BAC Information

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BAC

Clone NameB6Ng01-051F14
Chromosome1 (Build37)
Map Location 130,970,128 - 131,119,690
singlet/doubletdoublet
Overlap geneLOC100042732
Upstream geneZranb3, EG666784, R3hdm1, LOC667109, LOC100042111, Ubxd2, Lct, Mcm6, Dars, LOC620659, Cxcr4
Downstream geneThsd7b, LOC100042745, LOC100042740
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051F14.bB6Ng01-051F14.g
ACCDH875020DH875021
length1,0831,023
definitionDH875020|Mus musculus domesticus DNA, BAC clone: B6Ng01-051F14, 5' end.DH875021|Mus musculus domesticus DNA, BAC clone: B6Ng01-051F14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(131,118,603 - 131,119,690)(130,970,128 - 130,971,156)
sequence
gaattcttggcacccaacctccctcccccatctaaaaaaccagcaagtgg
aatcacttcccaacttttccccagtgatgacattaactggagaaggttct
acacatctgaatatcctgtgattaaagtgagaccatctggataagctcaa
gtaaccctattccaaggtttatactctaaatccctttaacagtggaagcc
agtatcttgaaggttcaatggattggggtaagaggacatcctgtggctat
gggtaacagagagcttttgtttattcttactaccgagagagagagagaga
gagagagagagagagagagagagagagagctctaacatctttgcctgcct
tcaactgcattactgaagcagaaacacctcaccaacaaactgtagtacag
gttgatctcttttggggtgtcattaactcttagggcacttgaagtgctca
gcaagaggcatattctgcttaagcgaatcccttgttttaaaacatcagat
gttttcagtcatcagttgaggaatgtgttaagccttgagtgtggtctcag
tacatcaaacactgttcaaagcgtgaaatcagagagaggaatcagtgaat
gtgtctctggcagatcagacaaactttgacaagaatttgggaagatagaa
gctaaaggaaaaagcaaggagtgataaaggattttgacagtgagtgacag
cactcccctgagactaagacaagatgtaaagatgaaaacagtatcagaaa
aatgaaaatttataaagtgcaaatatacccatactttaaaataggttgat
aatatcaaaactttaccagcagttcttatctcccttctgtgttctcaagg
caaaattatatatgattttaaaacatttattttatcatttctctctgtgt
gtgcttgagtgcacatatgtgtgccaatgatacctgcagagactagaaaa
cgcttggggtcctctggatctagaaactcaagtggctttgatctgcctgt
tgtgagtattggataaaacttggggtcctgtaaaacaatatatgtttctt
atgactgagccaactccccagactaatatattt
gaattccaggcacacattttatatatggaacttttaaaaagtagaatttg
actgctggtccaagaaagttttcatccccatttattgtcttttatttata
ttgctttggttatccatgaaacatgctagtttttttaattattattacat
tggttttacttctctctaatgtcttagtaccgtttagtcaattctcccaa
gcaccaatccatagaggagtcctctgttctctttaaagtataaagagatt
aactcacctaatatcatgcaacttgtaaatagtatcatcaagattcataa
tcaaatctgatagaatacataaaaacatgccctttctataatgcattcac
tgtttttctgaaccatgtctgtctgtaaatatgcctcttggataaatggc
ctccatgctggccatgaaaagccttggtttctaacaatgctatttgagat
gagtgtgtggtggtccctgaaaaggagacactaggaccacatgttctcta
tattccaagggagagcaataaactctcatcgcatgccattcctgctgagt
ttatctggtcttgtttaagcaaccacacagcatccataaagatttttctc
cacagtgtgctcctgtaaataagaagtttatcaaataaaaccttccacaa
agagcaagaagacatgccctattgacagcctctcactgagtgctggttcc
tttcaggatcctggtgaggaaaattcacctcttgttcaataactgcattt
attggaagtcttcaagtttaagtagcttggggttgaatttgggtatccat
tttatttgaacaatcccagtcttccaatttcatcatgaggaataagttcc
ttggaattcagtaatgtactgtagaacatgatacacacccatttccctag
gcttttctgtaattatctttgggagataaatcacacacacatgagatgca
aggttattggatgagtgtatggtatttatttgtctggcatttggggaggt
tatgacttaaatttccttattga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_131118603_131119690
seq2: B6Ng01-051F14.b_45_1127 (reverse)

seq1  AAATATATTAGTCTGGGGAGTTGGCTCAGTCATTAAGAACATATATTGTT  50
      ||||||||||||||||||||||||||||||||| |  |||||||||||||
seq2  AAATATATTAGTCTGGGGAGTTGGCTCAGTCATAAGAAACATATATTGTT  50

seq1  TTACAGAGACCCCAAGTTTTTATCCCAATACTCACAACAGGCAGATCAAA  100
      |||||| ||||||||| |||||| ||||||||||||||||||||||||||
seq2  TTACAG-GACCCCAAG-TTTTAT-CCAATACTCACAACAGGCAGATCAAA  97

seq1  GCCACTTGAGTTTCTAGATCCAGAGGACCCCAAGCGTTCTTCTAGTCTCT  150
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GCCACTTGAGTTTCTAGATCCAGAGGACCCCAAGCGTT-TTCTAGTCTCT  146

seq1  GCAGGTATCATTGGCACACATATGTGCACTCAAGCACACACAGAGAGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTATCATTGGCACACATATGTGCACTCAAGCACACACAGAGAGAAA  196

seq1  TGATAAAATAAATGTTTTTAAAAATCATATATAATTTTGCCTTGAGAACA  250
      ||||||||||||||||||  ||||||||||||||||||||||||||||||
seq2  TGATAAAATAAATGTTTT--AAAATCATATATAATTTTGCCTTGAGAACA  244

seq1  CAGAAGGGAGATAAGAACTGCTGGTAAAGTTTTGATATTATCAACCTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGGAGATAAGAACTGCTGGTAAAGTTTTGATATTATCAACCTATT  294

seq1  TT-AAGTATGGGTATATTTGCACTTTATAAATTTTCATTTTTCTGATACT  349
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTATGGGTATATTTGCACTTTATAAATTTTCATTTTTCTGATACT  344

seq1  GTTTTCATCTTTACATCTTGTCTTAGTCTCAGGGGAGTGCTGTCACTCAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCATCTTTACATCTTGTCTTAGTCTCAGGGGAGTGCTGTCACTCAC  394

seq1  TGTCAAAATCCTTTATCACTCCTTGCTTTTTCCTTTAGCTTCTATCTTCC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAAATCCTTTATCACTCCTTGCTTTTTCCTTTAGCTTCTATCTTCC  444

seq1  CAAATTCTTGTCAAAGTTTGTCTGATCTGCCAGAGACACATTCACTGATT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTCTTGTCAAAGTTTGTCTGATCTGCCAGAGACACATTCACTGATT  494

seq1  CCTCTCTCTGATTTCACGCTTTGAACAGTGTTTGATGTACTGAGACCACA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTCTGATTTCACGCTTTGAACAGTGTTTGATGTACTGAGACCACA  544

seq1  CTCAAGGCTTAACACATTCCTCAACTGATGACTGAAAACATCTGATGTTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGGCTTAACACATTCCTCAACTGATGACTGAAAACATCTGATGTTT  594

seq1  TAAAACAAGGGATTCGCTTAAGCAGAATATGCCTCTTGCTGAGCACTTCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAAGGGATTCGCTTAAGCAGAATATGCCTCTTGCTGAGCACTTCA  644

seq1  AGTGCCCTAAGAGTTAATGACACCCCAAAAGAGATCAACCTGTACTACAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCCTAAGAGTTAATGACACCCCAAAAGAGATCAACCTGTACTACAG  694

seq1  TTTGTTGGTGAGGTGTTTCTGCTTCAGTAATGCAGTTGAAGGCAGGCAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGGTGAGGTGTTTCTGCTTCAGTAATGCAGTTGAAGGCAGGCAAA  744

seq1  GATGTTAGAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTAGAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  794

seq1  CTCTCGGTAGTAAGAATAAACAAAAGCTCTCTGTTACCCATAGCCACAGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCGGTAGTAAGAATAAACAAAAGCTCTCTGTTACCCATAGCCACAGG  844

seq1  ATGTCCTCTTACCCCAATCCATTGAACCTTCAAGATACTGGCTTCCACTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCTCTTACCCCAATCCATTGAACCTTCAAGATACTGGCTTCCACTG  894

seq1  TTAAAGGGATTTAGAGTATAAACCTTGGAATAGGGTTACTTGAGCTTATC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGGGATTTAGAGTATAAACCTTGGAATAGGGTTACTTGAGCTTATC  944

seq1  CAGATGGTCTCACTTTAATCACAGGATATTCAGATGTGTAGAACCTTCTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGGTCTCACTTTAATCACAGGATATTCAGATGTGTAGAACCTTCTC  994

seq1  CAGTTAATGTCATCACTGGGGAAAAGTTGGGAAGTGATTCCACTTGCTGG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTAATGTCATCACTGGGGAAAAGTTGGGAAGTGATTCCACTTGCTGG  1044

seq1  TTTTTTAGATGGGGGAGGGAGGTTGGGTGCCAAGAATTC  1088
      |||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAGATGGGGGAGGGAGGTTGGGTGCCAAGAATTC  1083

seq1: chr1_130970128_130971156
seq2: B6Ng01-051F14.g_68_1090

seq1  GAATTCCAGGCACACATTTTATATATGGAACTTTTAAAAAGTAGAATTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGCACACATTTTATATATGGAACTTTTAAAAAGTAGAATTTG  50

seq1  ACTGCTGGTCCAAGAAAGTTTTCATCCCCATTTATTGTCTTTTATTTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTGGTCCAAGAAAGTTTTCATCCCCATTTATTGTCTTTTATTTATA  100

seq1  TTGCTTTGGTTATCCATGAAACATGCTAGTTTTTTTAATTATTATTACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTGGTTATCCATGAAACATGCTAGTTTTTTTAATTATTATTACAT  150

seq1  TGGTTTTACTTCTCTCTAATGTCTTAGTACCGTTTAGTCAATTCTCCCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTACTTCTCTCTAATGTCTTAGTACCGTTTAGTCAATTCTCCCAA  200

seq1  GCACCAATCCATAGAGGAGTCCTCTGTTCTCTTTAAAGTATAAAGAGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCAATCCATAGAGGAGTCCTCTGTTCTCTTTAAAGTATAAAGAGATT  250

seq1  AACTCACCTAATATCATGCAACTTGTAAATAGTATCATCAAGATTCATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCACCTAATATCATGCAACTTGTAAATAGTATCATCAAGATTCATAA  300

seq1  TCAAATCTGATAGAATACATAAAAACATGCCCTTTCTATAATGCATTCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATCTGATAGAATACATAAAAACATGCCCTTTCTATAATGCATTCAC  350

seq1  TGTTTTTCTGAACCATGTCTGTCTGTAAATATGCCTCTTGGATAAATGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTCTGAACCATGTCTGTCTGTAAATATGCCTCTTGGATAAATGGC  400

seq1  CTCCATGCTGGCCATGAAAAGCCTTGGTTTCTAACAATGCTATTTGAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATGCTGGCCATGAAAAGCCTTGGTTTCTAACAATGCTATTTGAGAT  450

seq1  GAGTGTGTGGTGGTCCCTGAAAAGGAGACACTAGGACCACATGTTCTCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTGTGGTGGTCCCTGAAAAGGAGACACTAGGACCACATGTTCTCTA  500

seq1  TATTCCAAGGGAGAGCAATAAACTCTCATCGCATGCCATTCCTGCTGAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCAAGGGAGAGCAATAAACTCTCATCGCATGCCATTCCTGCTGAGT  550

seq1  TTATCTGGTCTTGTTTAAGCAACCACACAGCATCCATAAAGATTTTTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTGGTCTTGTTTAAGCAACCACACAGCATCCATAAAGATTTTTCTC  600

seq1  CACAGTGTGCTCCTGTAAATAAGAAGTTTATCAAATAAAACCTTCCACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTGTGCTCCTGTAAATAAGAAGTTTATCAAATAAAACCTTCCACAA  650

seq1  AGAGCAAGAAGACATGCCCTATTGACAGCCTCTCACTGAGTGCTGGTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAAGAAGACATGCCCTATTGACAGCCTCTCACTGAGTGCTGGTTCC  700

seq1  TTTCAGGATCCTGGTGAGGAAAATTCACCTCTTGTTCAATAACTGCATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGGATCCTGGTGAGGAAAATTCACCTCTTGTTCAATAACTGCATTT  750

seq1  ATTGGAAGTCTTCAAGTTTAAGTAGCTTGGGGTTGAATTTGGGTATCCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ATTGGAAGTCTTCAAGTTTAAGTAGCTTGGGGTTGAATTTGGGTATCCAT  800

seq1  TTTATTTGAACAATCCCAGTCTTCCAATTTCATCATGAGGAATAAGTTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTGAACAATCCCAGTCTTCCAATTTCATCATGAGGAATAAGTTCC  850

seq1  TTGGAATTCAGTAATGTACTGTAGAACATGATACACAACCCATTTCCCTA  900
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTGGAATTCAGTAATGTACTGTAGAACATGATACAC-ACCCATTTCCCTA  899

seq1  GGCTTTTCTGTAATTATCTTTGGGAGATAAATCACACACACATGAGAAGG  950
      |||||||||||||||||||||||||||||||||||||||||||||| | |
seq2  GGCTTTTCTGTAATTATCTTTGGGAGATAAATCACACACACATGAG-ATG  948

seq1  CAAGGTTATTGGATGAGTGTTATGGTATTTATTTGTCCTGGCATTTGGGG  1000
      ||||||||||||||||||| |||||||||||||||| |||||||||||||
seq2  CAAGGTTATTGGATGAGTG-TATGGTATTTATTTGT-CTGGCATTTGGGG  996

seq1  AGGTAATGACTATAAAATTCACTTATTGA  1029
      |||| |||||| |||| ||| ||||||||
seq2  AGGTTATGACT-TAAATTTC-CTTATTGA  1023