BAC Information

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BAC

Clone NameB6Ng01-043M17
Chromosome1 (Build37)
Map Location 113,253,139 - 113,254,185
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041429, EG626652, Cdh19
Downstream geneEG666578, Dsel, LOC547247, EG626897, LOC666615
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043M17.bB6Ng01-043M17.g
ACCDH869747DH869748
length1,0481,019
definitionDH869747|Mus musculus domesticus DNA, BAC clone: B6Ng01-043M17, 5' end.DH869748|Mus musculus domesticus DNA, BAC clone: B6Ng01-043M17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagccatatgtttgctcacatctgttggtttgccacttaaggaa
aatattcaattccagatgtgggtgtgttttgtcagtgaatattaattcat
atgttcatcaagaccaggagctgtatgtttattttccctatataacactt
aaatagtgtttatataaaccatacaaatccaataaattacttgctacaga
atgcatcttccattctttagcccctagttggctttttttttttttgctac
ctgaaatttgaggtacacatttcaattagatgcctgttaatgtcaaagag
agatttgttataataaacaatttattatgtttttttctgaaaccataaaa
tagtatttaatatttagttatatttggagattactctgtcatattgtgta
attaagaagatgtaatatacatgtataatgatggagtatattctagaaat
aatgattctattactcataatttataaataatttgaggaagaaattcagg
atgaaaatcacatcactacataactaataaaatgatgtaaatataaagac
tgcttacatgatcttttacactttaaactgaatgttcataatgatttata
aaacaaattttcaattttccttttactgacattactcaaacaaaagtttg
aactgaaaatgataggtgaattgacatcgtgaatttttagtccttgcttc
tatgattataccatatgatctttagttaaataaacttagttcattggctt
tgagatccaatttttaaatactggctagcatctcctgttttataatttac
acaaccaggttttgacctcatctcaccaaataggttttattagctttatc
ttatacatgagaaaaggaatacaaatattataattataaacaatatgaga
ctatattatatatgtgtcttttaaataatcttaataattataatttgtta
tactttacagatatataagacagtaaaactatcatacacaaaatgctttt
gtagaaattaaaatatgtgtgtatattatatgtaataattgtatatta
gaattctcacataaggaatactgaatggcagagaagcacctgaaaaaatg
ttcaacatcctttatcatcagggaaatgcaaatcaaaacaaccctgagat
tccccctcacaccagtcagaatggctaagatcaaaaatgcaggtgacagc
agatgctggcaaggaagtggagaaagaggaacactcctctattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatcccacaatacctctcctgggt
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gctcctcaacagaggaatggattcagaacatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggaatcatcctgagtgaggcaacccaatcacaaa
agaactcaaatgaaatgtactcactgataagtggatattaacccagaaac
ttagtatagcgagatatgaggtacaatatgtaaaacacatgaaactgaag
aagaacgaagaccaaagtgtggacactgtgcccctttcttagaattggga
acaaaacacccatggaaggagttacagagacaaaatttggagctgtgacg
aaaggatggaccatcttgtgattgccatatccaggatccatcccacaatc
agcttccaaacgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatagagctgtctcttgtgaatctataccgggcttagcaaaca
cagaagtggatgctcacagttagcaatggatggatccagagcccccatgg
aaggagctagagaaagtaccaggagctaaatgaatctgcatcccttaggt
gaacaccttttgaactatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_113253139_113254185
seq2: B6Ng01-043M17.b_47_1094

seq1  GAATTCAAGCCATATGTTTGCTCACATCTGTTGGTTTGCCACTTAAGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGCCATATGTTTGCTCACATCTGTTGGTTTGCCACTTAAGGAA  50

seq1  AATATTCAATTCCAGATGTGGGTGTGTTTTGTCAGTGAATATTAATTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCAATTCCAGATGTGGGTGTGTTTTGTCAGTGAATATTAATTCAT  100

seq1  ATGTTCATCAAGACCAGGAGCTGTATGTTTATTTTCCCTATATAACACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCATCAAGACCAGGAGCTGTATGTTTATTTTCCCTATATAACACTT  150

seq1  AAATAGTGTTTATATAAACCATACAAATCCAATAAATTACTTGCTACAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGTGTTTATATAAACCATACAAATCCAATAAATTACTTGCTACAGA  200

seq1  ATGCATCTTCCATTCTTTAGCCCCTAGTTGGCTTTTTTTTTTTTTGCTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATCTTCCATTCTTTAGCCCCTAGTTGGCTTTTTTTTTTTTTGCTAC  250

seq1  CTGAAATTTGAGGTACACATTTCAATTAGATGCCTGTTAATGTCAAAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAATTTGAGGTACACATTTCAATTAGATGCCTGTTAATGTCAAAGAG  300

seq1  AGATTTGTTATAATAAACAATTTATTATGTTTTTTTCTGAAACCATAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTGTTATAATAAACAATTTATTATGTTTTTTTCTGAAACCATAAAA  350

seq1  TAGTATTTAATATTTAGTTATATTTGGAGATTACTCTGTCATATTGTGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATTTAATATTTAGTTATATTTGGAGATTACTCTGTCATATTGTGTA  400

seq1  ATTAAGAAGATGTAATATACATGTATAATGATGGAGTATATTCTAGAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGAAGATGTAATATACATGTATAATGATGGAGTATATTCTAGAAAT  450

seq1  AATGATTCTATTACTCATAATTTATAAATAATTTGAGGAAGAAATTCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATTCTATTACTCATAATTTATAAATAATTTGAGGAAGAAATTCAGG  500

seq1  ATGAAAATCACATCACTACATAACTAATAAAATGATGTAAATATAAAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAATCACATCACTACATAACTAATAAAATGATGTAAATATAAAGAC  550

seq1  TGCTTACATGATCTTTTACACTTTAAACTGAATGTTCATAATGATTTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTACATGATCTTTTACACTTTAAACTGAATGTTCATAATGATTTATA  600

seq1  AAACAAATTTTCAATTTTCCTTTTACTGACATTACTCAAACAAAAGTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAATTTTCAATTTTCCTTTTACTGACATTACTCAAACAAAAGTTTG  650

seq1  AACTGAAAATGATAGGTGAATTGACATCGTGAATTTTTAGTCCTTGCTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAAAATGATAGGTGAATTGACATCGTGAATTTTTAGTCCTTGCTTC  700

seq1  TATGATTATACCATATGATCTTTAGTTAAATAAACTTAGTTCATTGGCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATTATACCATATGATCTTTAGTTAAATAAACTTAGTTCATTGGCTT  750

seq1  TGAGATCCAATTTTTAAATACTGGCTAGCATCTCCTGTTTTATAATTTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATCCAATTTTTAAATACTGGCTAGCATCTCCTGTTTTATAATTTAC  800

seq1  ACAACCAGGTTTTGACCTCATCTCACCAAATAGGTTTTATTAGCTTTATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCAGGTTTTGACCTCATCTCACCAAATAGGTTTTATTAGCTTTATC  850

seq1  TTATACATGAGAAAAGGAATACAAATATTATAATTATAAACAATATGAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACATGAGAAAAGGAATACAAATATTATAATTATAAACAATATGAGA  900

seq1  CTATATTATATATGTGTCTTTTAAATAATCTTAATAATTATATTTTGTTT  950
      |||||||||||||||||||||||||||||||||||||||||| |||| ||
seq2  CTATATTATATATGTGTCTTTTAAATAATCTTAATAATTATAATTTG-TT  949

seq1  ATACTTTACAGATAATATAAGACAGTAAAACTATCATACAC-ATATGCTT  999
      ||||||||||||| ||||||||||||||||||||||||||| | ||||||
seq2  ATACTTTACAGAT-ATATAAGACAGTAAAACTATCATACACAAAATGCTT  998

seq1  TTGTAGAAATT-ATATATGTGTGTATA-TATATGTAATATATGTATATTA  1047
      ||||||||||| | ||||||||||||| |||||||||||  |||||||||
seq2  TTGTAGAAATTAAAATATGTGTGTATATTATATGTAATAATTGTATATTA  1048