BAC Information

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BAC

Clone NameB6Ng01-049O09
Chromosome1 (Build37)
Map Location 113,557,100 - 113,557,773
singlet/doubletsinglet
Overlap genenone
Upstream geneCdh19
Downstream geneEG666578, Dsel, LOC547247, EG626897, LOC666615
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-049O09.bB6Ng01-049O09.g
ACCDH874019DH874020
length749674
definitionDH874019|Mus musculus domesticus DNA, BAC clone: B6Ng01-049O09, 5' end.DH874020|Mus musculus domesticus DNA, BAC clone: B6Ng01-049O09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttgggtgtccgctactgtcccaaggcctgagcaaggggctcctc
ttggagtctttcactctcagtgtgaaagaaaataaaacttgagacctgtg
attcatgtaatttatgtcaaatatcccaaagagttgtttgtgagctttga
aacctggggctgagaacatagcagaacaagccaggacatgcccaggcaag
cccatcgttaagacattcctgaggctgcttggccataatgataaagagaa
gtgtggacactttgccccttcttagaattggaaacaatctcccatggaag
gagttacagagacaaaggatggaccatctagagactgcaatatccaggga
tccatcacataattagcctccaaacgatgacaccattgcatacactagca
agcctttgttgcaaggaccgtgatatagctgtctcttgtgagactaggct
ggggcctagcaaacacagaagtggatgctcacagtcaactattggatgga
tcacagggcccccaatggaggagctagagaaagtatccaaggagctaaag
agatctgcaaccccgtaggtgcaacattatgaactaaccagtaccccgga
gctcttgactctagctgcatatgtatcaaaagatggcctagttggccatc
actggaaagagatgtccattggacaggcaaactttatatgccccagtaca
ggggaacgccagggccaaaaaatgggaatgggtgggtaggggagtgggg
gaattcatttcaccccacataagaaagaaaagaagagaaagaaaaggaaa
gaaaacacaaaagaaaaaagctaattattagcgacaagaaggaatctaaa
tgtagcccttacagtaagttttacatttgtctaatttctatttaattcct
ctcatctttagcaaataaacagataataaacataattcaaaggttgaaat
ttccgttattttaaatctatcactacattgaattttttcgataatgaatc
tagaaaagaaaaattgatataattatgcttctataaatgtttgttttaaa
tatgtatttaggatttcaaaacacatttctatattttccctttaattctc
tctctctctctttttctcttattagaaagtaaaagagaacaaagaaacaa
aacccacctcctcagctaagtggtgagaacaaacctaactctagaattca
aacttagaaggatctactttttaaactgttttacattataaaaaacgctc
tcaatcactggtctaccaaccaggcagcatacaccagctgatatgaggtc
ctcaacacatatacagcagatacatacatatacctggtctgggttcagtc
agagaagatgcacccaaccctcaagagaatggaggctccagggagtttaa
aggtctgtttggggggggggggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_113557100_113557773
seq2: B6Ng01-049O09.g_70_743

seq1  GAATTCATTTCACCCCACATAAGAAAGAAAAGAAGAGAAAGAAAAGGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTCACCCCACATAAGAAAGAAAAGAAGAGAAAGAAAAGGAAA  50

seq1  GAAAACACAAAAGAAAAAAGCTAATTATTAGCGACAAGAAGGAATCTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACACAAAAGAAAAAAGCTAATTATTAGCGACAAGAAGGAATCTAAA  100

seq1  TGTAGCCCTTACAGTAAGTTTTACATTTGTCTAATTTCTATTTAATTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCCCTTACAGTAAGTTTTACATTTGTCTAATTTCTATTTAATTCCT  150

seq1  CTCATCTTTAGCAAATAAACAGATAATAAACATAATTCAAAGGTTGAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCTTTAGCAAATAAACAGATAATAAACATAATTCAAAGGTTGAAAT  200

seq1  TTCCGTTATTTTAAATCTATCACTACATTGAATTTTTTCGATAATGAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCGTTATTTTAAATCTATCACTACATTGAATTTTTTCGATAATGAATC  250

seq1  TAGAAAAGAAAAATTGATATAATTATGCTTCTATAAATGTTTGTTTTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAGAAAAATTGATATAATTATGCTTCTATAAATGTTTGTTTTAAA  300

seq1  TATGTATTTAGGATTTCAAAACACATTTCTATATTTTCCCTTTAATTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATTTAGGATTTCAAAACACATTTCTATATTTTCCCTTTAATTCTC  350

seq1  TCTCTCTCTCTTTTTCTCTTATTAGAAAGTAAAAGAGAACAAAGAAACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTTTTTCTCTTATTAGAAAGTAAAAGAGAACAAAGAAACAA  400

seq1  AACCCACCTCCTCAGCTAAGTGGTGAGAACAAACCTAACTCTAGAATTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCACCTCCTCAGCTAAGTGGTGAGAACAAACCTAACTCTAGAATTCA  450

seq1  AACTTAGAAGGATCTACTTTTTAAACTGTTTTACATTATAAAAAACGCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAGAAGGATCTACTTTTTAAACTGTTTTACATTATAAAAAACGCTC  500

seq1  TCAATCACTGGTCTACCAACCAGGCAGCATACACCAGCTGATATGAGGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCACTGGTCTACCAACCAGGCAGCATACACCAGCTGATATGAGGTC  550

seq1  CTCAACACATATACAGCAGATACATACATATACCTGGTCTGGGTTCAGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACACATATACAGCAGATACATACATATACCTGGTCTGGGTTCAGTC  600

seq1  AGAGAAGATGCACCCAACCCTCAAGAGAATGGAGGCTCCAGGGAGTTTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGATGCACCCAACCCTCAAGAGAATGGAGGCTCCAGGGAGTTTAA  650

seq1  AGGTCTGTTTGGGGGGGGGGGGTA  674
      ||||||||||||||||||||||||
seq2  AGGTCTGTTTGGGGGGGGGGGGTA  674