BAC Information

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BAC

Clone NameB6Ng01-050O08
Chromosome1 (Build37)
Map Location 70,131,320 - 70,132,217
singlet/doubletsinglet
Overlap geneSpag16
Upstream geneErbb4, LOC667842, EG241084, Ikzf2
Downstream geneA830006F12Rik, LOC100043210, EG667884, EG666083, LOC100042804, LOC100042809, Bard1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050O08.bB6Ng01-050O08.g
ACCDH874705DH874706
length733898
definitionDH874705|Mus musculus domesticus DNA, BAC clone: B6Ng01-050O08, 5' end.DH874706|Mus musculus domesticus DNA, BAC clone: B6Ng01-050O08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcagcagaggaatttctgatgactgggaactaaagatatgttca
atgtccttagccaccagggaaatgtaaattaaaacaactctaagattcca
tctaacatgcatcagaatggctaagataaaacgtttaagtaatagtacat
actggtgaggctatggaacaaggggaacactcctcccttgctggtggaat
gcaaacttttacaaccacttcggaaatcaatttgctggcttctcagaaaa
ttcagaatagttctagctcaagacccagctacaccactcctgggcatata
tccaaaagatgtcccattatgctactgggacacttgctcaactatcttca
tagcagctctattcttaatagccagaagctagaaacaacctagtgtccct
caacataagaatggatagagagaaaatgtggtacatctacataatggggt
actcttcagctattgaaaagaaagacatcatgaaattttcaggcaaatgg
atggaaccatttctgggtctgagtgaggtaactcagacccagaaagacat
gtatggtatgtacacacttagaattgggaactagctataaagtgcaggat
aaccatgctacaatccagagacccagagaatctggttaataatgattgcc
caagggaggatatgtgaatctcactccgaaggggaaactaaatagtcaga
ggtagatggagggagggcagtgggtgggagaga

gaattcaccggtcagggcaaatccttatgaatatgaaaagggaacaggac
tttcagcaaactgaaacaagcatggtgaattaaggcatagagtccatggt
gaagagcagaaaggaatggcccctcttctactaaacacaatagcacggag
aaaccatgcaaccacaaaacacacgctagtttattgaatcctctcccaaa
tcagtggcagatatagtcagacccttctgaagaaggcaagcatcttacag
tttacgttggaatgtgtatgtgaatagctgagaatgggagacacccaaaa
agttgtgaacccctgctttaattcaccaaacattgcactaatcaaactaa
ttggctacagggtaaaagttcatgagtccttagtacaaggaaagctttga
aacccaaaacaactgacgggcttaggagcatgactgaaactttctggaca
tctagcacttgcttctgaatcaaaatgctccataatgctccatggtttca
ggaaaccaaggccctcccttggctaagtgtgaatgaagaactaagggata
gcaacactaagcttcaactaatcagaactaaagttttagaaatgtgctgt
gaaacgtgcaaccatttgtgtccagggttcatttctcttctgtgcatcgg
atggattcattattgctggagccttcctcactaactccacgtctgcagga
tcactctacacactggatcatgggctaacacattatctgtgctatggaag
aactccaaggaattgtccaggttactttacacccccccctccccccgaat
aaaaatttatgtggtttcctcctgctccccggactctgtagatgtaactc
ccattcccccagttccaaataccaaatccctattgggtaagttgccca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_70131320_70132217
seq2: B6Ng01-050O08.g_69_966 (reverse)

seq1  TGGGCAACTTAAACCAACAGGGATTTGGTATTTGGAACATGGAGGAAT-G  49
      |||||||||| | |||| |||||||||||||||||||| ||| ||||| |
seq2  TGGGCAACTT-ACCCAATAGGGATTTGGTATTTGGAAC-TGGGGGAATGG  48

seq1  GAGTTACATCT-CAGAGTCTGGGAAGCAGGAGGAAACCACATATAATATC  98
      ||||||||||| ||||||| ||| ||||||||||||||||||| ||| | 
seq2  GAGTTACATCTACAGAGTCCGGGGAGCAGGAGGAAACCACATA-AATTTT  97

seq1  TAATCGGGGGG-GGGGGGGGTGTAAAGTAAACTGGACAATTCCTAGGAGT  147
      || |||||||| |||||||||||||||||| ||||||||||||| |||||
seq2  TATTCGGGGGGAGGGGGGGGTGTAAAGTAACCTGGACAATTCCTTGGAGT  147

seq1  TCTTCCATAGCACAGATAATGTGTTAGCCCCTGATCCAGTGTGTAGAGTG  197
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TCTTCCATAGCACAGATAATGTGTTAGCCCATGATCCAGTGTGTAGAGTG  197

seq1  ATCCTGCAGACGTGGAGTTAGTGAGGAAGGCTCCAGCAATAATGAAACCA  247
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATCCTGCAGACGTGGAGTTAGTGAGGAAGGCTCCAGCAATAATGAATCCA  247

seq1  TCCGATGCACAGAAGAGAAATGAACCCTGGACACAAATGGTTGCACGTTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGATGCACAGAAGAGAAATGAACCCTGGACACAAATGGTTGCACGTTT  297

seq1  CACAGCACATTTCTAAAACCTTAGTTTTGATTGGTTGAAGCTTAGTGTTG  347
      ||||||||||||||||||| |||||| ||||| |||||||||||||||||
seq2  CACAGCACATTTCTAAAACTTTAGTTCTGATTAGTTGAAGCTTAGTGTTG  347

seq1  CTATCCCTTAGTTCTTCATTCACACTTAGCCAAGGGAGGGCCTTGGTTTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCCTTAGTTCTTCATTCACACTTAGCCAAGGGAGGGCCTTGGTTTC  397

seq1  CTGAAACCATGGAGCATTCTGGAGCATTTTGATTCAGAAGCAAGTGCTAG  447
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CTGAAACCATGGAGCATTATGGAGCATTTTGATTCAGAAGCAAGTGCTAG  447

seq1  ATGTCCAGAAAGTTTCAGTCATGCTCCTAAGCCCGTCAGTTGTTTTGGGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCAGAAAGTTTCAGTCATGCTCCTAAGCCCGTCAGTTGTTTTGGGT  497

seq1  TTCAAAGCTTTCCTTGTACTAAGGACTCATGAACTTTTACCCTGTAGCCA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGCTTTCCTTGTACTAAGGACTCATGAACTTTTACCCTGTAGCCA  547

seq1  ATTAGTTTGATTAGTGCAATGTTTGGTGAATTAAAGCAGGGGTTCACAAC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTTTGATTAGTGCAATGTTTGGTGAATTAAAGCAGGGGTTCACAAC  597

seq1  TTTTTGGGTGTCTCCCATTCTCAGCTATTCACATACACATTCCAACGTAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGGTGTCTCCCATTCTCAGCTATTCACATACACATTCCAACGTAA  647

seq1  ACTGTAAGATGCTTGCCTTCTTCAGAAGGGTCTGACTATATCTGCCACTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAAGATGCTTGCCTTCTTCAGAAGGGTCTGACTATATCTGCCACTG  697

seq1  ATTTGGGAGAGGATTCAATAAACTAGCGTGTGTTTTGTGGTTGCATGGTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGGAGAGGATTCAATAAACTAGCGTGTGTTTTGTGGTTGCATGGTT  747

seq1  TCTCCGTGCTATTGTGTTTAGTAGAAGAGGGGCCATTCCTTTCTGCTCTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCGTGCTATTGTGTTTAGTAGAAGAGGGGCCATTCCTTTCTGCTCTT  797

seq1  CACCATGGACTCTATGCCTTAATTCACCATGCTTGCTTCAGTTTGCTGAA  847
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CACCATGGACTCTATGCCTTAATTCACCATGCTTGTTTCAGTTTGCTGAA  847

seq1  AGTCCTGTTCCCTTTTCATATTCATAAGGATTTGCCCTGACCTGTGAATT  897
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AGTCCTGTTCCCTTTTCATATTCATAAGGATTTGCCCTGACCGGTGAATT  897

seq1  C  898
      |
seq2  C  898


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