BAC Information

Click to search

BAC

Clone NameB6Ng01-044M07
Chromosome1 (Build37)
Map Location 37,406,373 - 37,546,553
singlet/doubletdoublet
Overlap geneInpp4a, 6330578E17Rik, Unc50, Mgat4a
Upstream gene4632411B12Rik, 4930533C12Rik, Lman2l, Cnnm4, Cnnm3, Ankrd23, Ankrd39, Sema4c, 1700024G10Rik, BC050210, EG623414, Cox5b, Actr1b, 4933424G06Rik, Zap70, Tmem131, EG241053, A230074B11Rik, 4921511C04Rik, Cnga3
Downstream gene2010300C02Rik, Tsga10, EG623661, Mitd1, Mrpl30, Gm776, 2300002O18Rik, Txndc9, EG666434, Eif5b, Rev1, EG329123, Aff3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044M07.bB6Ng01-044M07.g
ACCDH870430DH870431
length1,147505
definitionDH870430|Mus musculus domesticus DNA, BAC clone: B6Ng01-044M07, 5' end.DH870431|Mus musculus domesticus DNA, BAC clone: B6Ng01-044M07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,406,373 - 37,407,518)(37,546,043 - 37,546,553)
sequence
gaattcaggtgagtctctctaaccaccttccaaccctggcaaaaacttgc
ctaagcctaagctcatggttagtatgggaattccagcggctaccatttgt
tcccagcccccccctagccaggctccctctgaggctggggaatttcccat
cccctaagagagctgggagaatccatacagccagcatctgggggatgggt
agcactggagagctaaaggttggggattgccatgtgtactgtcatgtggg
tagctcatctgcagagggagctgagaaagtcatctgtactgctggcatta
gcgcacacatgctcctgctccagtgttctgtcagcctactagctatgaca
gatgtgccctctgctgaagttcgtccatgttgggcctccttcctgcagtg
cggcgttctggctttagctagtagttttctcttatcattaggaatacagt
cttactatggacagtcctcatggaaacttcaaaccatgggaagtaccaaa
ccttagatatcttggtttctcctagacacatatattcatgataaaatttg
actttcataattcaggcaaagaaagaaacaataaccaataacaagacata
attgcagcttgtaatagacaatgactattacgtaggataagatttacatg
accacaaatgctgtggtaccatgcagtgggtctcaccattgacatggcta
ctgagtgctgaccggaaggtaacatagatattggggtggcagagagatga
gacaaggacatgaactgtcagggcaaggcaaggggcattgttggctcggg
gtgtgctaatgcccttagggggtgccccctcttgtactgctgctctagga
ggcagctgtggatttgccgcaccctaagggaaggagacgagaagcagagc
ttggggatagaggataccctggtgtctagaggtccagctctagacaggta
gaggtagaatctgttaccaagacaggctccttgctttgagttttgttgaa
agaaaaaggaatggagcatctacctagcacaggagggatcaggctagctt
catgctctaagtcttctagcctgtgtctcctggaacccgagtgagaaatg
ctaccttctcaatggctggtttggccccctcaccctgaatgtcctga
agtcatggaacgtataatggaacttgctgctcatacaaatacaaacatta
gtttttagaaagttaattcttcctatggcttataaacacatataccagag
ggttgttttgtatgtgttgttgaatcctgaaccttttttcacaccaaggg
ggcggggactttaaatgattaaaggtaccagtgtcattttttttttcttt
ctggcttccaaatattctgcacttttttttgttgttgttgttttcgagat
attctgcagtcttgtttcagagtcatttttgttttcaatctatgatccat
gggtaagtttttgagttcctgcagcgatcagcagtaacattaaatgttca
tgcaaatgaagggctgtgtagctggactgccgtacaactgactggacact
attttctaaatgaagctccgtgtccagacacattaaaatattcctgtgtg
gaaacatggggttgacggtgaggccagctgtggtagttggggttgggtgg
gagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_37406373_37407518
seq2: B6Ng01-044M07.b_43_1189

seq1  GAATTCAGGTGAGTCTCTCTAACCACCTTCCAACCCTGGCAAAAACTTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTGAGTCTCTCTAACCACCTTCCAACCCTGGCAAAAACTTGC  50

seq1  CTAAGCCTAAGCTCATGGTTAGTATGGGAATTCCAGCGGCTACCATTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCCTAAGCTCATGGTTAGTATGGGAATTCCAGCGGCTACCATTTGT  100

seq1  TCCCAGCCCCCCCCTAGCCAGGCTCCCTCTGAGGCTGGGGAATTTCCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGCCCCCCCCTAGCCAGGCTCCCTCTGAGGCTGGGGAATTTCCCAT  150

seq1  CCCCTAAGAGAGCTGGGAGAATCCATACAGCCAGCATCTGGGGGATGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTAAGAGAGCTGGGAGAATCCATACAGCCAGCATCTGGGGGATGGGT  200

seq1  AGCACTGGAGAGCTAAAGGTTGGGGATTGCCATGTGTACTGTCATGTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTGGAGAGCTAAAGGTTGGGGATTGCCATGTGTACTGTCATGTGGG  250

seq1  TAGCTCATCTGCAGAGGGAGCTGAGAAAGTCATCTGTACTGCTGGCATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCATCTGCAGAGGGAGCTGAGAAAGTCATCTGTACTGCTGGCATTA  300

seq1  GCGCACACATGCTCCTGCTCCAGTGTTCTGTCAGCCTACTAGCTATGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCACACATGCTCCTGCTCCAGTGTTCTGTCAGCCTACTAGCTATGACA  350

seq1  GATGTGCCCTCTGCTGAAGTTCGTCCATGTTGGGCCTCCTTCCTGCAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGCCCTCTGCTGAAGTTCGTCCATGTTGGGCCTCCTTCCTGCAGTG  400

seq1  CGGCGTTCTGGCTTTAGCTAGTAGTTTTCTCTTATCATTAGGAATACAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCGTTCTGGCTTTAGCTAGTAGTTTTCTCTTATCATTAGGAATACAGT  450

seq1  CTTACTATGGACAGTCCTCATGGAAACTTCAAACCATGGGAAGTACCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTATGGACAGTCCTCATGGAAACTTCAAACCATGGGAAGTACCAAA  500

seq1  CCTTAGATATCTTGGTTTCTCCTAGACACATATATTCATGATAAAATTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGATATCTTGGTTTCTCCTAGACACATATATTCATGATAAAATTTG  550

seq1  ACTTTCATAATTCAGGCAAAGAAAGAAACAATAACCAATAACAAGACATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCATAATTCAGGCAAAGAAAGAAACAATAACCAATAACAAGACATA  600

seq1  ATTGCAGCTTGTAATAGACAATGACTATTACGTAGGATAAGATTTACATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCAGCTTGTAATAGACAATGACTATTACGTAGGATAAGATTTACATG  650

seq1  ACCACAAATGCTGTGGTACCATGCAGTGGGTCTCACCATTGACATGGCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAAATGCTGTGGTACCATGCAGTGGGTCTCACCATTGACATGGCTA  700

seq1  CTGAGTGCTGACCGGAAGGTAACATAGATATTGGGGTGGCAGAGAGATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTGCTGACCGGAAGGTAACATAGATATTGGGGTGGCAGAGAGATGA  750

seq1  GACAAGGACATGAACTGTCAGGGCAAGGCAAGGGGCATTGTTGGCTCGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGGACATGAACTGTCAGGGCAAGGCAAGGGGCATTGTTGGCTCGGG  800

seq1  GTGTGCTAATGCCCTTAGGGGGTGCCCCCTCTTGTACTGCTGCTCTAGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCTAATGCCCTTAGGGGGTGCCCCCTCTTGTACTGCTGCTCTAGGA  850

seq1  GGCAGCTGTGGATTTGCCGCACCCTAGGGGAAGGAGACGAGAAGCAGAGC  900
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GGCAGCTGTGGATTTGCCGCACCCTAAGGGAAGGAGACGAGAAGCAGAGC  900

seq1  TT-GGGATAGAGGATACCCTGGTGTCTAGAGGTCCAGCTCTAGACAGGTA  949
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGATAGAGGATACCCTGGTGTCTAGAGGTCCAGCTCTAGACAGGTA  950

seq1  GAGGTAGAATCTGTTACCAAGACAGGCTCCTTGCTTTGAGTTTTGTTGAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTAGAATCTGTTACCAAGACAGGCTCCTTGCTTTGAGTTTTGTTGAA  1000

seq1  AGAAAAAGGAAGGGAGCATCCTACCTAGCCACA-GAGGGATCAGGCTAGC  1048
      ||||||||||| ||||||| |||||||| |||| ||||||||||||||||
seq2  AGAAAAAGGAATGGAGCAT-CTACCTAG-CACAGGAGGGATCAGGCTAGC  1048

seq1  TTCATGCTCTAAAGTCTTCTAG-CTGTGTCTCCTGGAACCCGAGTGAGAA  1097
      |||||||||| ||||||||||| ||||||||||||||||||||||||| |
seq2  TTCATGCTCT-AAGTCTTCTAGCCTGTGTCTCCTGGAACCCGAGTGAG-A  1096

seq1  AATGCTACCTTTCTCATTGGCTGGTT--GGCCCCTCACTCAG-ATGTCCT  1144
      ||||||||| |||||| |||||||||  | |||||||| | | |||||||
seq2  AATGCTACC-TTCTCAATGGCTGGTTTGGCCCCCTCACCCTGAATGTCCT  1145

seq1  GA  1146
      ||
seq2  GA  1147

seq1: chr1_37546043_37546553
seq2: B6Ng01-044M07.g_70_580 (reverse)

seq1  TCCTCCCACCCAACCCCAACTACCACAGCTGGCCTCACCGTCAACCCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCCACCCAACCCCAACTACCACAGCTGGCCTCACCGTCAACCCCAT  50

seq1  GTTTCCACACAGGAATATTTTAATGTGTCTGGACACGGAGCTTCATTTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCACACAGGAATATTTTAATGTGTCTGGACACGGAGCTTCATTTAG  100

seq1  AAAATAGTGTCCAGTCAGTTGTACGGCAGTCCAGCTACACAGCCCTTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGTGTCCAGTCAGTTGTACGGCAGTCCAGCTACACAGCCCTTCAT  150

seq1  TTGCATGAACATTTAATGTTACTGCTGATCGCTGCAGGAACTCAAAAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATGAACATTTAATGTTACTGCTGATCGCTGCAGGAACTCAAAAACT  200

seq1  TACCCATGGATCATAGATTGAAAACAAAAATGACTCTGAAACAAGACTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCATGGATCATAGATTGAAAACAAAAATGACTCTGAAACAAGACTGC  250

seq1  AGAATATCTCGAAAACAACAACAACAAAAAAAAGTGCAGAATATTTGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATCTCGAAAACAACAACAACAAAAAAAAGTGCAGAATATTTGGAA  300

seq1  GCCAGAAAGAAAAAAAAAATGACACTGGTACCTTTAATCATTTAAAGTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAAAGAAAAAAAAAATGACACTGGTACCTTTAATCATTTAAAGTCC  350

seq1  CCGCCCCCTTGGTGTGAAAAAAGGTTCAGGATTCAACAACACATACAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCCCCCTTGGTGTGAAAAAAGGTTCAGGATTCAACAACACATACAAAA  400

seq1  CAACCCTCTGGTATATGTGTTTATAAGCCATAGGAAGAATTAACTTTCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCTCTGGTATATGTGTTTATAAGCCATAGGAAGAATTAACTTTCTA  450

seq1  AAAACTAATGTTTGTATTTGTATGAGCAGCAAGTTCCATTATACGTTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTAATGTTTGTATTTGTATGAGCAGCAAGTTCCATTATACGTTCCA  500

seq1  TGACTGAATTC  511
      |||||||||||
seq2  TGACTGAATTC  511