BAC Information

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BAC

Clone NameB6Ng01-049G13
Chromosome1 (Build37)
Map Location 178,986,382 - 179,131,807
singlet/doubletdoublet
Overlap geneAkt3
Upstream genePld5, Cep170, Sdccag8, LOC666235
Downstream geneZfp238, EG631449, LOC100040770, 1700016C15Rik, Adss, EG631584, EG545391, LOC666262, 5830417C01Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-049G13.bB6Ng01-049G13.g
ACCDH873682DH873683
length1,0451,057
definitionDH873682|Mus musculus domesticus DNA, BAC clone: B6Ng01-049G13, 5' end.DH873683|Mus musculus domesticus DNA, BAC clone: B6Ng01-049G13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(178,986,382 - 178,987,434)(179,130,741 - 179,131,807)
sequence
gaattcaaacctctgcattccaacaaggctgttcactgactgccacacat
gcacatggcattgtgtacaaatgcactcacaatgcttatattcaccaata
tatatacatacaataattaaatggaatacatttttaaatatgtaaaaatg
actgcttaatgagttttaaaaaatggataatctcttgaatactgtaaact
cttagaaatgacagaagtctttgcattcagtgcctagtttgtcattcagt
tgataatgtctgcacagaaaacagtatctttgtttcttagaagatcatct
gcttctggaatgtgtttttatcctcttcagaataattccttctaattgtg
atataactaatttgggtattctaaatatggaatgccatcattcattacaa
atgtatagcaagggcaactgaatgccagagaaacaaagacattgtttacc
acgacattcacaaaaaaacaaaacttgtccagaaaatatgatcttatatt
tgaataaataaaacataatttctaaaattttatgtactctgtaatgaaaa
cagagaattttaaactctagcatctataacagagaaaattacatgtttgg
caagacaacaatacttggaaatatactttaaatattagcacttatttata
attactaagccttttgaaatgttaatttaactcctagtttaaaaaacact
gtaaggcaacatgataatacatacataatttattctagtttctaatttct
ttgattactgtttcctgttgggccatcgttcatacgattatagatgaaga
ggtaggctttatgagctaccaaaccctaattagaatcttaatattcctag
ggagtacagaggagtagtatcatatcacaacatattatttacatagatga
aactctcaaagataattgagagagagacagagacagagaggagagagaga
ctgagagagactgagagagagacagagagagacaagacgaatgctgcact
actgtaccccatatcacctctaactgtatatggattataatgaaa
gaattccacagtctcctgtgagaacacataccccattgacctaaggactt
gtcattaggctcctagagcttgctagcacttaccagtagtgccacctggg
gacaagccctgtaaaacatggtcttttgtggcattcagtaatcaaactgc
agttcccaatacagaaactaacttctttaagtgttctggtgtaatattta
aagcttttttatgactgtctcatggtcattataaatttacatcctcaaaa
cagaaactgtctttttttggttaatgtattcttttctgtctttcctgtga
taagtcgctaggcttctttaggtcactgtgctagaaatgcccagatcttc
tgatttctaagcatgtggtattcttttgtgctgttaattttataaatgtg
tgtgtctgtttgtttgtttgtttgtttttaccaattctaggaatttttct
cccaaggaaacttacaacctcatgttggctatatatttctctctctgatt
ctataaacccatgtattttctgcagtcaagacaaggtagttactgttcct
ttcttaatctaaaccagatattcactgtaacacagcaggatcttaataaa
tacttactaaatttgaatgggcactttgtttccttcctcagttgaaaaca
gtacacacacatacatactatacagattcatttctgaactgtaaattttg
attctgctatattgatagctactatacttgattatttctgaagtttcact
tttgctattgaaaatataatcagattctttttttttggcagacttgatag
gttcggggatttcaaagagaaatagggcatcattttctagttaaaagaat
tgttttatattaggtgtataagtgtttcctgggggcatgcatgtgcacag
tggctagtaagaacatcacatctgggacgtgggtggtaggaacagagctc
aagtctctgaatgtgctcttactgctgagcctctttctctcttattcccc
atttcttactgaaagatgattaggattgtagaagcagactcttctattgc
ctttgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_178986382_178987434
seq2: B6Ng01-049G13.b_48_1092

seq1  GAATTCAAACCTCTGCATTCCAACAAGGCTGTTCACTGACTGCCACACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACCTCTGCATTCCAACAAGGCTGTTCACTGACTGCCACACAT  50

seq1  GCACATGGCATTGTGTACAAATGCACTCACAATGCTTATATTCACCAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATGGCATTGTGTACAAATGCACTCACAATGCTTATATTCACCAATA  100

seq1  TATATACATACAATAATTAAATGGAATACATTTTTAAATATGTAAAAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACATACAATAATTAAATGGAATACATTTTTAAATATGTAAAAATG  150

seq1  ACTGCTTAATGAGTTTTAAAAAATGGATAATCTCTTGAATACTGTAAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTTAATGAGTTTTAAAAAATGGATAATCTCTTGAATACTGTAAACT  200

seq1  CTTAGAAATGACAGAAGTCTTTGCATTCAGTGCCTAGTTTGTCATTCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGAAATGACAGAAGTCTTTGCATTCAGTGCCTAGTTTGTCATTCAGT  250

seq1  TGATAATGTCTGCACAGAAAACAGTATCTTTGTTTCTTAGAAGATCATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAATGTCTGCACAGAAAACAGTATCTTTGTTTCTTAGAAGATCATCT  300

seq1  GCTTCTGGAATGTGTTTTTATCCTCTTCAGAATAATTCCTTCTAATTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTGGAATGTGTTTTTATCCTCTTCAGAATAATTCCTTCTAATTGTG  350

seq1  ATATAACTAATTTGGGTATTCTAAATATGGAATGCCATCATTCATTACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAACTAATTTGGGTATTCTAAATATGGAATGCCATCATTCATTACAA  400

seq1  ATGTATAGCAAGGGCAACTGAATGCCAGAGAAACAAAGACATTGTTTACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATAGCAAGGGCAACTGAATGCCAGAGAAACAAAGACATTGTTTACC  450

seq1  ACGACATTCACAAAAAAACAAAACTTGTCCAGAAAATATGATCTTATATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGACATTCACAAAAAAACAAAACTTGTCCAGAAAATATGATCTTATATT  500

seq1  TGAATAAATAAAACATAATTTCTAAAATTTTATGTACTCTGTAATGAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAAATAAAACATAATTTCTAAAATTTTATGTACTCTGTAATGAAAA  550

seq1  CAGAGAATTTTAAACTCTAGCATCTATAACAGAGAAAATTACATGTTTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAATTTTAAACTCTAGCATCTATAACAGAGAAAATTACATGTTTGG  600

seq1  CAAGACAACAATACTTGGAAATATACTTTAAATATTAGCACTTATTTATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACAACAATACTTGGAAATATACTTTAAATATTAGCACTTATTTATA  650

seq1  ATTACTAAGCCTTTTGAAATGTTAATTTAACTCCTAGTTTAAAAAACACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTAAGCCTTTTGAAATGTTAATTTAACTCCTAGTTTAAAAAACACT  700

seq1  GTAAGGCAACATGATAATACATACATAATTTATTCTAGTTTCTAATTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGCAACATGATAATACATACATAATTTATTCTAGTTTCTAATTTCT  750

seq1  TTGATTACTGTTTCCTGTTGGGCCATCGTTCATACGATTATAGATGAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTACTGTTTCCTGTTGGGCCATCGTTCATACGATTATAGATGAAGA  800

seq1  GGTAGGCTTTATGAGCTACCAAACCCTAATTAGAATCTTAATATTCCTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGGCTTTATGAGCTACCAAACCCTAATTAGAATCTTAATATTCCTAG  850

seq1  GGAGTACAGAGGAGTAGTATCATATCACAACATATTATTTACATAGATGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTACAGAGGAGTAGTATCATATCACAACATATTATTTACATAGATGA  900

seq1  AACTCTCAAAGAATAATTGAGAGAGAGACAGAGACAGAGAGGGAGAGAGA  950
      ||||||||||| |||||||||||||||||||||||||||| |||||||||
seq2  AACTCTCAAAG-ATAATTGAGAGAGAGACAGAGACAGAGA-GGAGAGAGA  948

seq1  GACAGAGAGAGACAGAGAGAGAGACAGAGAGAGACAAAGACAGAATGCTG  1000
      ||| ||||||||| ||||||||||||||||||||| ||||| ||||||||
seq2  GACTGAGAGAGACTGAGAGAGAGACAGAGAGAGAC-AAGAC-GAATGCTG  996

seq1  CACTACTGTACCCCATATCACCTTCTAACTGTATATGGATTATTAAAATG  1050
      |||||||||||||||||||||| ||||||||||||||||||||   ||||
seq2  CACTACTGTACCCCATATCACC-TCTAACTGTATATGGATTAT---AATG  1042

seq1  AAA  1053
      |||
seq2  AAA  1045

seq1: chr1_179130741_179131807
seq2: B6Ng01-049G13.g_67_1123 (reverse)

seq1  TCCAAAAAGCAAAAGAAGATGTCTGCTTCTTTACAATTCCTAATTCCATC  50
      ||| ||| |||| |||||| |||||||||  ||||| |||||||  ||||
seq2  TCC-AAAGGCAATAGAAGA-GTCTGCTTC--TACAA-TCCTAAT--CATC  43

seq1  TTTTAAATACAGAAATGGGGAAATGAGAGAGAAAGAAGGCTCAGCAGTTA  100
       ||| | || |||||||||| ||| |||||||||| ||||||||||| ||
seq2  -TTTCAGTA-AGAAATGGGG-AATAAGAGAGAAAG-AGGCTCAGCAG-TA  88

seq1  AGAGCACATACAGAAGACCTGAGCTCTGTTCCTACCACCCACGTTCCAGA  150
      ||||||||| ||| |||| ||||||||||||||||||||||||| |||||
seq2  AGAGCACATTCAG-AGACTTGAGCTCTGTTCCTACCACCCACGTCCCAGA  137

seq1  TGTGATGTTCTTACCTAGCCACTGTGCACACTGCATGCCCACAAGAAACA  200
      ||||||||||||| |||||||||||||||| ||||||||| || ||||||
seq2  TGTGATGTTCTTA-CTAGCCACTGTGCACA-TGCATGCCCCCAGGAAACA  185

seq1  CTTATACACCTAATATAAAACAATTCTTTTAACTAGAAAATGATGCCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CTTATACACCTAATATAAAACAATTCTTTTAACTAGAAAATGATGCCCTA  235

seq1  TTTCTCTTTGAAATCCCCGAACCTATCAAGTCTGGC-AAAAAAAAGAATC  299
      |||||||||||||||||||||||||||||||||| | |||||||||||||
seq2  TTTCTCTTTGAAATCCCCGAACCTATCAAGTCTGCCAAAAAAAAAGAATC  285

seq1  TGATTATATTTTCAATAGCAAAAGTGAAACTTCAGAAAT-ATC-AGTATA  347
      ||||||||||||||||||||||||||||||||||||||| ||| ||||||
seq2  TGATTATATTTTCAATAGCAAAAGTGAAACTTCAGAAATAATCAAGTATA  335

seq1  GTAGCTATCAATATAGCAGAATCAAAATTTACAGTTCAGAAATG-ATCTG  396
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GTAGCTATCAATATAGCAGAATCAAAATTTACAGTTCAGAAATGAATCTG  385

seq1  TATAGTATGTATGTGTGTGTACTGTTTTCAACTGAGGAAGGAAAC-AAGT  445
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TATAGTATGTATGTGTGTGTACTGTTTTCAACTGAGGAAGGAAACAAAGT  435

seq1  GCCCATTCAAATTTAGTAAGTATTTATTAAGATCCTGCTGTGTTACAGTG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATTCAAATTTAGTAAGTATTTATTAAGATCCTGCTGTGTTACAGTG  485

seq1  AATATCTGGTTTAGATTAAGAAAGGAACAGTAACTACCTTGTCTTGACTG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTGGTTTAGATTAAGAAAGGAACAGTAACTACCTTGTCTTGACTG  535

seq1  CAGAAAATACATGGGTTTATAGAATCAGAGAGAGAAATATATAGCCAACA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAATACATGGGTTTATAGAATCAGAGAGAGAAATATATAGCCAACA  585

seq1  TGAGGTTGTAAGTTTCCTTGGGAGAAAAATTCCTAGAATTGGTAAAAACA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTTGTAAGTTTCCTTGGGAGAAAAATTCCTAGAATTGGTAAAAACA  635

seq1  AACAAACAAACAAACAGACACACACATTTATAAAATTAACAGCACAAAAG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACAAACAAACAGACACACACATTTATAAAATTAACAGCACAAAAG  685

seq1  AATACCACATGCTTAGAAATCAGAAGATCTGGGCATTTCTAGCACAGTGA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCACATGCTTAGAAATCAGAAGATCTGGGCATTTCTAGCACAGTGA  735

seq1  CCTAAAGAAGCCTAGCGACTTATCACAGGAAAGACAGAAAAGAATACATT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAGAAGCCTAGCGACTTATCACAGGAAAGACAGAAAAGAATACATT  785

seq1  AACCAAAAAAAGACAGTTTCTGTTTTGAGGATGTAAATTTATAATGACCA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAAAAAAGACAGTTTCTGTTTTGAGGATGTAAATTTATAATGACCA  835

seq1  TGAGACAGTCATAAAAAAGCTTTAAATATTACACCAGAACACTTAAAGAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACAGTCATAAAAAAGCTTTAAATATTACACCAGAACACTTAAAGAA  885

seq1  GTTAGTTTCTGTATTGGGAACTGCAGTTTGATTACTGAATGCCACAAAAG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTTTCTGTATTGGGAACTGCAGTTTGATTACTGAATGCCACAAAAG  935

seq1  ACCATGTTTTACAGGGCTTGTCCCCAGGTGGCACTACTGGTAAGTGCTAG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGTTTTACAGGGCTTGTCCCCAGGTGGCACTACTGGTAAGTGCTAG  985

seq1  CAAGCTCTAGGAGCCTAATGACAAGTCCTTAGGTCAATGGGGTATGTGTT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTCTAGGAGCCTAATGACAAGTCCTTAGGTCAATGGGGTATGTGTT  1035

seq1  CTCACAGGAGACTGTGGAATTC  1067
      ||||||||||||||||||||||
seq2  CTCACAGGAGACTGTGGAATTC  1057