BAC Information

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BAC

Clone NameB6Ng01-047I24
Chromosome1 (Build37)
Map Location 63,522,751 - 63,523,781
singlet/doubletsinglet
Overlap geneAdam23
Upstream genePard3b, LOC667592, Nrp2, LOC100043070, A430093A21Rik, Ndufs1, Eef1b2, Gpr1, 1700039I01Rik, 4930431J08Rik, LOC667644, LOC100042638
Downstream geneGm215, Mdh1b, Fastkd2, 4933402D24Rik, LOC671842, OTTMUSG00000013918, Klf7, Ppia-ps1_583.1, LOC100043124
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047I24.bB6Ng01-047I24.g
ACCDH872390DH872391
length881777
definitionDH872390|Mus musculus domesticus DNA, BAC clone: B6Ng01-047I24, 5' end.DH872391|Mus musculus domesticus DNA, BAC clone: B6Ng01-047I24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaactggtaggcagcatataaaagaatgcaaattgatccattttt
atctccttgtacaaagctcaagtacaagtggatcaaggacctccacataa
atccaaatacactgactctaatagaagagaaagtgggaagtccttgaaca
cattggcacaggggaaatttttctgaatagaaagaacaccaatggctcac
tctctctaccttccatgattattttgttcccccttctaagtagggtttag
gcacattttggccttccttaacgtaaagcttcatatggcctgtgacttgt
attgtgggtattctgagcttttaggctaatatccccttatcagtgattac
ataccatgtgtgttcatttggatctgggttacctcactcaggattatatt
ttctagatccacccattcacctgcaaaattcatgaagtcattgtttttaa
tagctgagtagtattcccttgtgtaaatgtaccacagtttctgtatccat
tcctccgttgagggacatctgggttgtttctagtgtctgcctgttataaa
taaatcctgctatgaacatagtggagtacatgtccttattatatattgga
acatctttacggtatatgctttaatagtggtatagctgagtcttcaggta
gaactatttctcattttctgagggactcagcagatgttttccaagtgatt
gtacctcccaccagcaatggagactgatcttctccacatcctcaccagca
tctgctgtacctgagtttttatctagccattctgactgtgtgagtagaat
ctcaggtcattttgattgcattcctgatgactaaggatgttgaacattct
ttaggagctgcttggccattgagatgccaca
gaattcatgtaaagattatgcggttcgttttggctatatggatggtctac
tgcagttgagagagaccacactcgacaagacagatgtttcttggttttat
gtttagatgcaagaatctcagacaagcgtggtgaccttattctgtttggt
ttggattttgaaatggtggccgatggtgttagggtagcaagaaccactta
ttggtttgtatttgaaatttagtatgtgttaattgcctttaaaattctgt
ttactgagtttattgagtaaccagcagttgtggattgactgaagtaaaaa
ctatagtcttattgatggtgtttttatggctgtggcaagataatagcctt
gacaatagatgcttgatgaattatttgaagagttggacagttttggggga
gggatcattaatctacaatcacttgcaaaactcctgtgacatgtgccgtg
gtgctcactccttggagggagtggaaggatgcaaacaccccaccagacag
aggaggggtaataaagtgttcctgtgctctgaggaccagagagttctttc
tgagggtgtgtgttatggaggacgggaggatgaggaccagagagttcttt
ctgagggtgtgtgtgatggaggacgactggggtgcctttggaggatgggg
gtggggagcatttaataaataataataaagagagggctgctaggaccctg
gatggctacagggggactgggatataatatcttagaagatgttcagttgg
ctgccactatcaggcaaggagctctta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_63522751_63523781
seq2: B6Ng01-047I24.g_70_846

seq1  GAATTCATGTAAAGATTATGCGGTTCGTTTTGGCTATATGGATGGTCTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTAAAGATTATGCGGTTCGTTTTGGCTATATGGATGGTCTAC  50

seq1  TGCAGTTGAGAGAGACCACACTCGACAAGACAGATGTTTCTTGGTTTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTTGAGAGAGACCACACTCGACAAGACAGATGTTTCTTGGTTTTAT  100

seq1  GTTTAGATGCAAGAATCTCAGACAAGCGTGGTGACCTTATTCTGTTTGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGATGCAAGAATCTCAGACAAGCGTGGTGACCTTATTCTGTTTGGT  150

seq1  TTGGATTTTGAAATGGTGGCCGATGGTGTTAGGGTAGCAAGAACCACTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATTTTGAAATGGTGGCCGATGGTGTTAGGGTAGCAAGAACCACTTA  200

seq1  TTGGTTTGTATTTGAAATTTAGTATGTGTTAATTGCCTTTAAAATTCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTGTATTTGAAATTTAGTATGTGTTAATTGCCTTTAAAATTCTGT  250

seq1  TTACTGAGTTTATTGAGTAACCAGCAGTTGTGGATTGACTGAAGTAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGAGTTTATTGAGTAACCAGCAGTTGTGGATTGACTGAAGTAAAAA  300

seq1  CTATAGTCTTATTGATGGTGTTTTTATGGCTGTGGCAAGATAATAGCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGTCTTATTGATGGTGTTTTTATGGCTGTGGCAAGATAATAGCCTT  350

seq1  GACAATAGATGCTTGATGAATTATTTGAAGAGTTGGACAGTTTTGGGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATAGATGCTTGATGAATTATTTGAAGAGTTGGACAGTTTTGGGGGA  400

seq1  GGGATCATTAATCTACAATCACTTGCAAAACTCCTGTGACATGTGCCGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCATTAATCTACAATCACTTGCAAAACTCCTGTGACATGTGCCGTG  450

seq1  GTGCTCACTCCTTGGAGGGAGTGGAAGGATGCAAACACCCCACCAGACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCACTCCTTGGAGGGAGTGGAAGGATGCAAACACCCCACCAGACAG  500

seq1  AGGAGGGGTAATAAAGTGTTCCTGTGCTCTGAGGACCAGAGAGTTCTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGGGTAATAAAGTGTTCCTGTGCTCTGAGGACCAGAGAGTTCTTTC  550

seq1  TGAGGGTGTGTGTTATGGAGGACGGGAGGATGAGGACCAGAGAGTTCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGTGTGTGTTATGGAGGACGGGAGGATGAGGACCAGAGAGTTCTTT  600

seq1  CTGAGGGTGTGTGTGATGGAGGACGACTGGGGTGCCTTTGGAGGATGGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGGTGTGTGTGATGGAGGACGACTGGGGTGCCTTTGGAGGATGGGG  650

seq1  GTGGGGAGCATTTAATAAATAATAATAGAAGAGAGGGCTGCGAGGAGCCT  700
      ||||||||||||||||||||||||||| ||||||||||||| |||| |||
seq2  GTGGGGAGCATTTAATAAATAATAATA-AAGAGAGGGCTGCTAGGACCCT  699

seq1  GGAATGGCAACAGGGGGACTGGGAATATAAAATCTTTAGAGGATGTTTAA  750
      || ||||| |||||||||||||| |||||| ||| ||||| |||| || |
seq2  GG-ATGGCTACAGGGGGACTGGG-ATATAATATC-TTAGAAGATG-TTCA  745

seq1  GTTGGCTGCCAGCTACCAGGCAAGGAGCACTT-TACCTGTTCTTTGGTGC  799
      ||||||||||| ||| |||||||||||| |||                  
seq2  GTTGGCTGCCA-CTATCAGGCAAGGAGCTCTTA-----------------  777

seq1  TCTCACTGCTGTAGGCCTTTGCCTATATCCTTGTCTTTTTCTTTTTTTTA  849
                                                        
seq2  --------------------------------------------------  777

seq1  ACTTGGTAGAATGACAAAGGAAAGCTTTATGCTGGATAGTATACTTCAAC  899
                                                        
seq2  --------------------------------------------------  777

seq1  AGTTCTTCGTTGATTTGTTAATTTACGTTATTCAGGGCACTTCTCTGACC  949
                                                        
seq2  --------------------------------------------------  777

seq1  TATGTGCATCTCCTAACACCTGCTAAATATGACTCTGGATTATTGTTGGG  999
                                                        
seq2  --------------------------------------------------  777

seq1  TTTTGAATGAATGCATCAATTGCAGACTCTTA  1031
                                      
seq2  --------------------------------  777