BAC Information

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BAC

Clone NameB6Ng01-046G07
Chromosome1 (Build37)
Map Location 73,070,864 - 73,209,958
singlet/doubletdoublet
Overlap gene1700027A15Rik
Upstream geneLOC667937, LOC100043255, Mreg, Pecr, Tmem169, Xrcc5, March4, Smarcal1, Ankar, Rpl37a, Igfbp2, Igfbp5, LOC672187, LOC100042860, Tnp1
Downstream genePinc, LOC672208, LOC100043291, Tns1, Rufy4, Il8rb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-046G07.bB6Ng01-046G07.g
ACCDH871572DH871573
length1,0221,164
definitionDH871572|Mus musculus domesticus DNA, BAC clone: B6Ng01-046G07, 5' end.DH871573|Mus musculus domesticus DNA, BAC clone: B6Ng01-046G07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,070,864 - 73,071,894)(73,208,780 - 73,209,958)
sequence
gaattcaatattttttcaagttcctgatcaagaactttctagaatcatgc
ttatctaaaatgccagacttgtgcttgaaaggcccaccgggggttttact
tggttgcaatcattcatataaagttcctatgtgaacactgatgagaggac
tcaaaagtatttgcttgactttagtgaaatatcccccttcttccccagtc
acccaagcaagctctcacgctggctctcagcctttgtgacaatgtgtctt
cagtcatcaggccctctctaggagagtccgtgtcacagactcttataaag
ggaggatggctggactgatgtggactgatggacttggggtgagggagagg
gatgacggggagaacagccagaggatattatttcaaccagaacctcactg
ctgaccagagtttggaaccttgagaagatggcgaaagcctgtacgtgttg
gtgtccaacatgttacatgaagggtttcccacagagacacaaagcaaaga
aaacacctaagagaaggaacaaaaggtacgatgatgctttctgattacaa
aggggactctcaaaacagagtaattaccatcttagccttggctaattttt
ctaaaataggacacttttatctaaagtaggcatgtccaaactctgcatga
tagctctgaatgtgcccaaacacatttgttgacaaatgcatcagaatgtc
aaaaggttagacatcctcacaagcttagagcataaagtataactcatcat
cacggcttccaaaagtccaccttagctgatttttctatgtgcttctctac
ttccccaaactacacagagaaccagatgtctgtgttcactgtcgttgtgc
tgtaaagtctctctctgctcttgtccactcagtaggagacactgtcactg
gccttacctctgagtggcactctgatactttgagccttgccttggatggc
gttttcagtacagagttagtaagtcctttgaagacgttcagtgtccttga
cgcttcctcctttgtttcctca
gaattccaggaaggaaggagccaggaagaaatgccagtgaatggaaagaa
cacagctgtctccactgtgtgcacaggaggtgagctggcaaggagaagga
attgagcactgggtgtatatcttgtacttactgggtaagctctattgact
acctatgccttttcagagcaatccctactatacacagctatctatcgatt
aaaaatacacaaaacatcgttatcctccatcctacagggagattgccttg
tgtgatgaaggaaattcaattctgccatggaaattcttgatctctcccgc
tggcttccacttctcctatttaattttctggttcggcgaccatccatgta
tccattgcaatatgacagtgaatgtcatatgctcctcacttcttagacag
gggaacaaaatctcctagagactgagaaatgagccccaaatgtcaaaact
gctgagcatgagcgttttgatgggaggtgattgataccttcgatgcagca
ctctggcttcttccactaaccttagcagccttgggttcttcctcttcagt
aaccaacagtgagattgtgttccagaaatgtataggactattagttcttc
cccaaagtcattccaaaaacagttgaaataggaaaatggagggctgcctg
gccatgtctgaattttaaaagctaaacttcacttgaagtgtacgagttct
caaaagaaaactctagaagtctgctctgaagggacttagcccctttgttg
gtatttttctgggaagctggtaatgaacccataaatgctaatgaggaatg
tgctgtagctcccccagcagggctgagtcaaaccagcctccttagaggac
agaattccagggcttggaatgacagcactcactcggcacactgggctggg
cacagcatcagaagggtactgtctgctttgtcagcacagcttgcaccctt
tctctcagcttctctgactagattattttcccaggagatagtttcaaggc
ttcttttaaagtcagctgggagcctttggctttcttagcttatcagttgc
tatgtgctggagtaccaagacatattgtggcaggactgcccagaactggt
gagaagtgagctctccaaaaatcttcttggccatcacctaataccttctt
cttatgatctgaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_73070864_73071894
seq2: B6Ng01-046G07.b_43_1064

seq1  GAATTCAATATTTTTTCAAGTTCCTGATCAAGAACTTTCTAGAATCATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATATTTTTTCAAGTTCCTGATCAAGAACTTTCTAGAATCATGC  50

seq1  TTATCTAAAATGCCAGACTTGTGCTTGAAAGGCCCACCGGGGGTTTTACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTAAAATGCCAGACTTGTGCTTGAAAGGCCCACCGGGGGTTTTACT  100

seq1  TGGTTGCAATCATTCATATAAAGTTCCTATGTGAACACTGATGAGAGGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGCAATCATTCATATAAAGTTCCTATGTGAACACTGATGAGAGGAC  150

seq1  TCAAAAGTATTTGCTTGACTTTAGTGAAATATCCCCCTTCTTCCCCAGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAGTATTTGCTTGACTTTAGTGAAATATCCCCCTTCTTCCCCAGTC  200

seq1  ACCCAAGCAAGCTCTCACGCTGGCTCTCAGCCTTTGTGACAATGTGTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAGCAAGCTCTCACGCTGGCTCTCAGCCTTTGTGACAATGTGTCTT  250

seq1  CAGTCATCAGGCCCTCTCTAGGAGAGTCCGTGTCACAGACTCTTATAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCATCAGGCCCTCTCTAGGAGAGTCCGTGTCACAGACTCTTATAAAG  300

seq1  GGAGGATGGCTGGACTGATGTGGACTGATGGACTTGGGGTGAGGGAGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGATGGCTGGACTGATGTGGACTGATGGACTTGGGGTGAGGGAGAGG  350

seq1  GATGACGGGGAGAACAGCCAGAGGATATTATTTCAACCAGAACCTCACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACGGGGAGAACAGCCAGAGGATATTATTTCAACCAGAACCTCACTG  400

seq1  CTGACCAGAGTTTGGAACCTTGAGAAGATGGCGAAAGCCTGTACGTGTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCAGAGTTTGGAACCTTGAGAAGATGGCGAAAGCCTGTACGTGTTG  450

seq1  GTGTCCAACATGTTACATGAAGGGTTTCCCACAGAGACACAAAGCAAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCAACATGTTACATGAAGGGTTTCCCACAGAGACACAAAGCAAAGA  500

seq1  AAACACCTAAGAGAAGGAACAAAAGGTACGATGATGCTTTCTGATTACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACCTAAGAGAAGGAACAAAAGGTACGATGATGCTTTCTGATTACAA  550

seq1  AGGGGACTCTCAAAACAGAGTAATTACCATCTTAGCCTTGGCTAA-TTTT  599
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AGGGGACTCTCAAAACAGAGTAATTACCATCTTAGCCTTGGCTAATTTTT  600

seq1  CTAAAATAGGACACTTTTATCTAAAGTAGGCATGTCCAAACTCTGCATGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAATAGGACACTTTTATCTAAAGTAGGCATGTCCAAACTCTGCATGA  650

seq1  TAGCTCTGAATGTGCCCAAACACATTTGTTGACAAATGCATCAGAATGTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCTGAATGTGCCCAAACACATTTGTTGACAAATGCATCAGAATGTC  700

seq1  AAAAGGTTAGACATCCTCACAAGCTTAGAGCATAAAGTATAACTCATCAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGTTAGACATCCTCACAAGCTTAGAGCATAAAGTATAACTCATCAT  750

seq1  CACGGCTTCCAAAAGTCCACCTTAGCTGATTTTTCTATGTGCTTCTCTAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGCTTCCAAAAGTCCACCTTAGCTGATTTTTCTATGTGCTTCTCTAC  800

seq1  TTCCCCAAACTACACAGAGAACCAGATGTCTGTGTTCACTGTCGTTGTGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCAAACTACACAGAGAACCAGATGTCTGTGTTCACTGTCGTTGTGC  850

seq1  TGTAAAGTCTCTCTCTGCTCTTGTCCACTCAGTAGGAGACACTGTCACTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAGTCTCTCTCTGCTCTTGTCCACTCAGTAGGAGACACTGTCACTG  900

seq1  GCCTTACCTCTGAAGGTGGGCACTCAGATACTTTGAGCCCTTGCCTTGGA  949
      |||||||||||||  || ||||||| ||||||||||| ||||||||||||
seq2  GCCTTACCTCTGA--GT-GGCACTCTGATACTTTGAG-CCTTGCCTTGGA  946

seq1  TGGCGTTTTCAGGTAACAGAGTTAGTAAGGTCCCTTTGAAGAACGTTCCA  999
      ||||||||||||   ||||||||||||||   ||||||||| ||||| ||
seq2  TGGCGTTTTCAG--TACAGAGTTAGTAAG--TCCTTTGAAG-ACGTT-CA  990

seq1  GTGTCCCTGACAGCTCCTCCTTTGTCTCCTCA  1031
      |||||| ||||   ||||||||||| ||||||
seq2  GTGTCCTTGACGCTTCCTCCTTTGTTTCCTCA  1022

seq1: chr1_73208780_73209958
seq2: B6Ng01-046G07.g_67_1230 (reverse)

seq1  CTTCAGATCCATAGGATGAAGGCTACTAGGTGATGGACCAAGAAGGAGTC  50
      |||||||| |||| || ||||| || |||||||||| ||||||||   | 
seq2  CTTCAGAT-CATAAGAAGAAGG-TATTAGGTGATGG-CCAAGAAG--ATT  45

seq1  TATGGGGAG-TCACTTCTCA-CAGCTCTTGGCAGTCTTGGCACAATATTG  98
      | ||| ||| |||||||||| ||| ||| ||||||| || ||||||| ||
seq2  TTTGGAGAGCTCACTTCTCACCAGTTCTGGGCAGTCCTGCCACAATA-TG  94

seq1  TCTTGGTACT-CAGCACATAGCAACTGAATAAGCCTATGGAAAGCTAAAG  147
      |||||||||| |||||||||||||||| ||||||  |  |||||| ||||
seq2  TCTTGGTACTCCAGCACATAGCAACTG-ATAAGCTAA--GAAAGCCAAAG  141

seq1  GCTCCAGCCTGACTTTAAAAAGAAGCCTTTGAAACTATCCTCCTGGGAAA  197
      |||||   |||||||| |||||||||| |||||||||| |||||||||||
seq2  GCTCCCAGCTGACTTT-AAAAGAAGCC-TTGAAACTAT-CTCCTGGGAAA  188

seq1  ATAATCTAGGTCAGAGAGGCTGAGGAGGAAAGGGTGCAAGCTGTGCTGAC  247
      |||||||| |||||||| ||||||   |||||||||||||||||||||||
seq2  ATAATCTA-GTCAGAGAAGCTGAG--AGAAAGGGTGCAAGCTGTGCTGAC  235

seq1  AAAGCAGACAGTACCCTTCCTGATGCTGTGCCCAGCCCAGTGTGGCCGAG  297
      |||||||||||||||||| |||||||||||||||||||||||| ||||||
seq2  AAAGCAGACAGTACCCTT-CTGATGCTGTGCCCAGCCCAGTGT-GCCGAG  283

seq1  TGAGTGCTGTCATTCCAAGCCCTGGAATTCTGTCCTCTAAGGAGGCTGGT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGCTGTCATTCCAAGCCCTGGAATTCTGTCCTCTAAGGAGGCTGGT  333

seq1  TTGACTCAGCCCTGCTGGGGGAGCTACAGCACATTCCTCATTAGCATTTA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTCAGCCCTGCTGGGGGAGCTACAGCACATTCCTCATTAGCATTTA  383

seq1  TGGGTTCATTACCAGCTTCCCAGAAAAATACCAACAAAGGGGCTAAGTCC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTCATTACCAGCTTCCCAGAAAAATACCAACAAAGGGGCTAAGTCC  433

seq1  CTTCAGAGCAGACTTCTAGAGTTTTCTTTTGAGAACTCGTACACTTCAAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGAGCAGACTTCTAGAGTTTTCTTTTGAGAACTCGTACACTTCAAG  483

seq1  TGAAGTTTAGCTTTTAAAATTCAGACATGGCCAGGCAGCCCTCCATTTTC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTTTAGCTTTTAAAATTCAGACATGGCCAGGCAGCCCTCCATTTTC  533

seq1  CTATTTCAACTGTTTTTGGAATGACTTTGGGGAAGAACTAATAGTCCTAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTCAACTGTTTTTGGAATGACTTTGGGGAAGAACTAATAGTCCTAT  583

seq1  ACATTTCTGGAACACAATCTCACTGTTGGTTACTGAAGAGGAAGAACCCA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCTGGAACACAATCTCACTGTTGGTTACTGAAGAGGAAGAACCCA  633

seq1  AGGCTGCTAAGGTTAGTGGAAGAAGCCAGAGTGCTGCATCGAAGGTATCA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGCTAAGGTTAGTGGAAGAAGCCAGAGTGCTGCATCGAAGGTATCA  683

seq1  ATCACCTCCCATCAAAACGCTCATGCTCAGCAGTTTTGACATTTGGGGCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCTCCCATCAAAACGCTCATGCTCAGCAGTTTTGACATTTGGGGCT  733

seq1  CATTTCTCAGTCTCTAGGAGATTTTGTTCCCCTGTCTAAGAAGTGAGGAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTCAGTCTCTAGGAGATTTTGTTCCCCTGTCTAAGAAGTGAGGAG  783

seq1  CATATGACATTCACTGTCATATTGCAATGGATACATGGATGGTCGCCGAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGACATTCACTGTCATATTGCAATGGATACATGGATGGTCGCCGAA  833

seq1  CCAGAAAATTAAATAGGAGAAGTGGAAGCCAGCGGGAGAGATCAAGAATT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAAATTAAATAGGAGAAGTGGAAGCCAGCGGGAGAGATCAAGAATT  883

seq1  TCCATGGCAGAATTGAATTTCCTTCATCACACAAGGCAATCTCCCTGTAG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGGCAGAATTGAATTTCCTTCATCACACAAGGCAATCTCCCTGTAG  933

seq1  GATGGAGGATAACGATGTTTTGTGTATTTTTAATCGATAGATAGCTGTGT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAGGATAACGATGTTTTGTGTATTTTTAATCGATAGATAGCTGTGT  983

seq1  ATAGTAGGGATTGCTCTGAAAAGGCATAGGTAGTCAATAGAGCTTACCCA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTAGGGATTGCTCTGAAAAGGCATAGGTAGTCAATAGAGCTTACCCA  1033

seq1  GTAAGTACAAGATATACACCCAGTGCTCAATTCCTTCTCCTTGCCAGCTC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTACAAGATATACACCCAGTGCTCAATTCCTTCTCCTTGCCAGCTC  1083

seq1  ACCTCCTGTGCACACAGTGGAGAGAGCTGGTGTTCTTTCCATTCACTGGC  1147
      ||||||||||||||||||||||| |||| |||||||||||||||||||||
seq2  ACCTCCTGTGCACACAGTGGAGACAGCT-GTGTTCTTTCCATTCACTGGC  1132

seq1  ATTTCTTCCTGGCTACTTCCTTCCTGGAATTC  1179
      |||||||||||||| |||||||||||||||||
seq2  ATTTCTTCCTGGCTCCTTCCTTCCTGGAATTC  1164