BAC Information

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BAC

Clone NameB6Ng01-051H17
Chromosome1 (Build37)
Map Location 32,140,899 - 32,142,105
singlet/doubletsinglet
Overlap genenone
Upstream gene4931428L18Rik, LOC666020, Gluld1, 4930521A18Rik, EG226957, EG624262, LOC624275, LOC666056, LOC100041238
Downstream geneKhdrbs2, EG408191
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051H17.bB6Ng01-051H17.g
ACCDH875111DH875112
length1,2011,286
definitionDH875111|Mus musculus domesticus DNA, BAC clone: B6Ng01-051H17, 5' end.DH875112|Mus musculus domesticus DNA, BAC clone: B6Ng01-051H17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtgagattactattgatatacgatccttctctaaacacaaatt
gatgtatcctcactcatgcctccaacagaagtaatctatttatatcacag
cctagttcaatactttcaaaggatttaaatatttacaaaatgtacttaat
gaaaacagctagttattccaattaacttcctgttaaacatgaataatggt
ttgtttccaaccttctgtgttaagatggtggaaattacttcattcattta
tttgtttatcagccaataaatgtcaaatagataccacttatattgtatgg
ctctacccttgaagttaaaacaacaaaacttctaggctgtgataaaaact
gtatttgtaaagtgactgccatgcaagagtaagaacatgagtccaatccc
aagaattaatgtaaaaaaagctagttgtcttggtgcatgcctattaatcc
agggctaggaaggcaagtactttcacatccctgggggcttgttgcctagc
cagcctaacttaatcatcaagcttcaagccagtgtaaagatctgcctcat
aaaacaaggtcaagatagtatgtgaagacaatacccaaggttgacggggc
ttctgacatgcatccgtatataatgatcataaacacacacacacacacac
acacacacacacacacacacacacacacacacacacacactataccttcc
acagtataccctttccaagaataataaaaatgataccttcctgaaatcaa
atacataatgggctagttgaaaatagagggcatatcaactgtcctcatta
atttctagtaattctttgacataacaatgataatcataccatacccttta
ccatagcattggttttataagtttagctcatcttgtgagtgtatcatatt
catagaggttaaggagtgcagtgataatgacaatgctactaatatggtta
ctgatgcaaggagcaagttcaagacactaatatatgttaatgtggtaaat
cctcttgcatctctctgaagtagatgatgtcatacccacaccctaaagaa
cgaaaacctaagtgatatagagatgcttctatctcctcccagttacactg
aagtatagatagatcagggaaaacctaattttcctgggttctgaatccat
tatcagacaggattctaagttgccactaaggtcaagtgtaatggtgtggt
t
gaattccagttttatgtttgttgccaaattctttacaaaatgaagtaaaa
tttttgctagaataggatagcgtgttatctgtcttaataagtttgggcaa
tcccatgtcattaaaggcttgtaggcagtgatcaattacatttttggagg
cttctccagtatgcagagaagcaaaaagaaatcctgaacaagtgtcaata
caaacatgtatatattttaactttccaaattctgcataatgagttacatc
catttgccaaatatgattaggcataaaacctcgtggattaactcctaaat
gtggcactggagataatgtaatttatttaggacattgttttacaatcatt
cttgcctactccttagtgatcttatgtcggagccttaaggtatggctaga
gagatgaaatttttcatgatcacgtttggccaaagcaacgggatctgaaa
ttaaggcttctcctattagagctctgttgatgcaatcattgccttcagct
aaaggtccaggaagaccagaatgagatcttatgtggccaatatagaatgg
gtattttggggcaagaatgatgttttgtaattgtgaaaacagggatcctg
ctggcgtattaaagttaaacataccacaggtctccaataagggtaccgat
tgtgcaacatataaactatcagtaaaaatattaaaagcctcatccacaga
ctgaaagacattcagtactgctgttaattctgctaattgagctgagaggc
caggagtctttatcattacctgtttattatttataggaaatccagctcgc
cctttagaggagccatcagtaaacaccagaacagcattgtgtaagggttg
taaagaggtcatattaggaaatatcacctcatgtacattcaaaaatttta
tcaacctatctgagggtagtggctgtctatagtttgttaaacccctattt
gagcaagcaaccaatactgtgctgtttccacccaagtgtcttgacccaat
aagctgaacgatattatatggcctctttgccaaaaatagttaatgcctgc
ttccctccaaggataaatatctcggagctactgccttcataaatggccag
atttttatgtttaggagaaagtcctgaatttataccaatatggagagaga
ctctttgctcttaccattcctgtggctctctgagactcgtgtaaattacc
gaccgtagcctatgagatccatataaaaggtgacaaatgcctcctcagac
tcatttatctgcacgctacttgtgtggaccggccga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_32140899_32142105
seq2: B6Ng01-051H17.b_39_1239 (reverse)

seq1  AACCACACCATTCACA-TTGACCTTTATGTGCAAACTTTAGACTCCTGGT  49
      |||||||||||| ||| ||||||||  || ||||   ||||| |||| ||
seq2  AACCACACCATT-ACACTTGACCTTAGTG-GCAA--CTTAGAATCCT-GT  45

seq1  CTGATTATGAACTCCAGAA-CCAGGAAATTTAGTTTTTTCCTTGATCTAT  98
      ||||| ||| | | ||||| |||||||| ||||  |||||| ||||||||
seq2  CTGATAATGGA-TTCAGAACCCAGGAAAATTAG-GTTTTCCCTGATCTAT  93

seq1  CTATACTTTCAGTGTTAACTGGGA-GAGATTAGAGCATCTCTATATCACT  147
      |||||| ||||||| ||||||||| |||||   |||||||||||||||||
seq2  CTATAC-TTCAGTG-TAACTGGGAGGAGATAGAAGCATCTCTATATCACT  141

seq1  TAGGTTTTCTGTCTTTAGGTTGTGGGTATGACATCATCTACTTCAGAGAG  197
      |||||||||  |||||||| ||||||||||||||||||||||||||||||
seq2  TAGGTTTTCGTTCTTTAGGGTGTGGGTATGACATCATCTACTTCAGAGAG  191

seq1  ATGC-AGAGGATTTACCACATTAACATATATTAGTGTCTTGAACTTGCTC  246
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAGAGGATTTACCACATTAACATATATTAGTGTCTTGAACTTGCTC  241

seq1  CTTGCATCAGTAACCATTATTAGTAGCATTGTCATTATCACTGCACTCCT  296
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CTTGCATCAGTAACCA-TATTAGTAGCATTGTCATTATCACTGCACTCCT  290

seq1  TAACCTCTATGAATATGATACACTCACAAGATGAGCTAAACTTATAAAAC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTCTATGAATATGATACACTCACAAGATGAGCTAAACTTATAAAAC  340

seq1  CAATGCTATGGTAAAGGGTATGGTATGATTATCATTGTTATGTCAAAGAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCTATGGTAAAGGGTATGGTATGATTATCATTGTTATGTCAAAGAA  390

seq1  TTACTAGAAATTAATGAGGACAGTTGATATGCCCTCTATTTTCAACTAGC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAGAAATTAATGAGGACAGTTGATATGCCCTCTATTTTCAACTAGC  440

seq1  CCATTATGTATTTGATTTCAGGAAGGTATCATTTTTATTATTCTTGGAAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTATGTATTTGATTTCAGGAAGGTATCATTTTTATTATTCTTGGAAA  490

seq1  GGGTATACTGTGGAAGGTATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATACTGTGGAAGGTATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  540

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTATGATCATTATATACGGAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTATGATCATTATATACGGAT  590

seq1  GCATGTCAGAAGCCCCGTCAACCTTGGGTATTGTCTTCACATACTATCTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTCAGAAGCCCCGTCAACCTTGGGTATTGTCTTCACATACTATCTT  640

seq1  GACCTTGTTTTATGAGGCAGATCTTTACACTGGCTTGAAGCTTGATGATT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTGTTTTATGAGGCAGATCTTTACACTGGCTTGAAGCTTGATGATT  690

seq1  AAGTTAGGCTGGCTAGGCAACAAGCCCCCAGGGATGTGAAAGTACTTGCC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAGGCTGGCTAGGCAACAAGCCCCCAGGGATGTGAAAGTACTTGCC  740

seq1  TTCCTAGCCCTGGATTAATAGGCATGCACCAAGACAACTAGCTTTTTTTA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAGCCCTGGATTAATAGGCATGCACCAAGACAACTAGCTTTTTTTA  790

seq1  CATTAATTCTTGGGATTGGACTCATGTTCTTACTCTTGCATGGCAGTCAC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAATTCTTGGGATTGGACTCATGTTCTTACTCTTGCATGGCAGTCAC  840

seq1  TTTACAAATACAGTTTTTATCACAGCCTAGAAGTTTTGTTGTTTTAACTT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAAATACAGTTTTTATCACAGCCTAGAAGTTTTGTTGTTTTAACTT  890

seq1  CAAGGGTAGAGCCATACAATATAAGTGGTATCTATTTGACATTTATTGGC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGTAGAGCCATACAATATAAGTGGTATCTATTTGACATTTATTGGC  940

seq1  TGATAAACAAATAAATGAATGAAGTAATTTCCACCATCTTAACACAGAAG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAACAAATAAATGAATGAAGTAATTTCCACCATCTTAACACAGAAG  990

seq1  GTTGGAAACAAACCATTATTCATGTTTAACAGGAAGTTAATTGGAATAAC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGAAACAAACCATTATTCATGTTTAACAGGAAGTTAATTGGAATAAC  1040

seq1  TAGCTGTTTTCATTAAGTACATTTTGTAAATATTTAAATCCTTTGAAAGT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGTTTTCATTAAGTACATTTTGTAAATATTTAAATCCTTTGAAAGT  1090

seq1  ATTGAACTAGGCTGTGATATAAATAGATTACTTCTGTTGGAGGCATGAGT  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAACTAGGCTGTGATATAAATAGATTACTTCTGTTGGAGGCATGAGT  1140

seq1  GAGGATACATCAATTTGTGTTTAGAGAAGGATCGTATATCAATAGTAATC  1196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATACATCAATTTGTGTTTAGAGAAGGATCGTATATCAATAGTAATC  1190

seq1  TCACTGAATTC  1207
      |||||||||||
seq2  TCACTGAATTC  1201