BAC Information

Click to search

BAC

Clone NameB6Ng01-048H10
Chromosome1 (Build37)
Map Location 99,507,228 - 99,508,174
singlet/doubletsinglet
Overlap genenone
Upstream geneGm1833, Slco4c1, EG329217, Slco6b1, LOC670708, LOC623430, Slco6c1, EG634331, EG634346
Downstream geneD1Ertd622e, Hisppd1, Zh2c2, Pam, LOC100041823, LOC666153, LOC100040887, Slco6d1, LOC100041868, EG666182
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-048H10.bB6Ng01-048H10.g
ACCDH873012DH873013
length9441,221
definitionDH873012|Mus musculus domesticus DNA, BAC clone: B6Ng01-048H10, 5' end.DH873013|Mus musculus domesticus DNA, BAC clone: B6Ng01-048H10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctaagactatcaggacaaaattctaaaatataaatctatcttt
caaattgttttatggacattgtcctgaagtaatctatgaaggagaaggat
ggggattattttgtatctgctttgcaatctagctgagtagttcactttag
tatagatccatgcaaccctatgatatcattaattgctattattttcttaa
taattatgtatccttaaaacatgttacattattttatactctaggtatga
acctgctcatttcaataatgtactttgtgataccagtagtaaaggcaaat
gtatcaaaagaccaaagccttatctgaaacagtacaaatgaagaatgctt
aactctcagttaagatggagaatgggttctagactcaagttgctatagta
tatagcaattaaaagttggtttctttataggacctcgatgttggtagtta
tgtagttatgaggagaaaaagtgaaaactttctctactgtagtatgcttc
caactgaggaagcatattaataaaattacacactaatgataaaataaaaa
tcactcaagtgagagggataaatcataactgtaataaatggtaagaagga
aggttactgtgagtatgtgtaataggcatgacttagatttaatttcccaa
ggaactgaatagtgaagtgaaatttgattgtgggcaggagctgggaagga
catcgagagatgttatgacagagtatatagtagatagatcactgtatgct
tgcacatgtagatagagagtgagtgtgtctactggtatgtggaaagggct
tgcagagagtgctgtaggatttgtgttttgaaagtttgactcttctgcac
tatgaaaaagcatcagaagtgtgagaccagaactggtgacccagagtggg
aaataacaccagtagagtaagggatgatgattatggattggaga
gaattctctattgaggaatactgaatggctgaaaagcacctaaagaaatt
ttcaacatccttagtcatcacggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaaaatcaaaacatcaggtgacaaa
agatgctggtaagaatgtggagaaaaagaaacactcctccacttctggtg
ggattgcaaactactctgaaaatcagtttggcagttcctcagaaaattag
acatagctgagggcccagatataccactcctggacacatacccagaagat
gctccaacatgtaataggaacacatgctccactatgttcaaagcagcttt
aggtataaataaaatagccagaagctggaaagaacccagatgtccttcaa
cagataattgaatacagaaattgtgatacatttacacaatggagtactat
tcagctattaaaaatggtgaatcatgaagttcttaggcaaatggatagaa
ttaaaatatcaccctgagtggggtaacccaatcacaaaagaacacacatg
gtatacacttactgataagtggatattagcccagaagttcggtttaccca
agatacaagtctcagaccacatgaagctctagaaggaaaaccacattgtg
gatacttcagtccttcttagaattgggaacaaaatacccatgggaggaaa
tacagagacaaagtttgcagcagaaactgaaggaaaagccatcaagtgac
tgacctacctggggatccatcccatatacagttatcaaacccagacacta
ttgtggatgccaacaagtgcttgctacagaagtctgaaataactgtctcc
tgagagggcctgccagtgctcacaaatacagaagtggacgattacagccc
tcaattggactgacacaggatcccagtggagagctagagaatgacctaga
gctgagggtttgcagcccatagcagacaatatgacacatacactcagagc
tccagagactaactacaccaagagtaccatggaaggactttagctctagc
tgcatatgtagcgagatgcctgtgaaacatcaatgagagaaagcccttga
tctctgagctcatgccaaggatgaaatgcaaacgtaccagagtgttgcct
atcgaacagggagataatggggcatctatggaggataccatctagtgtca
catacatcattgatcgaatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_99507228_99508174
seq2: B6Ng01-048H10.b_45_988 (reverse)

seq1  TCTCCAATCCATAATCCATCATCCCTTACCTCTACTGGTGTTATTTCCCA  50
      ||||||||||||||| |||||||||||| |||||||||||||||||||||
seq2  TCTCCAATCCATAAT-CATCATCCCTTA-CTCTACTGGTGTTATTTCCCA  48

seq1  CTCTGGGTCACCAGTTCTGGTCTCACACCTTCTGATGCTTTTTCATAGTG  100
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CTCTGGGTCACCAGTTCTGGTCTCACA-CTTCTGATGCTTTTTCATAGTG  97

seq1  CAGAAGAGTCAAACTTTCAAAACACAAATCCTACAGCACTCTCTGCAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGAGTCAAACTTTCAAAACACAAATCCTACAGCACTCTCTGCAAGC  147

seq1  CCTTTCCACATACCAGTAGACACACTCACTCTCTATCTACATGTGCAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCACATACCAGTAGACACACTCACTCTCTATCTACATGTGCAAGC  197

seq1  ATACAGTGATCTATCTACTATATACTCTGTCATAACATCTCTCGATGTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGTGATCTATCTACTATATACTCTGTCATAACATCTCTCGATGTCC  247

seq1  TTCCCAGCTCCTGCCCACAATCAAATTTCACTTCACTATTCAGTTCCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAGCTCCTGCCCACAATCAAATTTCACTTCACTATTCAGTTCCTTG  297

seq1  GGAAATTAAATCTAAGTCATGCCTATTACACATACTCACAGTAACCTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTAAATCTAAGTCATGCCTATTACACATACTCACAGTAACCTTCC  347

seq1  TTCTTACCATTTATTACAGTTATGATTTATCCCTCTCACTTGAGTGATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTACCATTTATTACAGTTATGATTTATCCCTCTCACTTGAGTGATTT  397

seq1  TTATTTTATCATTAGTGTGTAATTTTATTAATATGCTTCCTCAGTTGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTATCATTAGTGTGTAATTTTATTAATATGCTTCCTCAGTTGGAA  447

seq1  GCATACTACAGTAGAGAAAGTTTTCACTTTTTCTCCTCATAACTACATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACTACAGTAGAGAAAGTTTTCACTTTTTCTCCTCATAACTACATAA  497

seq1  CTACCAACATCGAGGTCCTATAAAGAAACCAACTTTTAATTGCTATATAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCAACATCGAGGTCCTATAAAGAAACCAACTTTTAATTGCTATATAC  547

seq1  TATAGCAACTTGAGTCTAGAACCCATTCTCCATCTTAACTGAGAGTTAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCAACTTGAGTCTAGAACCCATTCTCCATCTTAACTGAGAGTTAAG  597

seq1  CATTCTTCATTTGTACTGTTTCAGATAAGGCTTTGGTCTTTTGATACATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTCATTTGTACTGTTTCAGATAAGGCTTTGGTCTTTTGATACATT  647

seq1  TGCCTTTACTACTGGTATCACAAAGTACATTATTGAAATGAGCAGGTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTACTACTGGTATCACAAAGTACATTATTGAAATGAGCAGGTTCA  697

seq1  TACCTAGAGTATAAAATAATGTAACATGTTTTAAGGATACATAATTATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTAGAGTATAAAATAATGTAACATGTTTTAAGGATACATAATTATTA  747

seq1  AGAAAATAATAGCAATTAATGATATCATAGGGTTGCATGGATCTATACTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATAATAGCAATTAATGATATCATAGGGTTGCATGGATCTATACTA  797

seq1  AAGTGAACTACTCAGCTAGATTGCAAAGCAGATACAAAATAATCCCCATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAACTACTCAGCTAGATTGCAAAGCAGATACAAAATAATCCCCATC  847

seq1  CTTCTCCTTCATAGATTACTTCAGGACAATGTCCATAAAACAATTTGAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCCTTCATAGATTACTTCAGGACAATGTCCATAAAACAATTTGAAA  897

seq1  GATAGATTTATATTTTAGAATTTTGTCCTGATAGTCTTAGAGAATTC  947
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGATTTATATTTTAGAATTTTGTCCTGATAGTCTTAGAGAATTC  944