BAC Information

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BAC

Clone NameB6Ng01-047L02
Chromosome1 (Build37)
Map Location 30,549,432 - 30,550,465
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040665, LOC665944
Downstream geneEG624138, LOC100040699, Phf3, EG638995, Ptp4a1, EG435615, LOC669402, EG435616, 4931428L18Rik, LOC666020, Gluld1, 4930521A18Rik, EG226957, EG624262
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047L02.bB6Ng01-047L02.g
ACCDH872487DH872488
length1,0251,215
definitionDH872487|Mus musculus domesticus DNA, BAC clone: B6Ng01-047L02, 5' end.DH872488|Mus musculus domesticus DNA, BAC clone: B6Ng01-047L02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagcaggaaccattaaactataaacctattaaggtgaaagaatcc
tgatttacctgaagaaaatagtattgatataaatgtgttcaaatcttagg
actgttttgacttgatggatgaaaactaaaaacaagcaatcaaaattttt
aaatgagaaaatatttagatggatatttctccaaagatgacatatagata
gctgtgatataataaaaaattgtaaattcattccatgaccccagtttctg
gcacaaagcatgtaaaattcttgatggtcatcagtcatgaaattactagg
agcctttgttacaatgcctggcattttattccaagtttctgacataaaag
cagccaagactctctgaaggagagctgtactggagattgaaccagtcttc
aatagacagtgcattaatcatctctccagaatggaaactccatgaaaatt
ccaaacaatagtttccaaagttctctttgtttggagaacatgttgagagc
cagaaagaatggcgaaccagagatggaaggagaccctatgggttttgttc
aagattcttcctctacatctcttctaattgattgttccttgatagcatcc
gttatagtaaacaataaaaaccagtttcccctaatactgcaactgagtag
gcacaggaaagctcagctatagttagccaagtcagacagaagtgtgagta
ccagtgagtgatctatgaaccaagatgtcatggtagaatgtggactaatt
ctgggtacttcttataggttgggtaaactgtagcactttcaaccagtgcc
accagaaaatcagagactagtcagcatagaaactggggtttggaattgtt
ttaaatatacaaagcagctttatccctttaatggccattgaaacacaaag
agataataaaattcactagtcactagtttgtgttaagtcagatccacatg
atataccatttaacagctactgaaatagcatatttctagtactttaaaat
acgtgaaatgtaacaatgattatgc
gaattcaaggccagagtgacatctggtctatagagggagttccaggatgg
ccagggttacacaaagaaaccctgtattaaattcccccttgggaaaaata
agactcattaaaaaaaaaaaaagagcaacaaaagaaagaaaaaagttggg
acgtataacattagtggaacgtgaagatacacaaagtgaagtaaataggt
cacaaaagggcagatgcagtgtgattccttacatataggatttctggaat
aaccaggtttagtggttatggaaatacagtggttgctaaaggtggaaggg
agtagaaagcacaggtcctccctccaagatcccaagtcagggttgttcta
tgccactcacagaggaaataccaagtgtgaaggtaaatcttcgttgtcag
ttggaatggatttagaatcccctaaaggacacactcttgggtatgtctgt
gagtgtttttacagaggttaaactaatgaagaatgatccgccctgaatgt
gagaggcacaattccatggctgggaaccttgacttactaaaaggggggaa
acagagcatgcattgagcagcagtgctcacctcggcttcctaatgaggaa
tcaacaagctgcctggtgccactcccactgttgagccttgtctacaatga
tgggctgtatcttctcaaacagggagcaaacagtcccctctttttttgtt
gttgtttgtttgttgttgttttttccatgatgttgtagaactgaaagaaa
gatgaaatttcagacctgtaagtcatataaagtgctcagaaattgctggt
tgtttgtgagcctagaggctgcctggggctgagaacaaagaagaacaaac
ccggcatgcaccgtcataaagcattcctggaatagcttgattataaaaaa
taaagaggaatgtgaggaaataacaagggctttctgaactgagtcaacac
atttggcccggcacctccctctgcccatgccctttgacgagttaaagtca
taatacagatactctgctagcatgataaacatcactcacagaaccctgac
ctgaagtattctttgctgactgaatctttgctgtgtttgataggcatagg
tgtcatatctgaatcccaccctaggtccttacccataaacccctgccttc
agcttggtcgatccggtcctagtgatcgtcaatccagagtcagacgctat
taaacaactccgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_30549432_30550465
seq2: B6Ng01-047L02.b_43_1067

seq1  GAATTCAGCAGGAACCATTAAACTATAAACCTATTAAGGTGAAAGAATCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCAGGAACCATTAAACTATAAACCTATTAAGGTGAAAGAATCC  50

seq1  TGATTTACCTGAAGAAAATAGTATTGATATAAATGTGTTCAAATCTTAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTACCTGAAGAAAATAGTATTGATATAAATGTGTTCAAATCTTAGG  100

seq1  ACTGTTTTGACTTGATGGATGAAAACTAAAAACAAGCAATCAAAATTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTTTGACTTGATGGATGAAAACTAAAAACAAGCAATCAAAATTTTT  150

seq1  AAATGAGAAAATATTTAGATGGATATTTCTCCAAAGATGACATATAGATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAGAAAATATTTAGATGGATATTTCTCCAAAGATGACATATAGATA  200

seq1  GCTGTGATATAATAAAAAATTGTAAATTCATTCCATGACCCCAGTTTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGATATAATAAAAAATTGTAAATTCATTCCATGACCCCAGTTTCTG  250

seq1  GCACAAAGCATGTAAAATTCTTGATGGTCATCAGTCATGAAATTACTAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAAAGCATGTAAAATTCTTGATGGTCATCAGTCATGAAATTACTAGG  300

seq1  AGCCTTTGTTACAATGCCTGGCATTTTATTCCAAGTTTCTGACATAAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTTGTTACAATGCCTGGCATTTTATTCCAAGTTTCTGACATAAAAG  350

seq1  CAGCCAAGACTCTCTGAAGGAGAGCTGTACTGGAGATTGAACCAGTCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAAGACTCTCTGAAGGAGAGCTGTACTGGAGATTGAACCAGTCTTC  400

seq1  AATAGACAGTGCATTAATCATCTCTCCAGAATGGAAACTCCATGAAAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGACAGTGCATTAATCATCTCTCCAGAATGGAAACTCCATGAAAATT  450

seq1  CCAAACAATAGTTTCCAAAGTTCTCTTTGTTTGGAGAACATGTTGAGAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACAATAGTTTCCAAAGTTCTCTTTGTTTGGAGAACATGTTGAGAGC  500

seq1  CAGAAAGAATGGCGAACCAGAGATGGAAGGAGACCCTATGGGTTTTGTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGAATGGCGAACCAGAGATGGAAGGAGACCCTATGGGTTTTGTTC  550

seq1  AAGATTCTTCCTCTACATCTCTTCTAATTGATTGTTCCTTGATAGCATCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTCTTCCTCTACATCTCTTCTAATTGATTGTTCCTTGATAGCATCC  600

seq1  GTTATAGTAAACAATAAAAACCAGTTTCCCCTAATACTGCAACTGAGTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAGTAAACAATAAAAACCAGTTTCCCCTAATACTGCAACTGAGTAG  650

seq1  GCACAGGAAAGCTCAGCTATAGTTAGCCAAGTCAGACAGAAGTGTGAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGGAAAGCTCAGCTATAGTTAGCCAAGTCAGACAGAAGTGTGAGTA  700

seq1  CCAGTGAGTGATCTATGAACCAAGATGTCATGGTAGAATGTGGACTAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGAGTGATCTATGAACCAAGATGTCATGGTAGAATGTGGACTAATT  750

seq1  CTGGGTACTTCTTATAGGTTGGGTAAAACTGTAGCACTTTCAACCAGTGC  800
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CTGGGTACTTCTTATAGGTTGGGT-AAACTGTAGCACTTTCAACCAGTGC  799

seq1  CACCAGAAAATCAGAGACTAGTCAGCATAGAAACTGGGG-TTGGAATTGT  849
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CACCAGAAAATCAGAGACTAGTCAGCATAGAAACTGGGGTTTGGAATTGT  849

seq1  TTTAAATATACAAAAGCAGCTTTATCCCTTTAATGGCCATTGAAACACAA  899
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATATAC-AAAGCAGCTTTATCCCTTTAATGGCCATTGAAACACAA  898

seq1  AGAGATAATAAAATTCACTAGTCACTAGGTTTGTG-TAAGTCAGATCCAC  948
      ||||||||||||||||||||||||||| ||||||| ||||||||||||||
seq2  AGAGATAATAAAATTCACTAGTCACTA-GTTTGTGTTAAGTCAGATCCAC  947

seq1  ATGATATACCATGTAACAGCTACTGAAATAGCAATAATTTCTTAGTACTT  998
      |||||||||||| ||||||||||||||||||||   ||||| ||||||||
seq2  ATGATATACCATTTAACAGCTACTGAAATAGCA--TATTTC-TAGTACTT  994

seq1  TAAAATACGGGTGGAAATGTTAACAAATGATTATGC  1034
      |||||||||    |||||| |||| |||||||||||
seq2  TAAAATACG---TGAAATG-TAAC-AATGATTATGC  1025