttgagggtacttaaaattcacaaagctaaacatttcagagctgttgaaga
acatgtaacagataagattagaagcaatttgatacattatagaaatacaa
ggagttaatttgtttggaatgaataattcatttattttttatatataaaa
tttatatcttgcgcattgtgatgaataagatagaaacacccttttcctta
ttaaaaacaaaacaaacaaaccaaacaaaacaaaacaaacaaaaaaaagc
attctagggctagaaaacagatcacctggttgaactttatctaacagccg
aaaatccctggtatcaatcatagcgacataaacaagcatgaacagtgaat
tccctgcaattcccagcctcttggga
gaattcaaggagctctcaggaacacaggggcagttggaggaaagtgagtg
cagggtagagataatataagtgcagtagtgatttatggagtcctgaaacc
agaacaaaacaatacactcaaacccctaaatccaagaagctgtagattct
ttaaaaaagaaattcatgtattagaaagtgataaattcataaaattaata
gagaatcagaatatgaaggacttaacatattattcattttttagatgatg
tacctttgaataaatgtatagatcaaacagatgttataagtgaaaaataa
agttaaatgtatactatagtttgtattgaatatgttctaaaacttatgat
attaatgacatggtccctaactcacggtatcatttgaaaacagtagacac
taaaaaagtgagggctgcggggacagtttctagtactaggagggtactcc
tcttgaggatgatttgatcctgacctcttttttttattagatattttctt
catttacatttcaaatgctatcccaaaagtcccctataccctccctctgc
cctgctcccctacccacatactaccacttcttggccctggcattcccctg
tactggggcatataacatttgctagaccacagggcctctcttcccaatga
tggccatctaggccatcttctgctacatatgcagctagagacacaagctc
tgggggtactgattagttcatatttttgttccacctatagggttgcagac
ccctccagctccttgggtacttgctctagctcctccattgggggccttgt
gttccatccaatagctgactgtgagcatccacttctgtgtttgccaggca
ctggcatagtctcacatgagacaactatatcagggtcctttcagcaaatc
ttgctggcatatggaatcgtgtatgcatttggtggctgatcatgggatgg
accccgcatggggaagtctctgtatggtcatccttttgtctagctcaact
ttgcatctgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_68483966_68485197
seq2: B6Ng01-043K04.b_45_1270 (reverse)

seq1  TCCCAAGA-GCTGGG-ATTGCAGGG-ATTCACTG-TCATGCTTGTTTTAT  46
      |||||||| |||||| ||||||||| |||||||| ||||||||| |||||
seq2  TCCCAAGAGGCTGGGAATTGCAGGGAATTCACTGTTCATGCTTG-TTTAT  49

seq1  GTCTGCTATGGATTGATACCA-GGATTTTCTGCTTGTTAGATAAAGTTCT  95
      ||| ||||| ||||||||||| |||||||| || ||||||||||||||| 
seq2  GTC-GCTAT-GATTGATACCAGGGATTTTCGGC-TGTTAGATAAAGTTCA  96

seq1  ACCAGTTGATCTGTTTTCTAGCCCTAGAATGCTTTTTTTTGTTTTGTTTT  145
      ||||| ||||||||||||||||||||||||||||||||||| ||||||||
seq2  ACCAGGTGATCTGTTTTCTAGCCCTAGAATGCTTTTTTTTG-TTTGTTTT  145

seq1  GTTTTTGTTTTGTTTTGTTTTGTTTTGTTTTTTAATAAGGAAAAGGGTGT  195
      | |||||||| ||||   ||||||||| ||||||||||||||||||||||
seq2  G-TTTTGTTTGGTTT--GTTTGTTTTG-TTTTTAATAAGGAAAAGGGTGT  191

seq1  TTCTTATCTTATTCATCACAATGCCGCAAGATATAAATTTTATATATAAA  245
      ||| ||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TTC-TATCTTATTCATCACAATG-CGCAAGATATAAATTTTATATATAAA  239

seq1  AAATAAATGAATTATTCATTCCAAACAAATTAACTCCTTGTATTTCTATA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATGAATTATTCATTCCAAACAAATTAACTCCTTGTATTTCTATA  289

seq1  ATGTATCAAATTGCTTCTAATCTTATCTGTTACATGTTCTTCAACAGCTC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATCAAATTGCTTCTAATCTTATCTGTTACATGTTCTTCAACAGCTC  339

seq1  TGAAATGTTTAGCTTTGTGAATTTTAAGTACCCTCAAACATGAATGCTTC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGTTTAGCTTTGTGAATTTTAAGTACCCTCAAACATGAATGCTTC  389

seq1  GATTTTCTTGCTGACATCCTTAGAGAGAGACCTTGAAACAGTGTAAATGC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTCTTGCTGACATCCTTAGAGAGAGACCTTGAAACAGTGTAAATGC  439

seq1  AACTTTTATTCACAGAATGTAATTGTCATCTTAAAGGCTTACCGCAGAAC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTATTCACAGAATGTAATTGTCATCTTAAAGGCTTACCGCAGAAC  489

seq1  AAACTCACTCTTTGTAGCTCTTTCTAAACTCTGGTTATTTGGTTCAACTA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCACTCTTTGTAGCTCTTTCTAAACTCTGGTTATTTGGTTCAACTA  539

seq1  AACTGTTCTGGCCCAAATTCCTCTCCAGGCTGGCTGATTCAAATAGGTCT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTTCTGGCCCAAATTCCTCTCCAGGCTGGCTGATTCAAATAGGTCT  589

seq1  CTCTCCCGGCTTCATACTGAATTACTCTGCTTGGCTTCAAACTAATTCTG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCGGCTTCATACTGAATTACTCTGCTTGGCTTCAAACTAATTCTG  639

seq1  GCAATCTCTTCCAATTTCTGGCTCATTTGTATCACTTTACGTGAACTAAA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCTCTTCCAATTTCTGGCTCATTTGTATCACTTTACGTGAACTAAA  689

seq1  TTTTAATATTTCTGTAATTAATAATATAATAAAATTTAATTCAGTTTTAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATATTTCTGTAATTAATAATATAATAAAATTTAATTCAGTTTTAA  739

seq1  CTAAGCCTTACAGGTCTCAAGTGTTGCGAATTAAATGACAGAAAGGGTCA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCCTTACAGGTCTCAAGTGTTGCGAATTAAATGACAGAAAGGGTCA  789

seq1  CTATTTATGATACAATGACAATAAGAACGATCTGCCAGGTAGTCAACAAT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTATGATACAATGACAATAAGAACGATCTGCCAGGTAGTCAACAAT  839

seq1  ATAACCAGTGTCTACTTCAAATAACTTCAGTCTAATATCAAAAGAGATTT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCAGTGTCTACTTCAAATAACTTCAGTCTAATATCAAAAGAGATTT  889

seq1  CTTTACCCCAGGAAGGATCAAACTATGTTTGCTATTCTCTGGGCTTTCTA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACCCCAGGAAGGATCAAACTATGTTTGCTATTCTCTGGGCTTTCTA  939

seq1  TTTCAGTTGGGAAATGCTAGGTGTTATTCATAGCCTTGTTAAAATATTTA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTTGGGAAATGCTAGGTGTTATTCATAGCCTTGTTAAAATATTTA  989

seq1  GTTCTGGGGATGCAATCCAGTTCTAGTGAGATTGCCTAGCATGCACAATG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGGGGATGCAATCCAGTTCTAGTGAGATTGCCTAGCATGCACAATG  1039

seq1  CCATTGACTAGATCTCTAGCAACAGGAAAGAAGCAAAAATCTTGTTACTC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGACTAGATCTCTAGCAACAGGAAAGAAGCAAAAATCTTGTTACTC  1089

seq1  TATTTCATTACTAACGTTTCCCAAATCACAAGTCAGCCTTTATCCTCAGA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCATTACTAACGTTTCCCAAATCACAAGTCAGCCTTTATCCTCAGA  1139

seq1  GTAGTCACAAATCTCAGGAAAGACTTTTTCTCATTGACTTACTAATAGGA  1195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTCACAAATCTCAGGAAAGACTTTTTCTCATTGACTTACTAATAGGA  1189

seq1  CTATTATATATAAAGGCTGGGGAAACCATTGGAATTC  1232
      |||||||||||||||||||||||||||||||||||||
seq2  CTATTATATATAAAGGCTGGGGAAACCATTGGAATTC  1226

seq1: chr1_68414343_68415321
seq2: B6Ng01-043K04.g_64_1040

seq1  GAATTCAAGGAGCTCTCAGGAACACAGGGGCAGTTGGAGGAAAGTGAGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGAGCTCTCAGGAACACAGGGGCAGTTGGAGGAAAGTGAGTG  50

seq1  CAGGGTAGAGATAATATAAGTGCAGTAGTGATTTATGGAGTCCTGAAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTAGAGATAATATAAGTGCAGTAGTGATTTATGGAGTCCTGAAACC  100

seq1  AGAACAAAACAATACACTCAAACCCCTAAATCCAAGAAGCTGTAGATTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAAAACAATACACTCAAACCCCTAAATCCAAGAAGCTGTAGATTCT  150

seq1  TTAAAAAAGAAATTCATGTATTAGAAAGTGATAAATTCATAAAATTAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAAGAAATTCATGTATTAGAAAGTGATAAATTCATAAAATTAATA  200

seq1  GAGAATCAGAATATGAAGGACTTAACATATTATTCATTTTTTAGATGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATCAGAATATGAAGGACTTAACATATTATTCATTTTTTAGATGATG  250

seq1  TACCTTTGAATAAATGTATAGATCAAACAGATGTTATAAGTGAAAAATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTTGAATAAATGTATAGATCAAACAGATGTTATAAGTGAAAAATAA  300

seq1  AGTTAAATGTATACTATAGTTTGTATTGAATATGTTCTAAAACTTATGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAATGTATACTATAGTTTGTATTGAATATGTTCTAAAACTTATGAT  350

seq1  ATTAATGACATGGTCCCTAACTCACGGTATCATTTGAAAACAGTAGACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATGACATGGTCCCTAACTCACGGTATCATTTGAAAACAGTAGACAC  400

seq1  TAAAAAAGTGAGGGCTGCGGGGACAGTTTCTAGTACTAGGAGGGTACTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAGTGAGGGCTGCGGGGACAGTTTCTAGTACTAGGAGGGTACTCC  450

seq1  TCTTGAGGATGATTTGATCCTGACCTCTTTTTTTTATTAGATATTTTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAGGATGATTTGATCCTGACCTCTTTTTTTTATTAGATATTTTCTT  500

seq1  CATTTACATTTCAAATGCTATCCCAAAAGTCCCCTATACCCTCCCTCTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTACATTTCAAATGCTATCCCAAAAGTCCCCTATACCCTCCCTCTGC  550

seq1  CCTGCTCCCCTACCCACATACTACCACTTCTTGGCCCTGGCATTCCCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTCCCCTACCCACATACTACCACTTCTTGGCCCTGGCATTCCCCTG  600

seq1  TACTGGGGCATATAACATTTGCTAGACCACAGGGCCTCTCTTCCCAATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGGGCATATAACATTTGCTAGACCACAGGGCCTCTCTTCCCAATGA  650

seq1  TGGCCATCTAGGCCATCTTCTGCTACATATGCAGCTAGAGACACAAGCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCATCTAGGCCATCTTCTGCTACATATGCAGCTAGAGACACAAGCTC  700

seq1  TGGGGGTACTGATTAGTTCATATTTTTGTTCCACCTATAGGGTTGCAGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGTACTGATTAGTTCATATTTTTGTTCCACCTATAGGGTTGCAGAC  750

seq1  CCCTCCAGCTCCTTGGGTACTTGCTCTAGCTCCTCCATTGGGGGCCTTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCAGCTCCTTGGGTACTTGCTCTAGCTCCTCCATTGGGGGCCTTGT  800

seq1  GTTCCATCCAATAGCTGACTGTGAGCATCCACTTCTGTGTTTGCCAGGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCATCCAATAGCTGACTGTGAGCATCCACTTCTGTGTTTGCCAGGCA  850

seq1  CTGGCATAGTCTCACATGAGACAACTATATCAGGGTCCTTTCAGCAAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CTGGCATAGTCTCACATGAGACAACTATATCAGGGTCCTTTCAGC-AAAT  899

seq1  CTTGCTGGCATATGGAATCGTGTATGCATTTGGTGGCTGATCATGGGATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTGGCATATGGAATCGTGTATGCATTTGGTGGCTGATCATGGGATG  949

seq1  GACCCCCGCATGGGGAAGTCTCTGTATGG  979
      || ||||||||||||||||||||||||||
seq2  GA-CCCCGCATGGGGAAGTCTCTGTATGG  977