BAC Information

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BAC

Clone NameB6Ng01-047H07
Chromosome1 (Build37)
Map Location 91,123,241 - 91,123,886
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040766, 6430706D22Rik, LOC100038822, Trpm8, Spp2, Glrp1, Arl4c, LOC100040127, 2410088K16Rik, LOC208347, Sh3bp4
Downstream geneLOC383542, EG665688, Centg2, Gbx2, Asb18, Iqca, Cxcr7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047H07.bB6Ng01-047H07.g
ACCDH872310DH872311
length9521,211
definitionDH872310|Mus musculus domesticus DNA, BAC clone: B6Ng01-047H07, 5' end.DH872311|Mus musculus domesticus DNA, BAC clone: B6Ng01-047H07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatatttctagaaaatatgaaatggcagtgataggaaatagatta
gcagttgcctagcagcaaaggtagactgtggggacaacatactcaaaagt
accaggggctgtcaaaacagtggaaattcttttttgttgtttcttgggtt
ttgttgttgtttttaatagtctcttgtatcccaggctggccttaatcctt
ttgcctccaccttccaggtactagaattagagatgcctgtcaccacacct
atagaagaattttaatccagaaacatggctactctggctagggatcatgc
ctaaagaccttctagttctacatgatctgggtggaatgcaggcacaccct
tagtacatacctttaatccctaacaatgaaggtaaatttagtttgtagaa
ggaagtagtgatatttgaaattgaccgctagttgaaggccagacaaagtg
atgaatcagagaaagctttgacagaatgagtcagagataggatgcgccca
actcataccataacagcacagttctactcaagaacaagtggtggtgtgtg
tgaacagcagttttacagagacaggttgcagagagaacaagctagatgaa
aacagattgagccagagaatgagaaggaatgagattagagcaattgctaa
agttagtatgaatccaggcagagcaattcagacagaagtggagagaagtc
agtttaaataagtcagtttggaagatgaaattgtatgtagactagaaact
tccagacctaggtctaggatagctaagacagagaaagaaatgctatgggc
tcagcccaaactgtgtgacggctcttgggtacggctctcatctcatccct
tcattagaggaagtaagatatttacaacacctggtgaagtatttctgttt
atgaagtgttggtgagtacgggactgattgctgttgtcacgggatctgta
ga
gaattcagaacttttcagctggggaacgagagtaccagtgagtacagctt
tacgaggtaagtctgatcttgaactttctaacgaaattcaagacagtcta
tcagaagtaaagtggaatatgtttggccttgaattttttctggtgttagg
agcccttttgttccttttcacatgttatcaagtggttaagatagggcgga
ttctagaggaaattcaggacaagctatcagaagtaaagcggggagagaga
gtaggaacaaagaggaaatatggtacacaaaataagtatacaggcctttc
caagggtcttgaacccgaggaaaagttaaggttaggtaggaatacctgga
gagagattagaagaaaaagaggaaaaagggaaaagaagaaagatcaatta
gcggaggtctctaggaaaaggagcctgtgctcatcgctggatgggctcgg
gaagccagctcttagtagctctgaagcaggtgaagaatcctcctctgagg
aaacagactgggaggaagaagcagcccattaccagccagctaattggtca
agaaaaaagccaaaagcggctggcgaaggccagtttgctgattggcctca
gggcagtcggcttcaaggtccgccctatgcggagtccccgccctgcgtag
tgcgtcagcaatgcgcagagaggcagtgcgcagagaggcagtgcgcagac
tcattcattcccagagaggaacaaaggaaaatacaacaggcatttccggt
ctttgaaggagccgagggtgggcgtgtccacgctccggtagaatacttac
aaattaaggaaattgccgagtcggttcgtaaatacggaaccaatgctaat
tttaccttggtgcagttagacaggctcgctggcatggcactaactcctgc
tgactggcaaacggtgtaaaagccgctctccctagtatgggcaaatatat
ggaatggagagcgctttggcacgaagctgcacagcgcagcccgagcaacg
cagctgctttgatccagagcagagagatgactttgactgtaacggtcagg
agctattctgctgatcaacaactacatggggagcttgcccagatctcccg
ctatagcctggaaggccttctcgagcagtgaaaccactggctagtacaag
attccatggaactcgctaatcttccgaatttggcgaagaccagcagagaa
cgacaatttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_91123241_91123886
seq2: B6Ng01-047H07.b_47_692 (reverse)

seq1  CAATTGCTCTAATCTCATTCCTTCTCATTCTCTGGCTCAATCTGTTTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGCTCTAATCTCATTCCTTCTCATTCTCTGGCTCAATCTGTTTTCA  50

seq1  TCTAGCTTGTTCTCTCTGCAACCTGTCTCTGTAAAACTGCTGTTCACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCTTGTTCTCTCTGCAACCTGTCTCTGTAAAACTGCTGTTCACACA  100

seq1  CACCACCACTTGTTCTTGAGTAGAACTGTGCTGTTATGGTATGAGTTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACCACTTGTTCTTGAGTAGAACTGTGCTGTTATGGTATGAGTTGGG  150

seq1  CGCATCCTATCTCTGACTCATTCTGTCAAAGCTTTCTCTGATTCATCACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCATCCTATCTCTGACTCATTCTGTCAAAGCTTTCTCTGATTCATCACT  200

seq1  TTGTCTGGCCTTCAACTAGCGGTCAATTTCAAATATCACTACTTCCTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTGGCCTTCAACTAGCGGTCAATTTCAAATATCACTACTTCCTTCT  250

seq1  ACAAACTAAATTTACCTTCATTGTTAGGGATTAAAGGTATGTACTAAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACTAAATTTACCTTCATTGTTAGGGATTAAAGGTATGTACTAAGGG  300

seq1  TGTGCCTGCATTCCACCCAGATCATGTAGAACTAGAAGGTCTTTAGGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCTGCATTCCACCCAGATCATGTAGAACTAGAAGGTCTTTAGGCAT  350

seq1  GATCCCTAGCCAGAGTAGCCATGTTTCTGGATTAAAATTCTTCTATAGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCCTAGCCAGAGTAGCCATGTTTCTGGATTAAAATTCTTCTATAGGT  400

seq1  GTGGTGACAGGCATCTCTAATTCTAGTACCTGGAAGGTGGAGGCAAAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGACAGGCATCTCTAATTCTAGTACCTGGAAGGTGGAGGCAAAAGG  450

seq1  ATTAAGGCCAGCCTGGGATACAAGAGACTATTAAAAACAACAACAAAACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGGCCAGCCTGGGATACAAGAGACTATTAAAAACAACAACAAAACC  500

seq1  CAAGAAACAACAAAAAAGAATTTCCACTGTTTTGACAGCCCCTGGTACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAACAACAAAAAAGAATTTCCACTGTTTTGACAGCCCCTGGTACTT  550

seq1  TTGAGTATGTTGTCCCCACAGTCTACCTTTGCTGCTAGGCAACTGCTAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTATGTTGTCCCCACAGTCTACCTTTGCTGCTAGGCAACTGCTAAT  600

seq1  CTATTTCCTATCACTGCCATTTCATATTTTCTAGAAATATGAATTC  646
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTCCTATCACTGCCATTTCATATTTTCTAGAAATATGAATTC  646