BAC Information

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BAC

Clone NameB6Ng01-044F07
Chromosome1 (Build37)
Map Location 37,215,057 - 37,216,066
singlet/doubletsinglet
Overlap gene4921511C04Rik
Upstream geneUgcgl1, LOC100041123, Lincr, Arid5a, 4632411B12Rik, 4930533C12Rik, Lman2l, Cnnm4, Cnnm3, Ankrd23, Ankrd39, Sema4c, 1700024G10Rik, BC050210, EG623414, Cox5b, Actr1b, 4933424G06Rik, Zap70, Tmem131, EG241053, A230074B11Rik
Downstream geneCnga3, Inpp4a, 6330578E17Rik, Unc50, Mgat4a, 2010300C02Rik, Tsga10, EG623661, Mitd1, Mrpl30, Gm776, 2300002O18Rik, Txndc9, EG666434, Eif5b, Rev1, EG329123
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044F07.bB6Ng01-044F07.g
ACCDH870114DH870115
length9411,005
definitionDH870114|Mus musculus domesticus DNA, BAC clone: B6Ng01-044F07, 5' end.DH870115|Mus musculus domesticus DNA, BAC clone: B6Ng01-044F07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcgcctggctctatcctagaatcctttctgcctcccagatgtcc
cacttctattccctgcctaagccataggccataggcttttttattgacag
atgatgcatccatacaatacacaagatattctttctacacttgtgtggca
gaggcaggcagatgtccttgagttagagtctgctttacatagtgagttcc
aggccagccagagctacatggtgagatcctgtctccaataacaataataa
taattttaagggggagatgaccaaatctattactcagttttactatctcc
acaacagccatggctgatttgaaaggctttttgcattccatgatgactgt
gagctcctgccaattgtcctgccatggcctcctaagagatgggattatag
gtataagtcatcatatatacaagtttttgagcacttagtattgttttaga
aagttgggtgccctactgaaggtgggcctttgtagaggaaacgggtcatg
agggcgtagcttacaggttgaagcatagactctcaggtttagacacaggt
tccctttctgcttcctggtctgctgttctgacatgagccatcggtactga
cagttcctgctgccacagccatgagccactcctgccatccgctgtgctgt
ctccacagtgatagactgtatgcctctcaatcacgagtaagccaaaataa
agcctacctcccttaagtttgcttcttgtcaggcacttgatcaaagtaac
aagaaaagtaatcaataaagactgtggctgtattgatgaccacgagtgat
aaaagtatggttgagagaataaaaatatagattacataattaaccctcag
actcactaagcaagcccaaaggcagaaacaatagatagtagtgattgcca
agtggtggtggcacagcctttaatctcagcacttgggaggc
gaattcttcactcaaacagttccttagcccatgctgatttggcccacacc
tttcttaagggacaggtgacctggttgtcatccttgcccatgacctaacc
acctgcacaccggcctagactcagtccttcctgtgcacacttatgtgaac
tttgaaggtgctcagcttctttgggaaactttttctagattctggaagct
ccacagttgggtttttgttatctacacatgagaaaggtaagtgctagaaa
tatagaggttggtgacgtggccagatgcccactgatccatccattataac
ttagggtgaggcaggtctattctgtgcccaaagcccaactcctgcccaca
gggagccacagccaacccacccctggatgactccctggtctccttcccat
cagcctccttcactgccctccccaaaggcatgcgagccccttcagtggtc
tttatagcatcctcaacccagggtcatcctcatccaaaatgaaaggagaa
ttccaggttttcttctgtatctttgatatttccatagcataaaatgaggt
acccttgggattaggctgcagtctaaacacatttatttatttatttattt
atttatttatttatttatttatttattttactatttgaaaatgatttcat
aacagaaacaaagtttcctggtgtggataggatttaccacttgtcacagt
ggcctgcgataaggttgcgatttgagtcttgttgttttggattaaggatg
ctccacctgtacctcccccgtccccctcccccgcatctttctgccttcca
tctttatcttggtagcaagatgagctatcctaagttctctgttctccctg
agtctggagtctgcatgaagctctctctttaagatactgttatctgctgt
ccctccttcctcgtggcctctgctctgaggactctcacacctctccctac
cccatgtggtctttgcacctctcagctacttcttatccacagctcactgc
tgggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_37215057_37216066
seq2: B6Ng01-044F07.g_68_1072

seq1  GAATTCTTCACTCAAACAGTTCCTTAGCCCATGCTGATTTGGCCCACACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCACTCAAACAGTTCCTTAGCCCATGCTGATTTGGCCCACACC  50

seq1  TTTCTTAAGGGACAGGTGACCTGGTTGTCATCCTTGCCCATGACCTAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTAAGGGACAGGTGACCTGGTTGTCATCCTTGCCCATGACCTAACC  100

seq1  ACCTGCACACCGGCCTAGACTCAGTCCTTCCTGTGCACACTTATGTGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCACACCGGCCTAGACTCAGTCCTTCCTGTGCACACTTATGTGAAC  150

seq1  TTTGAAGGTGCTCAGCTTCTTTGGGAAACTTTTTCTAGATTCTGGAAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGGTGCTCAGCTTCTTTGGGAAACTTTTTCTAGATTCTGGAAGCT  200

seq1  CCACAGTTGGGTTTTTGTTATCTACACATGAGAAAGGTAAGTGCTAGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTTGGGTTTTTGTTATCTACACATGAGAAAGGTAAGTGCTAGAAA  250

seq1  TATAGAGGTTGGTGACGTGGCCAGATGCCCACTGATCCATCCATTATAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAGGTTGGTGACGTGGCCAGATGCCCACTGATCCATCCATTATAAC  300

seq1  TTAGGGTGAGGCAGGTCTATTCTGTGCCCAAAGCCCAACTCCTGCCCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGTGAGGCAGGTCTATTCTGTGCCCAAAGCCCAACTCCTGCCCACA  350

seq1  GGGAGCCACAGCCAACCCACCCCTGGATGACTCCCTGGTCTCCTTCCCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCCACAGCCAACCCACCCCTGGATGACTCCCTGGTCTCCTTCCCAT  400

seq1  CAGCCTCCTTCACTGCCCTCCCCAAAGGCATGCGAGCCCCTTCAGTGGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTCCTTCACTGCCCTCCCCAAAGGCATGCGAGCCCCTTCAGTGGTC  450

seq1  TTTATAGCATCCTCAACCCAGGGTCATCCTCATCCAAAATGAAAGGAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAGCATCCTCAACCCAGGGTCATCCTCATCCAAAATGAAAGGAGAA  500

seq1  TTCCAGGTTTTCTTCTGTATCTTTGATATTTCCATAGCATAAAATGAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGGTTTTCTTCTGTATCTTTGATATTTCCATAGCATAAAATGAGGT  550

seq1  ACCCTTGGGATTAGGCTGCAGTCTAAACACATTTATTTATTTATTTATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTGGGATTAGGCTGCAGTCTAAACACATTTATTTATTTATTTATTT  600

seq1  ATTTATTTATTTATTTATTTATTTATTTTACTATTTGAAAATGATTTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTATTTATTTATTTATTTATTTTACTATTTGAAAATGATTTCAT  650

seq1  AACAGAAACAAAGTTTCCTGGTGTGGATAGGATTTACCACTTGTCACAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAAACAAAGTTTCCTGGTGTGGATAGGATTTACCACTTGTCACAGT  700

seq1  GGCCTGCGATAAGGTTGCGATTTGAGTCTTGTTGTTTTGGATTAAGGATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGCGATAAGGTTGCGATTTGAGTCTTGTTGTTTTGGATTAAGGATG  750

seq1  CTCCACCTGTACCTCCCCCGTCCCCCTCCCCCGCATCTTTCTGCCTTCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACCTGTACCTCCCCCGTCCCCCTCCCCCGCATCTTTCTGCCTTCCA  800

seq1  TCTTTATCTTGGTAGCAAGATGAGCTATCCTAAGTTCTCTGTTCTCCCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATCTTGGTAGCAAGATGAGCTATCCTAAGTTCTCTGTTCTCCCTG  850

seq1  AGTCTGGAGTCTGCATGAAGCTCTCTCTTTAAGATACTGTTATTCTGCTG  900
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AGTCTGGAGTCTGCATGAAGCTCTCTCTTTAAGATACTGTTA-TCTGCTG  899

seq1  TCCCTCCTTCCTCGTGGCCTCTGCTCTGAGGACTCTCCACACCTCTCCCT  950
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TCCCTCCTTCCTCGTGGCCTCTGCTCTGAGGACTCT-CACACCTCTCCCT  948

seq1  ACCCCATTGTGGTCTTTGCCACTCTCAGCTACTTTCTAATCCACCAGCTC  1000
      |||||| ||||||||||||  ||||||||||| |||| ||||| ||||||
seq2  ACCCCA-TGTGGTCTTTGCACCTCTCAGCTAC-TTCTTATCCA-CAGCTC  995

seq1  ACAGCTGGGC  1010
      || |||||||
seq2  ACTGCTGGGC  1005