BAC Information

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BAC

Clone NameB6Ng01-050E01
Chromosome1 (Build37)
Map Location 149,600,874 - 149,601,841
singlet/doubletsinglet
Overlap genenone
Upstream geneB830045N13Rik
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050E01.bB6Ng01-050E01.g
ACCDH874256DH874257
length9661,006
definitionDH874256|Mus musculus domesticus DNA, BAC clone: B6Ng01-050E01, 5' end.DH874257|Mus musculus domesticus DNA, BAC clone: B6Ng01-050E01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagttgaatacaagtttagagttaaaaacaacatgtgtaagcaaa
aactatcttaaaacatggaaatacatagcaggcaacgtcctaactgggta
tttataaataacatgctgaaacaaaacatattaagcatgtttgtgtgatg
taatgtatgctaccattacaacaaatgtattatattattctgtgcttctt
ggaggaaaagcacagaatttcagcaaaatagtatggaaagtatttagaaa
tctcatcctcccataaataaataaataaataaatgataataatgaaaatt
tattttttgaggtctaaagtcacaaaccttgtgagtttttgttatttaga
acagaatgactattatcacaagaatgagagtccctttgcttggtggttta
gtacctgggagctctgggggtgctgtttagttcacattgttgtttctcct
atggccttcaactccttcagttctttctctagctgcttcattggggaccc
tgtgctcagtccaatagatgactgtgagcatccatttctgtatttgtcag
gcagtgtcagatcctctctggagacaactgtatcttgctcagagcagcaa
gctgttgttggcatccacaatagtgtctgggtttggtgattgtatatggg
acggatccccaggtggggtagtctttgcgtgggctttacttcagtctctg
ctccacaattttgtctctgtaactccttctatgggtattttgttccccct
tctaaaaggatcgaagtatccacactttggtcttccttcttattgagttt
catgtggtttgttaatgtattgagtctcagcctgcatatatagcagagga
tggccttgtttgacttcaatgggaggagaagcccttgatctctgaagctc
ctattccacagtaatgggaatgccagggcaggaaacagcatagtggttgc
aagcaggggagggagg
gaattcagatgttaataaatgaaaatatctttggctgttagtgtgcaaaa
ctggaaaaccaaaactctgatcatttagatgagactcaatatcaaattga
gacatatctcggtgttagtgtacgttctcaacatacaaggatacctgagt
ttcatctacaacactggagagaacaaaagttcatttgaagatcaacaaaa
gacaaagagctaagctagtgatgttctccataagataatgtgcaaaaaac
tccaacatgcatattggcagctgatataactcctgggaggtagaaggcca
gtagattaccacccagccattcacaacctgggttcaatgtctggagatgc
tggagatgatagcccagcctttcacctcttgtgatgaccaactcagaggg
gcatcattctttcatcttggctgtttttcaccatgctatgtaagaattac
ctccactgtttcaacagcaaagtagcagtcctatccaagactgaacttca
aacaggagcatcctgatgaatctgagagagaaatctggattatccaagaa
caaataaaaaaatatagacttttaacagagttactgtttgtttactgtat
gggtgtgtgatggttagtagccccaattgaattttatgtatgggtttaaa
ctatagtttgttttattgtattgttatctcccttatgtttttgactttta
aaatctacattttagtatagtttccctaacaaattgacttttcataaaat
acttaagataattgttcattgacttttaaaactctaatgtttaaaccttt
atcttagaactttattcattagtcttcaatttttctactccctacaaagt
aattttcctctacattttttataccttataatggaggtatatattaattt
tccacacctcccactctataagccatatttgtacagtatattttttctct
gctaatcaaatccttcctaatttcactgcatacatcttgttactgtgtgt
gataaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_149600874_149601841
seq2: B6Ng01-050E01.g_69_1057

seq1  GAATTCAGATGTTAATAAATGAAAATATCTTTGGCTGTTAGTGTGCAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATGTTAATAAATGAAAATATCTTTGGCTGTTAGTGTGCAAAA  50

seq1  CTGGAAAACCAAAACTCTGATCATTTAGATGAGACTCAATATCAAATTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAAACCAAAACTCTGATCATTTAGATGAGACTCAATATCAAATTGA  100

seq1  GACATATCTCGGTGTTAGTGTACGTTCTCAACATACAAGGATACCTGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATATCTCGGTGTTAGTGTACGTTCTCAACATACAAGGATACCTGAGT  150

seq1  TTCATCTACAACACTGGAGAGAACAAAAGTTCATTTGAAGATCAACAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTACAACACTGGAGAGAACAAAAGTTCATTTGAAGATCAACAAAA  200

seq1  GACAAAGAGCTAAGCTAGTGATGTTCTCCATAAGATAATGTGCAAAAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAGAGCTAAGCTAGTGATGTTCTCCATAAGATAATGTGCAAAAAAC  250

seq1  TCCAACATGCATATTGGCAGCTGATATAACTCCTGGGAGGTAGAAGGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACATGCATATTGGCAGCTGATATAACTCCTGGGAGGTAGAAGGCCA  300

seq1  GTAGATTACCACCCAGCCATTCACAACCTGGGTTCAATGTCTGGAGATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATTACCACCCAGCCATTCACAACCTGGGTTCAATGTCTGGAGATGC  350

seq1  TGGAGATGATAGCCCAGCCTTTCACCTCTTGTGATGACCAACTCAGAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGATGATAGCCCAGCCTTTCACCTCTTGTGATGACCAACTCAGAGGG  400

seq1  GCATCATTCTTTCATCTTGGCTGTTTTTCACCATGCTATGTAAGAATTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCATTCTTTCATCTTGGCTGTTTTTCACCATGCTATGTAAGAATTAC  450

seq1  CTCCACTGTTTCAACAGCAAAGTAGCAGTCCTATCCAAGACTGAACTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACTGTTTCAACAGCAAAGTAGCAGTCCTATCCAAGACTGAACTTCA  500

seq1  AACAGGAGCATCCTGATGAATCTGAGAGAGAAATCTGGATTATCCAAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGAGCATCCTGATGAATCTGAGAGAGAAATCTGGATTATCCAAGAA  550

seq1  CAAATAAAAAAATATAGAC-TTTAACAGAGTTACTGTTTGTTTACTGTAT  599
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CAAATAAAAAAATATAGACTTTTAACAGAGTTACTGTTTGTTTACTGTAT  600

seq1  GGGTGTGTGATGGTTAGTAG-CCCAATTGAATTTTATGTATGGTTTAAAT  648
      |||||||||||||||||||| |||||||||||||||||||||| || || 
seq2  GGGTGTGTGATGGTTAGTAGCCCCAATTGAATTTTATGTATGGGTTTAAA  650

seq1  CTATAGTTTGTTTTATTGTATTGTTATCT-CCTTATG-TTTTGACTTTTA  696
      ||||||||||||||||||||||||||||| ||||||| ||||||||||||
seq2  CTATAGTTTGTTTTATTGTATTGTTATCTCCCTTATGTTTTTGACTTTTA  700

seq1  AAATCTACATTTTAGTATAGTTTCCCT-ACAAATTGACTTTTCAT-AAAT  744
      ||||||||||||||||||||||||||| ||||||||||||||||| ||||
seq2  AAATCTACATTTTAGTATAGTTTCCCTAACAAATTGACTTTTCATAAAAT  750

seq1  ACTTAAGAT-ATTGTTCATTGAC-TTTAAGACTCT-ATGTTTTAACCTTT  791
      ||||||||| ||||||||||||| ||||| ||||| |||||| |||||||
seq2  ACTTAAGATAATTGTTCATTGACTTTTAAAACTCTAATGTTTAAACCTTT  800

seq1  ATCTTAGAACTTTA-TCATTAGTC-TCAATTTTTCTACT-CCTAC-AAGT  837
      |||||||||||||| ||||||||| |||||||||||||| ||||| ||||
seq2  ATCTTAGAACTTTATTCATTAGTCTTCAATTTTTCTACTCCCTACAAAGT  850

seq1  AATTTT-CTCTACA-TTTTTATACC-TAT-ATGGA-GTATATATT-ATTT  881
      |||||| ||||||| |||||||||| ||| ||||| ||||||||| ||||
seq2  AATTTTCCTCTACATTTTTTATACCTTATAATGGAGGTATATATTAATTT  900

seq1  TCCACACCT-CCACTCTAT-AGCCATATTTGTACAGTATA-TTTTTCTCT  928
      ||||||||| ||||||||| |||||||||||||||||||| |||||||||
seq2  TCCACACCTCCCACTCTATAAGCCATATTTGTACAGTATATTTTTTCTCT  950

seq1  GCTTATTCAAATCCTTCCTAATTTCACTGCATACATCTTG  968
      || || ||||||||||||||||||||||||||||||||||
seq2  GC-TAATCAAATCCTTCCTAATTTCACTGCATACATCTTG  989