BAC Information

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BAC

Clone NameB6Ng01-050A24
Chromosome1 (Build37)
Map Location 28,195,316 - 28,270,505
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC677427, LOC100040952, EG433281
Downstream geneEG665903, Gm597, LOC435614, EG623924
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050A24.bB6Ng01-050A24.g
ACCDH874124DH874125
length956332
definitionDH874124|Mus musculus domesticus DNA, BAC clone: B6Ng01-050A24, 5' end.DH874125|Mus musculus domesticus DNA, BAC clone: B6Ng01-050A24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(28,195,316 - 28,196,278)(28,270,182 - 28,270,505)
sequence
gaattcatataattatccatcatccatttgttgtaattgagtactaccct
gtatttgcatatttcaaataatatttaataaatgattgaaagatattgtt
gcacaaaagtaatttcaaaatgctttaaataaatgtaattattatatatg
accatactgttatagaggattactttgggaagaatctctaataatgagac
tgaagtttcttctcctaggaaagcaagttatttcatgattcctgatgcct
gcctttaacttctatttttactaactgaagagaacagcatcagagatgta
ggttaaaataagataaaatactctcagaaaaacaaactaatgaagctcat
gttttatgttagtgagatatatgttttgtcatgtcacagaaagtactagt
gccactatgtaataaagtgatgtaaaccaagaagttctatggtccagcat
ttgctaaagacactttattgttgttgttttttctttgtttgtctgctatt
attattattattattattattattccttttctgtttttcttttggttgtt
tgatacttttccctggcctattaatccaatctctttccatgaagttcaga
ccaaggctcaggtgtatactttaaaacatattgttttattttattttatt
attttttaagggacgataatcagtaatataaactttttttgacccacaaa
atgtgaaattaaaacaaaacaccatgttccctttagggtcttcctttttt
gaaatcttttcaatctacttgttgcaaatactgtttagggatgagaagca
ctttacatgcaatcctgatctcatggagcaatataatatcaaagacaagt
ctttgctaatctgaaagctaatggaaacagtggggtcatgtattccttcc
atgtgccacaaatgtcatggttagtgtgtaacaacagatggttatttttc
attttt
tctatttgttttggagaaaataatatctacataggcaactgtgtgaatcc
aagttcagttaacgatttgggtgtttttgaaattaagtatttagtgtctt
tagtatctttagaggtatgttataatgttaatatccaagttagctgaatg
gatacctaagtccataaatataaaatttatatgtcatgtgatatagctaa
tatggtagtgaaacatgaactgaaatgttgtttcagaactctaatttcca
tgacatcttcagcaagaattctatttatgatatttttttgactgaggcag
ggtctcatgtattgtttaactggattcaaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_28195316_28196278
seq2: B6Ng01-050A24.b_29_984

seq1  GAATTCATATAATTATCCATCATCCATTTGTTGTAATTGAGTACTACCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATAATTATCCATCATCCATTTGTTGTAATTGAGTACTACCCT  50

seq1  GTATTTGCATATTTCAAATAATATTTAATAAATGATTGAAAGATATTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTGCATATTTCAAATAATATTTAATAAATGATTGAAAGATATTGTT  100

seq1  GCACAAAAGTAATTTCAAAATGCTTTAAATAAATGTAATTATTATATATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAAAAGTAATTTCAAAATGCTTTAAATAAATGTAATTATTATATATG  150

seq1  ACCATACTGTTATAGAGGATTACTTTGGGAAGAATCTCTAATAATGAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATACTGTTATAGAGGATTACTTTGGGAAGAATCTCTAATAATGAGAC  200

seq1  TGAAGTTTCTTCTCCTAGGAAAGCAAGTTATTTCATGATTCCTGATGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTTTCTTCTCCTAGGAAAGCAAGTTATTTCATGATTCCTGATGCCT  250

seq1  GCCTTTAACTTCTATTTTTACTAACTGAAGAGAACAGCATCAGAGATGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTAACTTCTATTTTTACTAACTGAAGAGAACAGCATCAGAGATGTA  300

seq1  GGTTAAAATAAGATAAAATACTCTCAGAAAAACAAACTAATGAAGCTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAAATAAGATAAAATACTCTCAGAAAAACAAACTAATGAAGCTCAT  350

seq1  GTTTTATGTTAGTGAGATATATGTTTTGTCATGTCACAGAAAGTACTAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATGTTAGTGAGATATATGTTTTGTCATGTCACAGAAAGTACTAGT  400

seq1  GCCACTATGTAATAAAGTGATGTAAACCAAGAAGTTCTATGGTCCAGCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTATGTAATAAAGTGATGTAAACCAAGAAGTTCTATGGTCCAGCAT  450

seq1  TTGCTAAAGACACTTTATTGTTGTTGTTTTTTCTTTGTTTGTCTGCTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAAAGACACTTTATTGTTGTTGTTTTTTCTTTGTTTGTCTGCTATT  500

seq1  ATTATTATTATTATTATTATTATTCCTTTTCTGTTTTTCTTTTGGTTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTATTATTATTATTATTATTCCTTTTCTGTTTTTCTTTTGGTTGTT  550

seq1  TGATACTTTTCCCTGGCCTATTAATCCAATCTCTTTCCATGAAGTTCAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACTTTTCCCTGGCCTATTAATCCAATCTCTTTCCATGAAGTTCAGA  600

seq1  CCAAGGCTCAGGTGTATAC-TTAAAACATATTG-TTTATTTTATTTTATT  648
      ||||||||||||||||||| ||||||||||||| ||||||||||||||||
seq2  CCAAGGCTCAGGTGTATACTTTAAAACATATTGTTTTATTTTATTTTATT  650

seq1  ATTTTTTAAGGGACGATAATCAGTAATATAAAC-TTTTTTGA-CCACAAA  696
      ||||||||||||||||||||||||||||||||| |||||||| |||||||
seq2  ATTTTTTAAGGGACGATAATCAGTAATATAAACTTTTTTTGACCCACAAA  700

seq1  ATGTGAAATTAAAACAAAACACCATGTTCCC-TTAGGGTCTTCC-TTTTT  744
      ||||||||||||||||||||||||||||||| |||||||||||| |||||
seq2  ATGTGAAATTAAAACAAAACACCATGTTCCCTTTAGGGTCTTCCTTTTTT  750

seq1  GAGATCTTTTCAATCTACTTGTTGCAAATACTGTTTAGGGATGAG-AGCA  793
      || |||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GAAATCTTTTCAATCTACTTGTTGCAAATACTGTTTAGGGATGAGAAGCA  800

seq1  CTTTACATGCAAATCCTGATCTTCATTGTAGCAATATTAATATCAAAAGA  843
      |||||||||| |||||||||| ||| || ||||||| ||||||| |||||
seq2  CTTTACATGC-AATCCTGATC-TCA-TGGAGCAATA-TAATATC-AAAGA  845

seq1  CAAGTCTTTGTCTAATCTGAAAGCTAATGGAAACAGGTGTGTCACTGTAT  893
      |||||||||| |||||||||||||||||||||||||  | |||| |||||
seq2  CAAGTCTTTG-CTAATCTGAAAGCTAATGGAAACAGTGGGGTCA-TGTAT  893

seq1  TCCTTCCAATGTGCACAACAAAATGTCATGGGTTAGTGTGTAAACAACAG  943
      ||||||| |||||| ||   ||||||||| ||||||||||| ||||||||
seq2  TCCTTCC-ATGTGC-CA--CAAATGTCAT-GGTTAGTGTGT-AACAACAG  937

seq1  ATGGTTATTTTTTCATTTTT  963
      ||||||| ||||||||||||
seq2  ATGGTTA-TTTTTCATTTTT  956

seq1: chr1_28270182_28270505
seq2: B6Ng01-050A24.g_81_405 (reverse)

seq1  AATTTGAAACCAGTT-TACAATACATGAGACCCTGCCTCAGTCAAAAAAA  49
      |||||||| ||||||  |||||||||||||||||||||||||||||||||
seq2  AATTTGAATCCAGTTAAACAATACATGAGACCCTGCCTCAGTCAAAAAAA  50

seq1  TATCATAAATAGAATTCTTGCTGATGATGTCATGGAAATTAGAGTTCTGA  99
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TATCATAAATAGAATTCTTGCTGAAGATGTCATGGAAATTAGAGTTCTGA  100

seq1  AACAACATTTCAGTTCATGTTTCACTACCATATTAGCTATATCACATGAC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACATTTCAGTTCATGTTTCACTACCATATTAGCTATATCACATGAC  150

seq1  ATATAAATTTTATATTTATGGACTTAGGTATCCATTCAGCTAACTTGGAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAATTTTATATTTATGGACTTAGGTATCCATTCAGCTAACTTGGAT  200

seq1  ATTAACATTATAACATACCTCTAAAGATACTAAAGACACTAAATACTTAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACATTATAACATACCTCTAAAGATACTAAAGACACTAAATACTTAA  250

seq1  TTTCAAAAACACCCAAATCGTTAACTGAACTTGGATTCACACAGTTGCCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAAACACCCAAATCGTTAACTGAACTTGGATTCACACAGTTGCCT  300

seq1  ATGTAGATATTATTTTCTCCAAAAC  324
      |||||||||||||||||||||||||
seq2  ATGTAGATATTATTTTCTCCAAAAC  325