BAC Information

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BAC

Clone NameB6Ng01-044K08
Chromosome1 (Build37)
Map Location 148,696,250 - 148,751,415
singlet/doubletdoublet
Overlap geneB830045N13Rik
Upstream geneLOC383571, LOC100043240
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044K08.bB6Ng01-044K08.g
ACCDH870340DH870341
length1,1381,129
definitionDH870340|Mus musculus domesticus DNA, BAC clone: B6Ng01-044K08, 5' end.DH870341|Mus musculus domesticus DNA, BAC clone: B6Ng01-044K08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(148,750,265 - 148,751,415)(148,696,250 - 148,697,401)
sequence
gaattcattcttttctttgtcattcagagatgccattaagatattcaaaa
gacttaccagagagttggagataattgtattttattccattcaatatgat
ttttactttatattcacattactggaagtgggtgagcactttcttaccca
tggtcataatatcttctcttcttctctccctcatgctgtccatggcatag
tcagccatgcagtaaaagatgtaaaaccattgcacatttttagttacatt
ggaaaatgtgcttatagaatccattagtaattgtgaaaggcgctgagata
atttctgggtgtcagaatcttagatcagctgaaaccatgatgattttgta
aaggtcattgtaaacatattgatgagtatgcacatgctgtgggccattga
ttatatctggtaagcaagtttattgtattttcgggagtgctgtgagttca
aatgttttacaacattatctggtttaatctaatttttttgttaccttgtt
ttattgtcaatacacacacacacacacacacacacacacacacacacata
tatacttttaaaaagatcagtggttaagatcaaagttattaaattagttc
tagaagaatctgttcaatttctcagcctgtgatcttaaagaatttaacta
actgctccaaatctagggaagaggacagtctacagccaagtgattttacc
aatacactatttgctatcacaggagagttgaagaatgtatattgcttatg
tgaaatttctattgtaatattaacatggtaggtattagatactgggcatc
atggtttgctttgccaacaagcttaatatatattctagtatctagtgact
tagtttttaaacttaaaatatatatcccaagagtcctgaatatgtgcaga
atgcttatatcattgcaatcattgttttatttagattcacgcttgtgtca
tgaatgtctctttatgtgttcttagaaagatgacctatgactttaaaaat
ttgggtcctgatagtttattttgttatatggtaaagaagtttataagctt
atatctagatagatcttgcaataacaaaaaatttctaatattatgttata
taaatttgatttatagaaaattactaatatgtctattt
gaattctttatctgtaaacataaccacatcaatattgtgtattgacgcac
tcaaaagataagtccatgattctgaaacagattcatgcatcttaaaggta
ctctctctaaagaatgacttttgttcaatgtgggtttttttccccacaca
atcagtgataaatggttaatcaacattgcaaaatgacgttcaactgtaga
aatgtaaaccatgttctaagactgacatcatttactgaaggacaattaga
tttcttccgacctttagaaattatgaaagagttttaaatgctgacattca
ggttttgatgttgttgtagttttattttttttctttttaaatagaagatc
atgatgttttgaaattaagcatggctattttatacatataaagaccatca
gagttttttaatttatattattttaaaaatctaccgtgcttttagttgtg
caatggatgcataaagttttaatagcgcttgttgttaattataaaactaa
tacaactttgtcaatactttctgactcttaggaagatatgcaaaagaagt
aaggggtagtgctagatagatacctatgagcaacctcttgttggttaaca
tcatgtagtttataaatgtcaatcatgtttatcaatatcatgctcatact
tcacaatagacatgctactctaaacccagattggtttattgttctcagtt
ttcagaaactgcacctggatttttaacgccatttaaaagaacataatgct
gtaattacatacggcatgaattacaagtatccccaaaccaatgaataatg
tagcagtgcacactaaaatgatggttcaatgcttatttgaatgttgatgg
ctgaaaatatctctctatgcactcttcatctactagacaataaaataact
gttatttgacttttaaaagacactttggtgtgtttatgaattactaacta
gccagattcatttcagattagtttatacagaagaaactggaagaaaagaa
aaaggatgggaatatgtttatcagcttcttcaacttctatgctaaaaggt
gatcttctatgctacaataaggatcgtattctgatgtactatcaaaaaaa
tgatctttttattctttggtttggctgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_148750265_148751415
seq2: B6Ng01-044K08.b_44_1181 (reverse)

seq1  AAATAGACATATATTAAGTAATTTTTCTATAAATTCAAATTTTATTATAA  50
      |||||||||||   | ||||| ||||||||||| ||||||||   |||||
seq2  AAATAGACATA---TTAGTAA-TTTTCTATAAA-TCAAATTT--ATATAA  43

seq1  CATAATTATTAGAAAATATTTTGTTATTGCAAAGATCTATTCTAGATAT-  99
      ||||| |||||| |||| |||||||||||| |||||||| ||||||||| 
seq2  CATAA-TATTAG-AAATTTTTTGTTATTGC-AAGATCTA-TCTAGATATA  89

seq1  AGCTTATAAACTTTCTTTACCATATAACAAAATAAACTATCAGGACCAAA  149
      ||||||||||| ||||||||||||||||||||||||||||||||||| ||
seq2  AGCTTATAAAC-TTCTTTACCATATAACAAAATAAACTATCAGGACCCAA  138

seq1  TTTTTTAAAGTCATAGGTCATCTTTTCTAAGAACACATAAAGAGACATTC  199
       ||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ATTTTTAAAGTCATAGGTCATC-TTTCTAAGAACACATAAAGAGACATTC  187

seq1  ATGACACAAGCGTGAAATCTAAATAAAACAATGATTGCAATGATATAAGC  249
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ATGACACAAGCGTG-AATCTAAATAAAACAATGATTGCAATGATATAAGC  236

seq1  ATTCTGCACATATTCAGGACTCTTGGGATATATATTTTAAGTTTAAAAAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGCACATATTCAGGACTCTTGGGATATATATTTTAAGTTTAAAAAC  286

seq1  TAAGTCACTAGATACTAGAATATATATTAAGCTTGTTGGCAAAGCAAACC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCACTAGATACTAGAATATATATTAAGCTTGTTGGCAAAGCAAACC  336

seq1  ATGATGCCCAGTATCTAATACCTACCATGTTAATATTACAATAGAAATTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGCCCAGTATCTAATACCTACCATGTTAATATTACAATAGAAATTT  386

seq1  CACATAAGCAATATACATTCTTCAACTCTCCTGTGATAGCAAATAGTGTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAAGCAATATACATTCTTCAACTCTCCTGTGATAGCAAATAGTGTA  436

seq1  TTGGTAAAATCACTTGGCTGTAGACTGTCCTCTTCCCTAGATTTGGAGCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTAAAATCACTTGGCTGTAGACTGTCCTCTTCCCTAGATTTGGAGCA  486

seq1  GTTAGTTAAATTCTTTAAGATCACAGGCTGAGAAATTGAACAGATTCTTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTTAAATTCTTTAAGATCACAGGCTGAGAAATTGAACAGATTCTTC  536

seq1  TAGAACTAATTTAATAACTTTGATCTTAACCACTGATCTTTTTAAAAGTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACTAATTTAATAACTTTGATCTTAACCACTGATCTTTTTAAAAGTA  586

seq1  TATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTGACAAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTGACAAT  636

seq1  AAAACAAGGTAACAAAAAAATTAGATTAAACCAGATAATGTTGTAAAACA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAGGTAACAAAAAAATTAGATTAAACCAGATAATGTTGTAAAACA  686

seq1  TTTGAACTCACAGCACTCCCGAAAATACAATAAACTTGCTTACCAGATAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAACTCACAGCACTCCCGAAAATACAATAAACTTGCTTACCAGATAT  736

seq1  AATCAATGGCCCACAGCATGTGCATACTCATCAATATGTTTACAATGACC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAATGGCCCACAGCATGTGCATACTCATCAATATGTTTACAATGACC  786

seq1  TTTACAAAATCATCATGGTTTCAGCTGATCTAAGATTCTGACACCCAGAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAAAATCATCATGGTTTCAGCTGATCTAAGATTCTGACACCCAGAA  836

seq1  ATTATCTCAGCGCCTTTCACAATTACTAATGGATTCTATAAGCACATTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTCAGCGCCTTTCACAATTACTAATGGATTCTATAAGCACATTTT  886

seq1  CCAATGTAACTAAAAATGTGCAATGGTTTTACATCTTTTACTGCATGGCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGTAACTAAAAATGTGCAATGGTTTTACATCTTTTACTGCATGGCT  936

seq1  GACTATGCCATGGACAGCATGAGGGAGAGAAGAAGAGAAGATATTATGAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTATGCCATGGACAGCATGAGGGAGAGAAGAAGAGAAGATATTATGAC  986

seq1  CATGGGTAAGAAAGTGCTCACCCACTTCCAGTAATGTGAATATAAAGTAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGTAAGAAAGTGCTCACCCACTTCCAGTAATGTGAATATAAAGTAA  1036

seq1  AAATCATATTGAATGGAATAAAATACAATTATCTCCAACTCTCTGGTAAG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATATTGAATGGAATAAAATACAATTATCTCCAACTCTCTGGTAAG  1086

seq1  TCTTTTGAATATCTTAATGGCATCTCTGAATGACAAAGAAAAGAATGAAT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGAATATCTTAATGGCATCTCTGAATGACAAAGAAAAGAATGAAT  1136

seq1  TC  1151
      ||
seq2  TC  1138

seq1: chr1_148696250_148697401
seq2: B6Ng01-044K08.g_68_1196

seq1  GAATTCTTTATCTGTAAACATAACCACATCAATATTGTGTATTGACGCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTATCTGTAAACATAACCACATCAATATTGTGTATTGACGCAC  50

seq1  TCAAAAGATAAGTCCATGATTCTGAAACAGATTCATGCATCTTAAAGGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAGATAAGTCCATGATTCTGAAACAGATTCATGCATCTTAAAGGTA  100

seq1  CTCTCTCTAAAGAATGACTTTTGTTCAATGTGGGTTTTTTTCCCCACACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTAAAGAATGACTTTTGTTCAATGTGGGTTTTTTTCCCCACACA  150

seq1  ATCAGTGATAAATGGTTAATCAACATTGCAAAATGACGTTCAACTGTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTGATAAATGGTTAATCAACATTGCAAAATGACGTTCAACTGTAGA  200

seq1  AATGTAAACCATGTTCTAAGACTGACATCATTTACTGAAGGACAATTAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAAACCATGTTCTAAGACTGACATCATTTACTGAAGGACAATTAGA  250

seq1  TTTCTTCCGACCTTTAGAAATTATGAAAGAGTTTTAAATGCTGACATTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCCGACCTTTAGAAATTATGAAAGAGTTTTAAATGCTGACATTCA  300

seq1  GGTTTTGATGTTGTTGTAGTTTTATTTTTTTTCTTTTTAAATAGAAGATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTGATGTTGTTGTAGTTTTATTTTTTTTCTTTTTAAATAGAAGATC  350

seq1  ATGATGTTTTGAAATTAAGCATGGCTATTTTATACATATAAAGACCATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGTTTTGAAATTAAGCATGGCTATTTTATACATATAAAGACCATCA  400

seq1  GAGTTTTTTAATTTATATTATTTTAAAAATCTACCGTGCTTTTAGTTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTTTTAATTTATATTATTTTAAAAATCTACCGTGCTTTTAGTTGTG  450

seq1  CAATGGATGCATAAAGTTTTAATAGCGCTTGTTGTTAATTATAAAACTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGATGCATAAAGTTTTAATAGCGCTTGTTGTTAATTATAAAACTAA  500

seq1  TACAACTTTGTCAATACTTTCTGACTCTTAGGAAGATATGCAAAAGAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACTTTGTCAATACTTTCTGACTCTTAGGAAGATATGCAAAAGAAGT  550

seq1  AAGGGGTAGTGCTAGATAGATACCTATGAGCAACCTCTTGTTGGTTAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGTAGTGCTAGATAGATACCTATGAGCAACCTCTTGTTGGTTAACA  600

seq1  TCATGTAGTTTATAAATGTCAATCATGTTTATCAATATCATGCTCATACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTAGTTTATAAATGTCAATCATGTTTATCAATATCATGCTCATACT  650

seq1  TCACAATAGACATGCTACTCTAAACCCAGATTGGTTTATTGTTCTCAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAATAGACATGCTACTCTAAACCCAGATTGGTTTATTGTTCTCAGTT  700

seq1  TTCAGAAACTGCACCTGGATTTTTAACGCCATTTAAAAGAACATAATGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAAACTGCACCTGGATTTTTAACGCCATTTAAAAGAACATAATGCT  750

seq1  GTAATTACATACGGCATGAATTACAAGTATCCCCAAACCAATGAATAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTACATACGGCATGAATTACAAGTATCCCCAAACCAATGAATAATG  800

seq1  TAGCAGTGCACACTAAAATGATGGTTCAATGCTTATTTGAATGTTGATGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGTGCACACTAAAATGATGGTTCAATGCTTATTTGAATGTTGATGG  850

seq1  CTGAAAATATCTCTCTATGCACTCTTCATCTACTAGACAATAAAATAACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAATATCTCTCTATGCACTCTTCATCTACTAGACAATAAAATAACT  900

seq1  GTTATTTGACTTTTAAAAAGACACTTTGGTGTTGTTTATGAATTACTAAC  950
      |||||||||||||| |||||||||||||||| ||||||||||||||||||
seq2  GTTATTTGACTTTT-AAAAGACACTTTGGTG-TGTTTATGAATTACTAAC  948

seq1  TAAGCCAGATTCATTTCAGAATTAGTTTATACAGAAGAAACTGGAAGAAA  1000
      | ||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  T-AGCCAGATTCATTTCAG-ATTAGTTTATACAGAAGAAACTGGAAGAAA  996

seq1  AGAAAAAAGAAGGGGAAATATTGTTTATCAGCCTTCTTCCACCTCTATGC  1050
      ||||||| || |||  |||| |||||||||| ||||||| || |||||||
seq2  AGAAAAAGGATGGG--AATA-TGTTTATCAG-CTTCTTCAACTTCTATGC  1042

seq1  CTAAAAAGGTGAATCCTTCTATGCTTACAATAAAGGAATCGTATTCTGGA  1100
         |||||||||   ||||||||| ||||||||  | |||||||||||  
seq2  --TAAAAGGTGA--TCTTCTATGC-TACAATAA--GGATCGTATTCTG--  1083

seq1  AGTGTAACTATCAAAAAAAATTGAATCTTTTTATTCTTGTGTTTTGGCTG  1150
        ||| |||||||||||||  || |||||||||||||| || ||||||||
seq2  -ATGT-ACTATCAAAAAAA--TG-ATCTTTTTATTCTT-TGGTTTGGCTG  1127

seq1  GA  1152
      ||
seq2  GA  1129