BAC Information

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BAC

Clone NameB6Ng01-045H03
Chromosome1 (Build37)
Map Location 148,900,396 - 148,995,112
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC383571, B830045N13Rik, LOC100043240
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045H03.bB6Ng01-045H03.g
ACCDH870899DH870900
length1,0501,047
definitionDH870899|Mus musculus domesticus DNA, BAC clone: B6Ng01-045H03, 5' end.DH870900|Mus musculus domesticus DNA, BAC clone: B6Ng01-045H03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(148,994,051 - 148,995,112)(148,900,396 - 148,901,437)
sequence
gaattccctccagagtgattaaagttacatggcatgtgtgcattccagcc
agatcacatacacatacaagatctatggatatgatcacttgccagagcag
ccatgttgatggattaaaattcctctgcatatgcatgtataaactataaa
atattagattagaaatagcaatatttgaagactagaaattgtaaatattt
ttctttttaataatattacatgattccagattcaaatctgtgcaaccata
tgatgtttcacaactttctgtaactatagttccagggtaatcagatttcc
ttttctgaccttcatgggtaccagatacacatacacacacacacacaaga
acactggtacacagagatacatagagaaaaaacatacatataaaataatt
ttaaaatactcttttaaaaaagaaaaaaactatattttaattatacttcc
ctttccaaacttctcttccaggttgcccctgacttgcctacccatgaaaa
taattcattagcaactcaatgactgtaattactacattctgtaagtctac
cctatgatcaagttctctactatttttctttttttttctgtaatggataa
catatccatatatcatatatgttgtgatagttcatatttctgcatacaaa
tatttctatcaatgtttttcctgactataattttttctgtttcactctta
gtttgaatattataaaatcaacataatagtctgaatcatttaacagtact
ttttctcaattttagactttctaatagctatcagttgatagtcaaagcgc
aataaatatatgaggcagtgttatgaggtgtagtatatggtagctctagg
gcccagtgggaattacaaggcattaaaccttctggacagtgatgagaggt
acactacatactacatcatttagagatgtgaggagaaatgtcctggcact
gtgcagagactggatttcaattttttatgaatgacattacactaaagttg
ttttgctttgtctttgtcacccagacacacatacactgattttacttagc

gaattctgacctgtgcactacagttcagatgaaatgttgaatgttgtgtg
aagagctgacatttttaaatcttggatagtcttacagtttatgaatttcc
atgtgcatgtgtgctgtaaaggctggaaactgtgtggtattaatagaaga
cttacaaacagatgaaagtgaacctcacgtatgtagctctgaatattcta
acactaaagagttgaagcagaactatcagagttgaatggatcatatagac
agaaatagataaagattaagagtaccctatcttgaaaattaagttatgaa
attatattaaggtgaaaaatataagcttcctgtccatgctctagacatgt
cagatacaaagattactgaaagttgacatttgaatttggcaatgaagaat
cattggaaaatttgaaaagaatgttttttgaagatatatttgtagcagag
tgaaaatccatcatctcctatgcaaagtgtagaattaatataacatggaa
taagagagaaattttcagcacctgtaggaagacagtgtgtatgggtagat
gggttacagattggtagatttttaagagctttttattggctaatttttct
tagtaaaaaaaaaatcagcatacaaaaacagagatggaaaaattcttatt
ctgatcaacattgcttatggttttattagcaatttaactgttctccaagt
ttctgctattgtttctgctatcatttttcatttattctttcatgaaaatg
tcaggaagtctatgtacatttagatttagtgatggtaaatgaaaatgagc
atctatggcctgttgagatgggctcagaagttttggataactgctattct
ttcagaggttcttgaattaaattccttgtactaacatggcagctttgcaa
ttgtctttaaagagtctgatgccttctactgtttatgctggcatccaaac
aaagcactcaaatttataaaatacagtctactatttattaaactggagca
tcttttctttttggatactactgaaaggagctgcactttcttttcgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_148994051_148995112
seq2: B6Ng01-045H03.b_48_1097 (reverse)

seq1  GCTAAGTAAAATTCAGTGTATTGTGTGTTCTGGGTGACAAAGACAAAGCA  50
      ||||||||||| |||||||| |||||| ||||||||||||||||||||||
seq2  GCTAAGTAAAA-TCAGTGTA-TGTGTG-TCTGGGTGACAAAGACAAAGCA  47

seq1  AAACAACTTTTAGTGTAATGTCATTCAATAAAAAATTTTGAAATCCAGTT  100
      ||||||| |||||||||||||||||| ||||||||  ||||||||||| |
seq2  AAACAAC-TTTAGTGTAATGTCATTC-ATAAAAAA--TTGAAATCCAG-T  92

seq1  CTCTGCACAGTGCCAGGACATTTTCTCCTTCACATTCTCCTAAAATGATG  150
      |||||||||||||||||||| ||||||| ||||| ||||   ||||||||
seq2  CTCTGCACAGTGCCAGGACA-TTTCTCC-TCACA-TCTC--TAAATGATG  137

seq1  TAGTATGTAGTGTACCTCTCATCACTGTCCAGAAGGTTTAATGCCTTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATGTAGTGTACCTCTCATCACTGTCCAGAAGGTTTAATGCCTTGTA  187

seq1  ATTCCCACTGGGCCCTAGAGCTACCATATACTACACCTCATAACACTGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCACTGGGCCCTAGAGCTACCATATACTACACCTCATAACACTGCC  237

seq1  TCATATATTTATTGCGCTTTGACTATCAACTGATAGCTATTAGAAAGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATATTTATTGCGCTTTGACTATCAACTGATAGCTATTAGAAAGTCT  287

seq1  AAAATTGAGAAAAAGTACTGTTAAATGATTCAGACTATTATGTTGATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTGAGAAAAAGTACTGTTAAATGATTCAGACTATTATGTTGATTTT  337

seq1  ATAATATTCAAACTAAGAGTGAAACAGAAAAAATTATAGTCAGGAAAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATTCAAACTAAGAGTGAAACAGAAAAAATTATAGTCAGGAAAAAC  387

seq1  ATTGATAGAAATATTTGTATGCAGAAATATGAACTATCACAACATATATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATAGAAATATTTGTATGCAGAAATATGAACTATCACAACATATATG  437

seq1  ATATATGGATATGTTATCCATTACAGAAAAAAAAAGAAAAATAGTAGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGGATATGTTATCCATTACAGAAAAAAAAAGAAAAATAGTAGAGA  487

seq1  ACTTGATCATAGGGTAGACTTACAGAATGTAGTAATTACAGTCATTGAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGATCATAGGGTAGACTTACAGAATGTAGTAATTACAGTCATTGAGT  537

seq1  TGCTAATGAATTATTTTCATGGGTAGGCAAGTCAGGGGCAACCTGGA--A  598
      |||||||||||||||||||||||||||||||||||||||||||||||  |
seq2  TGCTAATGAATTATTTTCATGGGTAGGCAAGTCAGGGGCAACCTGGAAGA  587

seq1  GAAGTTGTGGAAAGGGAAGTATAATTAAAATATAGTTTTTTTCTTTTTTA  648
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTT-TGGAAAGGGAAGTATAATTAAAATATAGTTTTTTTCTTTTTTA  636

seq1  AAAGAGTATTTTAAAATTATTTTATATGTATGTTTTTTCTCTATGTATCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTATTTTAAAATTATTTTATATGTATGTTTTTTCTCTATGTATCT  686

seq1  CTGTGTACCAGTGTTCTTGTGTGTGTGTGTGTATGTGTATCTGGTACCCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTACCAGTGTTCTTGTGTGTGTGTGTGTATGTGTATCTGGTACCCA  736

seq1  TGAAGGTCAGAAAAGGAAATCTGATTACCCTGGAACTATAGTTACAGAAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGTCAGAAAAGGAAATCTGATTACCCTGGAACTATAGTTACAGAAA  786

seq1  GTTGTGAAACATCATATGGTTGCACAGATTTGAATCTGGAATCATGTAAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGAAACATCATATGGTTGCACAGATTTGAATCTGGAATCATGTAAT  836

seq1  ATTATTAAAAAGAAAAATATTTACAATTTCTAGTCTTCAAATATTGCTAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTAAAAAGAAAAATATTTACAATTTCTAGTCTTCAAATATTGCTAT  886

seq1  TTCTAATCTAATATTTTATAGTTTATACATGCATATGCAGAGGAATTTTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAATCTAATATTTTATAGTTTATACATGCATATGCAGAGGAATTTTA  936

seq1  ATCCATCAACATGGCTGCTCTGGCAAGTGATCATATCCATAGATCTTGTA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATCAACATGGCTGCTCTGGCAAGTGATCATATCCATAGATCTTGTA  986

seq1  TGTGTATGTGATCTGGCTGGAATGCACACATGCCATGTAACTTTAATCAC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATGTGATCTGGCTGGAATGCACACATGCCATGTAACTTTAATCAC  1036

seq1  TCTGGAGGGAATTC  1062
      ||||||||||||||
seq2  TCTGGAGGGAATTC  1050

seq1: chr1_148900396_148901437
seq2: B6Ng01-045H03.g_68_1114

seq1  GAATTCTGACCTGTGCACTACAGTTCAGATGAAATGTTGAATGTTGTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGACCTGTGCACTACAGTTCAGATGAAATGTTGAATGTTGTGTG  50

seq1  AAGAGCTGACATTTTTAAATCTTGGATAGTCTTACAGTTTATGAATTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCTGACATTTTTAAATCTTGGATAGTCTTACAGTTTATGAATTTCC  100

seq1  ATGTGCATGTGTGCTGTAAAGGCTGGAAACTGTGTGGTATTAATAGAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCATGTGTGCTGTAAAGGCTGGAAACTGTGTGGTATTAATAGAAGA  150

seq1  CTTACAAACAGATGAAAGTGAACCTCACGTATGTAGCTCTGAATATTCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAAACAGATGAAAGTGAACCTCACGTATGTAGCTCTGAATATTCTA  200

seq1  ACACTAAAGAGTTGAAGCAGAACTATCAGAGTTGAATGGATCATATAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTAAAGAGTTGAAGCAGAACTATCAGAGTTGAATGGATCATATAGAC  250

seq1  AGAAATAGATAAAGATTAAGAGTACCCTATCTTGAAAATTAAGTTATGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATAGATAAAGATTAAGAGTACCCTATCTTGAAAATTAAGTTATGAA  300

seq1  ATTATATTAAGGTGAAAAATATAAGCTTCCTGTCCATGCTCTAGACATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATTAAGGTGAAAAATATAAGCTTCCTGTCCATGCTCTAGACATGT  350

seq1  CAGATACAAAGATTACTGAAAGTTGACATTTGAATTTGGCAATGAAGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATACAAAGATTACTGAAAGTTGACATTTGAATTTGGCAATGAAGAAT  400

seq1  CATTGGAAAATTTGAAAAGAATGTTTTTTGAAGATATATTTGTAGCAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGAAAATTTGAAAAGAATGTTTTTTGAAGATATATTTGTAGCAGAG  450

seq1  TGAAAATCCATCATCTCCTATGCAAAGTGTAGAATTAATATAACATGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATCCATCATCTCCTATGCAAAGTGTAGAATTAATATAACATGGAA  500

seq1  TAAGAGAGAAATTTTCAGCACCTGTAGGAAGACAGTGTGTATGGGTAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGAGAAATTTTCAGCACCTGTAGGAAGACAGTGTGTATGGGTAGAT  550

seq1  GGGTTACAGATTGGTAGATTTTTAAGAGCTTTTTATTGGCTAATTTTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTACAGATTGGTAGATTTTTAAGAGCTTTTTATTGGCTAATTTTTCT  600

seq1  TAGTAAAAAAAAAATCAGCATACAAAAACAGAGATGGAAAAATTCTTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAAAAAAAAATCAGCATACAAAAACAGAGATGGAAAAATTCTTATT  650

seq1  CTGATCAACATTGCTTATGGTTTTATTAGCAATTTAACTGTTCTCCAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCAACATTGCTTATGGTTTTATTAGCAATTTAACTGTTCTCCAAGT  700

seq1  TTCTGCTATTGTTTCTGCTATCATTTTTCATTTATTCTTTCATGAAAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTATTGTTTCTGCTATCATTTTTCATTTATTCTTTCATGAAAATG  750

seq1  TCAGGAAGTCTATGTACATTTAGATTTAGTGATGGTAAATGAAAATGAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAAGTCTATGTACATTTAGATTTAGTGATGGTAAATGAAAATGAGC  800

seq1  ATCTATGGCCTGTTGAGAT-GGCTCAGAAGTTTT-GATAACTGCTATTCT  848
      ||||||||||||||||||| |||||||||||||| |||||||||||||||
seq2  ATCTATGGCCTGTTGAGATGGGCTCAGAAGTTTTGGATAACTGCTATTCT  850

seq1  TTCAGAGGTTC-TGAATTAAATTCCTTGTACTAACATGGCAGC-TTGCAA  896
      ||||||||||| ||||||||||||||||||||||||||||||| ||||||
seq2  TTCAGAGGTTCTTGAATTAAATTCCTTGTACTAACATGGCAGCTTTGCAA  900

seq1  TTGTCTTTAAGGAGATCTGATGCCTTCTACTG-TTATGCTGGCATCCAAA  945
      |||||||||| ||| ||||||||||||||||| |||||||||||||||||
seq2  TTGTCTTTAAAGAG-TCTGATGCCTTCTACTGTTTATGCTGGCATCCAAA  949

seq1  CAAAGCACTCAAATATATAAAATACAGTCTAACTATTTATTAGACT-GAG  994
      |||||||||||||| ||||||||||||||| ||||||||||| ||| |||
seq2  CAAAGCACTCAAATTTATAAAATACAGTCT-ACTATTTATTAAACTGGAG  998

seq1  CATCTATTCTTTTGGGATACTACTGAAGTGAGCTGCAC-TTCGTTTCGT  1042
      ||||| ||||||| |||||||||||||  ||||||||| ||| ||||||
seq2  CATCTTTTCTTTTTGGATACTACTGAAAGGAGCTGCACTTTCTTTTCGT  1047