BAC Information

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BAC

Clone NameB6Ng01-047B10
Chromosome1 (Build37)
Map Location 136,862,306 - 136,862,968
singlet/doubletsinglet
Overlap geneUbe2t
Upstream geneLOC100042358, Fmod, Btg2, EG667414, Chit1, Chi3l1, Mybph, Adora1, Myog, Ppfia4, LOC100042382, Tmem183a, 4933406M09Rik, Cyb5r1, Adipor1, Klhl12, Rabif, 4931440L10Rik, Jarid1b, LOC100042418, Syt2, Ppp1r12b
Downstream geneLgr6, Ptprv, LOC100042432, Ptpn7, Arl8a, Gpr37l1, LOC100043064, Elf3, Rnpep, Timm17a, Lmod1, Tmem58, Ipo9, Nav1, EG215714, LOC623327, Csrp1, Phlda3, Tnni1, Lad1, Tnnt2, LOC100042477, Pkp1, 9830123M21Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047B10.bB6Ng01-047B10.g
ACCDH872046DH872047
length1,149985
definitionDH872046|Mus musculus domesticus DNA, BAC clone: B6Ng01-047B10, 5' end.DH872047|Mus musculus domesticus DNA, BAC clone: B6Ng01-047B10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactctgtagaccaggctgacctcaaactcagaaattcgcctggc
tctgcctcccaagtgctgggattaaaggtgtgcaccaccatgcctggcca
agcccaactcttataaaaggaaaacatttcattggggctggtttacagtt
tcagaggttcagtccattatcctgatggcatcatcatgcaggcagactta
gtgctggaagagccgagaattctacatcttgatccgaaggcagcagtggg
agagtcttctgcaggtagccaagaggagactggaattccacactaggtgg
agcttaagcattggagacctcaaaacccactcccacagtgacacacttcc
ttcaacaaagccacaccacctaatagtgccatttcctgagagccaagcat
tcaaacacaagagcctgtggaggccaaagctattcataccactacagggt
gagatggttaatattgtcaactgaagtataggctatagaatcatctagga
gacagacttctgggcctgtctgtaaaggacatacctagattgacttagtt
aaggtgggaagagtaaccataaatataggtgggatcaaacagacagtggt
cccagactgagtaaaaagaaaaacgtggctgcctgactgaagcaggtgca
gggtgaccagctgcctcctagtcctgcagtcttgccagctccactaccct
ggactgtatccccggactatgagccaaaatagacactaccttttcttgag
tctcctgtgtcatggattttgttatagcaaggagaaaactgactaataca
gaggaacaccaccctgtggcccaggctgacctcagacttagagtaatcct
tcttcttcagtttgctttaagtacacaagttctcatacactactggcctc
aaactatatagtcatggatggcagtgtgttgctgatcttctgctcagctt
caatgatgagattatgtgtgtctgcccatgctcagcataatatgtgcata
tcacctagtgactgtttgctctgcagcctctctaccctcaatacatctag
tatgcagggtcttgctcatctaggcaaatgttcttccgctaagtatattc
cagccctgaactgaagaacaattacattaaaaatgaaataagctaggta
gaattcaaaagatggcatgagaccttctggaactgtcactgatcatagtt
acgaaccaccatgtgggggtcggtatctgaacgcagttcctttgaacagt
accaagtgctttggcagagccatctctccagccctactcgctatctatct
ttctatctatctatctttctatctatctatctatctatctatctatctat
ctatctatctatctatctatctatctatctatctatctatgtgagataga
ctctctcactgaacctggagcttacaagtttgactggactggctggccag
caggcccaaggaagccccttcttgtttctccaatgttggggctgcaggtt
catccggtttctttatgtcagtgttggggattctaactcggggcctcatc
tcagccattttcccagcccgttttgtaacttttagaaagagtctatctgt
agatagatagcccaagttgacctcaatccattatttaggctaaggtattc
ttaactgctgcctttccttccattgcctccaagtgctggcattacagatc
tgtatcaccatgcctgccacccccccaccaccaagctttaaactagcttt
gagatagttcactggtagtatctgcctagcatgtgtgagcatagctgcat
cttagcaccacaagaacaagagctctgagccttaagacatacacattgca
gaaggagtacatagcatagttgagagcttcgtaatttgcagtgagtacat
tgtgtacagcactcagagaacagacaccatcgtctctgtgagttctctgc
tccatgcctttctgtacatctctccactcagcagatgaggtcagtgttgc
ttagctatgaaggagtgtgagctgcatgtccagatgttgggatctgctga
ctgctgtctgctgctcatctcatgctgtatgtcagtgatgacacgcgtca
gatccggtacatatgatactgcagattctggacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_136862306_136862968
seq2: B6Ng01-047B10.b_550_1192

seq1  CTTCTGGGCCTGTCTGTAAAGGACATACCTAGATTGACTTAGTTAAGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGGGCCTGTCTGTAAAGGACATACCTAGATTGACTTAGTTAAGGTG  50

seq1  GGAAGAGTAACCATAAATATAGGTGGGATCAAACAGACAGTGGTCCCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAGTAACCATAAATATAGGTGGGATCAAACAGACAGTGGTCCCAGA  100

seq1  CTGAGTAAAAAGAAAAACGTGGCTGCCTGACTGAAGCAGGTGCAGGGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTAAAAAGAAAAACGTGGCTGCCTGACTGAAGCAGGTGCAGGGTGA  150

seq1  CCAGCTGCCTCCTAGTCCTGCAGTCTTGCCAGCTCCACTACCCTGGACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTGCCTCCTAGTCCTGCAGTCTTGCCAGCTCCACTACCCTGGACTG  200

seq1  TATCCCCGGACTATGAGCCAAAATAGACACTACCTTTTCTTGAGTCTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCCGGACTATGAGCCAAAATAGACACTACCTTTTCTTGAGTCTCCT  250

seq1  GTGTCATGGATTTTGTTATAGCAAGGAGAAAACTGACTAATACAGAGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCATGGATTTTGTTATAGCAAGGAGAAAACTGACTAATACAGAGGAA  300

seq1  CACCACCCTGTGGCCCAGGCTGACCTCAGACTTAGAGTAATCCTCCTCCT  350
      |||||||||||||||||||||||||||||||||||||||||||| || ||
seq2  CACCACCCTGTGGCCCAGGCTGACCTCAGACTTAGAGTAATCCTTCTTCT  350

seq1  TCAGTTTGCTTTAAGTACACAAGTTCTCATACACTACTGGCCTCAAACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTTGCTTTAAGTACACAAGTTCTCATACACTACTGGCCTCAAACTA  400

seq1  TATAGTCATGGATGGCAGTGTGTTGCTGATCTTCCTGCCTCAGCCTTCCA  450
      ||||||||||||||||||||||||||||||||| ||| ||||| ||||  
seq2  TATAGTCATGGATGGCAGTGTGTTGCTGATCTT-CTG-CTCAG-CTTC--  445

seq1  ATTGATGAGATTATTGTTGTGTCCTGCCCATGCCCAGCATAATATGTGCA  500
      | ||||||||||||   ||||| |||||||||| ||||||||||||||| 
seq2  AATGATGAGATTAT--GTGTGT-CTGCCCATGCTCAGCATAATATGTGC-  491

seq1  ATATCACCTAGTGACTGGTTTGCTCTGCAGCCCTCTCCTACCCCTCACAT  550
      |||||||||||||||| ||||||||||||| ||||| ||| |||||| ||
seq2  ATATCACCTAGTGACT-GTTTGCTCTGCAG-CCTCT-CTA-CCCTCA-AT  536

seq1  ACATCTAGTAGTGCAGGGTCTTGCTCATACTAGGCAAATGTTCTTCCGCT  600
      |||||||||| ||||||||||||||||| |||||||||||||||||||||
seq2  ACATCTAGTA-TGCAGGGTCTTGCTCAT-CTAGGCAAATGTTCTTCCGCT  584

seq1  AAGTTATATCCCCAGCCCCTGAACTGAAGACAATTTACATTAAAAATGAA  650
      ||| |||||  |||| ||||||||||||||  | ||||||||||||||||
seq2  AAG-TATAT-TCCAG-CCCTGAACTGAAGAACAATTACATTAAAAATGAA  631

seq1  ATAAGCTAAGGTA  663
      ||||||| |||||
seq2  ATAAGCT-AGGTA  643