BAC Information

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BAC

Clone NameB6Ng01-046B24
Chromosome1 (Build37)2 (Build37)
Map Location 128,547,824 - 128,548,549168,136,482 - 168,136,524
singlet/doubletsingletsinglet
Overlap geneE030049G20Rik
Upstream geneLypd1
Downstream geneLOC383559, Mgat5, LOC667090, Tmem163
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-046B24.bB6Ng01-046B24.g
ACCDH871385DH871386
length728469
definitionDH871385|Mus musculus domesticus DNA, BAC clone: B6Ng01-046B24, 5' end.DH871386|Mus musculus domesticus DNA, BAC clone: B6Ng01-046B24, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(128,547,824 - 128,548,549)(168,136,482 - 168,136,524)
sequence
gaattcatatcatgtcataaaggcagctactttgtatgaggagggaaaat
ccctgaccatgcaggttcctcaccatggtgtgtgtgtgtgtgtgtggggg
tcaccatgaaaaaaaaaacccacatcattctgctgctttttgtgctgatg
agtaacaggcccatgaagagcactgttgtgcaaagtcatacaaaaccaag
taatgaggtgagagatgtgtaagctcctggggtagagagagcaggtatag
agctaaagacaagtcagccagcggttcttcagatgcagagctctgtgagt
gaggcccaccaaggacagcagtcagtttgccaacctcgaacacacagcaa
gaagagctggcccaaggaagctcggcccacgcgagtaagtactttgccct
ctgctgtgttcgtctgagaaagtagaagtatgtctgagtataattactaa
gacagtttaatttgaccttcagtttctcagcaaagagcatcatggggtta
aaaatcacttgggaaatatgcattgacacttgtgttagacacatgtatga
gatttgcaaacagcacaagagtaaaactctaagaaaacaaataagacgag
acagagtaatgaaggagggctcgggaaggcaggtatatttcctttgggaa
cttattagcccttgatatgaaagtcatattccgtaaacatgccagacctc
gccaaggtgatggggaaggtggggttaa
cacctgcacaaccatgagctcacttatgaactcaaagcagctgtggttac
ctacacaagtcccacccatgatcaagccagtcaacatggaggggaggggt
ttacaaggtcccacccccagctgaggagctggtgattgctgagagaggga
agtttcctggtaggtcctccatgctccagtggatggccccacacccacaa
gtacatgggcagcacttcagatgtggtgagttataaaaatatatatttac
tagagaaagaattgaaagagttgaaggagcttgcagccccataggaggaa
caacaatatgaaccaaccagtagccccagagctcccagggactaaaccac
cagccaaagagtacacatggagggacccatggctccaggcccttggtcct
gagaaggctcagtgccccagtacagaggaatgccaggacagggaagcagg
agtgggtgggttggtgaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_128547824_128548549
seq2: B6Ng01-046B24.b_43_770 (reverse)

seq1  TTAA-CCCACCTTCCCCATCACCTTGGCGAGGTCTGGCATGTTTACGGAA  49
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCCCACCTTCCCCATCACCTTGGCGAGGTCTGGCATGTTTACGGAA  50

seq1  TATGACTTTCATATCAAGGGCTAATAAGTTCCCAAAGGAAATATACCTGC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACTTTCATATCAAGGGCTAATAAGTTCCCAAAGGAAATATACCTGC  100

seq1  CTTCCCGAGCCCTCCTTCATTACTCTGTCTCGTCTTATTTGTTTTCTTAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCGAGCCCTCCTTCATTACTCTGTCTCGTCTTATTTGTTTTCTTAG  150

seq1  AGTTTTACTCTTGTGCTGTTTGCAAATCTCATACATGTGTCTAACACAAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTACTCTTGTGCTGTTTGCAAATCTCATACATGTGTCTAACACAAG  200

seq1  TGTCAATGCATATTTCCCAAGTGATTTTTAACCCCATGATGCTCTTTGCT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAATGCATATTTCCCAAGTGATTTTTAACCCCATGATGCTCTTTGCT  250

seq1  GAGAAACTGAAGGTCAAATTAAACTGTCTTAGTAATTATACTCAGACATA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACTGAAGGTCAAATTAAACTGTCTTAGTAATTATACTCAGACATA  300

seq1  CTTCTACTTTCTCAGACGAACACAGCAGAGGGCAAAGTACTTACTCGCGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTACTTTCTCAGACGAACACAGCAGAGGGCAAAGTACTTACTCGCGT  350

seq1  GGGCCGAGCTTCCTTGGGCCAGCTCTTCTTGCTGTGTGTTCGAGGTTGGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCGAGCTTCCTTGGGCCAGCTCTTCTTGCTGTGTGTTCGAGGTTGGC  400

seq1  AAACTGACTGCTGTCCTTGGTGGGCCTCACTCACAGAGCTCTGCATCTGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGACTGCTGTCCTTGGTGGGCCTCACTCACAGAGCTCTGCATCTGA  450

seq1  AGAACCGCTGGCTGACTTGTCTTTAGCTCTATACCTGCTCTCTCTACCCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCGCTGGCTGACTTGTCTTTAGCTCTATACCTGCTCTCTCTACCCC  500

seq1  AGGAGCTTACACATCTCTCACCTCATTACTTGGTTTTGTATGACTTTGCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCTTACACATCTCTCACCTCATTACTTGGTTTTGTATGACTTTGCA  550

seq1  CAACAGTGCTCTTCATGGGCCTGTTACTCATCAGCACAAAAAGCAGCAGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGTGCTCTTCATGGGCCTGTTACTCATCAGCACAAAAAGCAGCAGA  600

seq1  ATGATGTGGGTTTTTTTTTTCATGGTGACCCCCACACACACACACACACA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGTGGGTTTTTTTTTTCATGGTGACCCCCACACACACACACACACA  650

seq1  CCATGGTGAGGAACCTGCATGGTCAGGGATTTTCCCTCCTCATAC-CAGT  698
      |||||||||||||||||||||||||||||||||||||||||||||  |||
seq2  CCATGGTGAGGAACCTGCATGGTCAGGGATTTTCCCTCCTCATACAAAGT  700

seq1  AGCTGCCTTTATGACATGATATGAATTC  726
      ||||||||||||||||||||||||||||
seq2  AGCTGCCTTTATGACATGATATGAATTC  728

seq1: chr2_168136482_168136524
seq2: B6Ng01-046B24.g_500_542 (reverse)

seq1  GTTCACCAACCCACCCACTCAAGCTTCCCTGTCCTGGAATTCC  43
      ||||||||||||||||||||  ||||||||||||||| |||||
seq2  GTTCACCAACCCACCCACTCCTGCTTCCCTGTCCTGGCATTCC  43