BAC Information

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BAC

Clone NameB6Ng01-043P19
Chromosome1 (Build37)
Map Location 132,514,700 - 132,515,532
singlet/doubletsinglet
Overlap geneZp3r
Upstream geneThsd7b, LOC100042745, LOC100042740, Daf2, Cd55
Downstream geneC4bp, C4bp-ps1, Pfkfb2, Yod1, AA986860, Fcamr, Pigr, Faim3, Il24, Il20, Il19, Il10, Mapkapk2, Dyrk3, Lgtn, Rassf5, Ikbke, Srgap2, LOC100042826, LOC100042821, 2700049P18Rik, Avpr1b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043P19.bB6Ng01-043P19.g
ACCDH869878DH869879
length499833
definitionDH869878|Mus musculus domesticus DNA, BAC clone: B6Ng01-043P19, 5' end.DH869879|Mus musculus domesticus DNA, BAC clone: B6Ng01-043P19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ttttttgggtagagggttaaccaaagaaacctagaaaactaaacatcaag
aaaataaacaatccaatttaaaaaaggcacagacctaaggcttcttaaaa
gaagaaatacaaacaggtgagaagtgatttttagatattcaatgggctgg
agggatggctcagtagttaagacacttattctagcagagaaccctggttc
agtctttagcacccacacagtggctcacaaatatttgtaattccagttcc
agaggatccaacaccctcatctgacctcactggcactaggtattcatact
gtgtagtgcatagccctggggctaattatatttgatgttaataacattcc
cctgtgaggggctgcgaacaaggaaagtggcaacactcaggtgatttcct
ataaacctgcttcccaccttaatttgtaaaataaaggagagctgatgatt
gggcagataaagcgaaggtggaacagaaggttgggggagggaggaagga
gaattcaattctggtattctcaactgctgagccatctcttcagccccagg
tagtatttatttttaatacaaatttattcaaacattttctttatatttga
gtaatttattacatttctgtgacagttttctgagaagaaaaattacaggg
gagaatgcacgttgatactcactggcacaaaaggtactatagacccatga
accattctcatcacaagaaagatggcttgaattgactctcttgaagccgt
gatggcaggtatatttcaggacagttccagatgggaaggttgttgactca
tacaactggttggttggagaagcaaacggtaaaaggggtggaggtccaca
atcacctggataccaaattacaaggaacaccataagctgaaccttgagag
agagaatctcaatatttgagtattaaggtttacggagcaaggaccacgca
tcgtttttatcctgattctcgctaccccaaatcaacacaatagatcatca
ttgatgtatgtgttctgtcaataacaacaacaacagtggcatagaaattt
cacctacccttccctagtcagtaatataggccaatttcattattttatca
ttgatcacatctgcctaattgaagtatgtcatgtcatgcaaattatattt
tttgcctttgtaaaaacatatctcatcatgccagattagctgtttcagaa
aacaggatagaaaagaagcatttcatttatgttcacttggagcttttgga
attggtatatgttgtctgttttaaaagagctctcaaaatcatcacaatgt
tgatactacattgaatcctttgggagggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_132514700_132515532
seq2: B6Ng01-043P19.g_69_901

seq1  GAATTCAATTCTGGTATTCTCAACTGCTGAGCCATCTCTTCAGCCCCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTCTGGTATTCTCAACTGCTGAGCCATCTCTTCAGCCCCAGG  50

seq1  TAGTATTTATTTTTAATACAAATTTATTCAAACATTTTCTTTATATTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATTTATTTTTAATACAAATTTATTCAAACATTTTCTTTATATTTGA  100

seq1  GTAATTTATTACATTTCTGTGACAGTTTTCTGAGAAGAAAAATTACAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTTATTACATTTCTGTGACAGTTTTCTGAGAAGAAAAATTACAGGG  150

seq1  GAGAATGCACGTTGATACTCACTGGCACAAAAGGTACTATAGACCCATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATGCACGTTGATACTCACTGGCACAAAAGGTACTATAGACCCATGA  200

seq1  ACCATTCTCATCACAAGAAAGATGGCTTGAATTGACTCTCTTGAAGCCGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTCTCATCACAAGAAAGATGGCTTGAATTGACTCTCTTGAAGCCGT  250

seq1  GATGGCAGGTATATTTCAGGACAGTTCCAGATGGGAAGGTTGTTGACTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCAGGTATATTTCAGGACAGTTCCAGATGGGAAGGTTGTTGACTCA  300

seq1  TACAACTGGTTGGTTGGAGAAGCAAACGGTAAAAGGGGTGGAGGTCCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACTGGTTGGTTGGAGAAGCAAACGGTAAAAGGGGTGGAGGTCCACA  350

seq1  ATCACCTGGATACCAAATTACAAGGAACACCATAAGCTGAACCTTGAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCTGGATACCAAATTACAAGGAACACCATAAGCTGAACCTTGAGAG  400

seq1  AGAGAATCTCAATATTTGAGTATTAAGGTTTACGGAGCAAGGACCACGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATCTCAATATTTGAGTATTAAGGTTTACGGAGCAAGGACCACGCA  450

seq1  TCGTTTTTATCCTGATTCTCGCTACCCCAAATCAACACAATAGATCATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTTTTATCCTGATTCTCGCTACCCCAAATCAACACAATAGATCATCA  500

seq1  TTGATGTATGTGTTCTGTCAATAACAACAACAACAGTGGCATAGAAATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGTATGTGTTCTGTCAATAACAACAACAACAGTGGCATAGAAATTT  550

seq1  CACCTACCCTTCCCTAGTCAGTAATATAGGCCAATTTCATTATTTTATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTACCCTTCCCTAGTCAGTAATATAGGCCAATTTCATTATTTTATCA  600

seq1  TTGATCACATCTGCCTAATTGAAGTATGTCATGTCATGCAAATTATATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCACATCTGCCTAATTGAAGTATGTCATGTCATGCAAATTATATTT  650

seq1  TTTGCCTTTGTAAAAACATATCTCATCATGCCAGATTAGCTGTTTCAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTTTGTAAAAACATATCTCATCATGCCAGATTAGCTGTTTCAGAA  700

seq1  AACAGGATAGAAAAGAAGCATTTCATTTATGTTCACTTGGAGCTTTTGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGATAGAAAAGAAGCATTTCATTTATGTTCACTTGGAGCTTTTGGA  750

seq1  ATTGGTATATGTTGTCTGTTTTAAAAGAGCTCTCAAAATCATCACAATGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTATATGTTGTCTGTTTTAAAAGAGCTCTCAAAATCATCACAATGT  800

seq1  TGATACTACATTGAATCCTTTGGGAGGGGGGGG  833
      |||||||||||||||||||||||||||||||||
seq2  TGATACTACATTGAATCCTTTGGGAGGGGGGGG  833