BAC Information

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BAC

Clone NameB6Ng01-051K04
Chromosome1 (Build37)
Map Location 44,100,832 - 44,256,814
singlet/doubletdoublet
Overlap geneEG666713, 1700029F09Rik, Kdelc1, Bivm, Ercc5
Upstream geneTgfbrap1, AI597479, Fhl2, EG666642, EG666644, LOC100041644, Nck2, 1500015O10Rik, Uxs1, LOC666676, LOC100042303, EG666690, Tpp2, A530098C11Rik
Downstream gene4832428D23Rik, LOC435619, Txn-ps1, Gulp1, LOC100041738, LOC100041752, LOC383640
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051K04.bB6Ng01-051K04.g
ACCDH875218DH875219
length8181,096
definitionDH875218|Mus musculus domesticus DNA, BAC clone: B6Ng01-051K04, 5' end.DH875219|Mus musculus domesticus DNA, BAC clone: B6Ng01-051K04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(44,100,832 - 44,101,649)(44,255,686 - 44,256,814)
sequence
gaattctgtgaaactagatgttccttgatgtaatggttcttaaacaatta
aaaaattgaggcatagggaaacagcacagcacagtcctaatggcccaggt
gtatgttgcgtgttctcatcttggaaacaacgtaataactgcagaatggt
agttgcagattaatgcttgctttgcaaagaaagtttaaagaaatattaga
aaattaaatagagccaacattgggaccccaagaaagaaaaaaaaaactat
tgaagtcatgaaataagttttgcacaacatttgagagtggtttctggata
agcaagtataggatatgtaaagtcttatattagtaaaactaagttaaaac
actgagactcttaggagagccattgtatgtaatgtgcagaagcagaaagc
tagcagaactactgagttaagggttaacttgattccttctggccactgcc
tggcagctttacctatgtcgtttatcattagaacttcacaagaaaatgca
aggaactggcctcagagctctgagctctgaagtataagttaaaatttaaa
taatgataactttgcaattattattattttggctatagacctggaaatag
ggaagcttgaaactttggggaacaactgtaattcttgattctttgtggga
catggttattcttttgaatttgatttggcaatgattatacaatgtctttt
tctacctgcttttggagtatcaataaaagactgagcaagaaaaaggcgag
cgagcatgagaagagaatgtgaacagtgagtgaggagagaatgtgaagag
tgagtgaggagggaatgt
gaattcactaccagggatgagtgaaggtgactgagcagcatcctgggcaa
aggagctggaggatgaaggcataaaggagaaaggacgggttccagcagca
cgccagccttgtgtgcagtgctgtaaaagcagagaagagtgacctgcttg
gattactcatttgaagaactgtcacatctactaacctgtactgaatgata
actgtcatcagtggaattcatactgctttagggtctgggttagaaattac
ccacgtagttccttttctaggatccctaaaggcattcgtctaatgtacat
gataaagcgtggagacccagtgggcacgggcatcttccctagagttacat
agatgtcaccgcttggatgggaactctgacctttgctgtcctgaagcttg
tgttcttttcttgcactctgcaggaaaatctgaatttggattgcctccct
attaatcggctaccagttaaatgaagaatattgtgtttgcctgtctcctg
agaacaaattagcttgagacatacctggaaagacgagcctcctccccata
tgaaagagcatgcatatgacatggatgtatagatccagcaacgagtctaa
acagaaaatacatttctgtttgcaaagaatatggggcacttggaataatc
aatttaaagaaatatgaggatctttttttttctaccgcccctcctctctc
ctcgaccccccccccccccccctttcacgggcttctcggacagaacagac
acaaacgggggaaaaaaaaaaaaaaaaaaaacacgcagcctggatgcacg
ccagggaacggaagcgctgccgccaactcagaagcgggcacctagggggc
aaaaccctggatcgctccatagcacctggaggcttgcaaagcagagcaca
tgcacactccagacgggagggtatgcatcgcacaccaccagccactttcc
cactcgggaagaggtcaagcgagacacgaccgagtgaccacgtaaggaca
ccgacgcctgaccgcccacgagacccgccgaccactgcagagtgcgccgg
gtcaagcttgggcgacagcccaccctgcttccacgccacgcatacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_44100832_44101649
seq2: B6Ng01-051K04.b_48_865

seq1  GAATTCTGTGAAACTAGATGTTCCTTGATGTAATGGTTCTTAAACAATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGAAACTAGATGTTCCTTGATGTAATGGTTCTTAAACAATTA  50

seq1  AAAAATTGAGGCATAGGGAAACAGCACAGCACAGTCCTAATGGCCCAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTGAGGCATAGGGAAACAGCACAGCACAGTCCTAATGGCCCAGGT  100

seq1  GTATGTTGCGTGTTCTCATCTTGGAAACAACGTAATAACTGCAGAATGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTTGCGTGTTCTCATCTTGGAAACAACGTAATAACTGCAGAATGGT  150

seq1  AGTTGCAGATTAATGCTTGCTTTGCAAAGAAAGTTTAAAGAAATATTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCAGATTAATGCTTGCTTTGCAAAGAAAGTTTAAAGAAATATTAGA  200

seq1  AAATTAAATAGAGCCAACATTGGGACCCCAAGAAAGAAAAAAAAAACTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAAATAGAGCCAACATTGGGACCCCAAGAAAGAAAAAAAAAACTAT  250

seq1  TGAAGTCATGAAATAAGTTTTGCACAACATTTGAGAGTGGTTTCTGGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTCATGAAATAAGTTTTGCACAACATTTGAGAGTGGTTTCTGGATA  300

seq1  AGCAAGTATAGGATATGTAAAGTCTTATATTAGTAAAACTAAGTTAAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGTATAGGATATGTAAAGTCTTATATTAGTAAAACTAAGTTAAAAC  350

seq1  ACTGAGACTCTTAGGAGAGCCATTGTATGTAATGTGCAGAAGCAGAAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGACTCTTAGGAGAGCCATTGTATGTAATGTGCAGAAGCAGAAAGC  400

seq1  TAGCAGAACTACTGAGTTAAGGGTTAACTTGATTCCTTCTGGCCACTGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGAACTACTGAGTTAAGGGTTAACTTGATTCCTTCTGGCCACTGCC  450

seq1  TGGCAGCTTTACCTATGTCGTTTATCATTAGAACTTCACAAGAAAATGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGCTTTACCTATGTCGTTTATCATTAGAACTTCACAAGAAAATGCA  500

seq1  AGGAACTGGCCTCAGAGCTCTGAGCTCTGAAGTATAAGTTAAAATTTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACTGGCCTCAGAGCTCTGAGCTCTGAAGTATAAGTTAAAATTTAAA  550

seq1  TAATGATAACTTTGCAATTATTATTATTTTGGCTATAGACCTGGAAATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGATAACTTTGCAATTATTATTATTTTGGCTATAGACCTGGAAATAG  600

seq1  GGAAGCTTGAAACTTTGGGGAACAACTGTAATTCTTGATTCTTTGTGGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCTTGAAACTTTGGGGAACAACTGTAATTCTTGATTCTTTGTGGGA  650

seq1  CATGGTTATTCTTTTGAATTTGATTTGGCAATGATTATACAATGTCTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTTATTCTTTTGAATTTGATTTGGCAATGATTATACAATGTCTTTT  700

seq1  TCTACCTGCTTTTGGAGTATCAATAAAAGACTGAGCAAGAAAAAGGCGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCTGCTTTTGGAGTATCAATAAAAGACTGAGCAAGAAAAAGGCGAG  750

seq1  CGAGCATGAGAAGAGAATGTGAACAGTGAGTGAGGAGAGAATGTGAAGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGCATGAGAAGAGAATGTGAACAGTGAGTGAGGAGAGAATGTGAAGAG  800

seq1  TGAGTGAGGAGGGAATGT  818
      ||||||||||||||||||
seq2  TGAGTGAGGAGGGAATGT  818

seq1: chr1_44255686_44256814
seq2: B6Ng01-051K04.g_65_1160 (reverse)

seq1  CGTATGCCGGTGGTGCGTGGAAGGCAGGGGTGCGGCTGTCCGGCCCCAGC  50
      |||||||  |||  |||||||| ||| ||||| |||||||  |||| |||
seq2  CGTATGC--GTG--GCGTGGAA-GCA-GGGTG-GGCTGTC--GCCCAAGC  41

seq1  GCTGACCCGCGCGCACTTCTTGCAGTGGTTCGCGTGGTCCTCGTGGGCGT  100
        ||||||| |||||||   |||||||||  ||| ||| |||||||||| 
seq2  -TTGACCCG-GCGCACT--CTGCAGTGGTCGGCG-GGT-CTCGTGGGCG-  84

seq1  GTCAGGCGCTCGGTTGTCCTTTACGTGGTTCACTTCGGTCGTGTCTCGCT  150
      |||||||| |||| ||||| |||||||| |||| ||||||||||||||||
seq2  GTCAGGCG-TCGG-TGTCC-TTACGTGG-TCAC-TCGGTCGTGTCTCGCT  129

seq1  TGACCCTCTTCCCCGAGGTGGGGAATGTGGCTGGTGGTGTTGCGGTTGCA  200
      ||| |||||| ||||||   ||||| ||||||||||||| ||| | ||||
seq2  TGA-CCTCTT-CCCGAG--TGGGAAAGTGGCTGGTGGTG-TGC-GATGCA  173

seq1  TACCCTTCCCGTCTGGTGTGTGCATGTGCTCTGCTTTTTGCAAGCCTCCA  250
      ||||| |||||||||| |||||||||||||||||  ||||||||||||||
seq2  TACCC-TCCCGTCTGGAGTGTGCATGTGCTCTGC--TTTGCAAGCCTCCA  220

seq1  GGTGCTACTGGAGCGATCCA-GGTTTTGCCCCCTAGGTGCCCGCTTCTGA  299
      ||||||| |||||||||||| |||||||||||||||||||||||||||||
seq2  GGTGCTA-TGGAGCGATCCAGGGTTTTGCCCCCTAGGTGCCCGCTTCTGA  269

seq1  GTTGGCGGCAGCGCTTCCGTTCCCTGGCGTGCATCCAGGCTGCGTGTTTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||    
seq2  GTTGGCGGCAGCGCTTCCGTTCCCTGGCGTGCATCCAGGCTGCGTG----  315

seq1  TTTTTTTTTTTTTTTTTTTTCCCCCGTTTGTGTCTGTTCTGTCCGAGAAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTTTTCCCCCGTTTGTGTCTGTTCTGTCCGAGAAG  365

seq1  CCCGTGAAA-GGGGGGGGGGGGGGGGTCGAGGAGAGAGGAGGGGCGGTAG  448
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTGAAAGGGGGGGGGGGGGGGGGTCGAGGAGAGAGGAGGGGCGGTAG  415

seq1  AAAAAAAAAGATCCTCATATTTCTTTAAATTGATTATTCCAAGTGCCCCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAGATCCTCATATTTCTTTAAATTGATTATTCCAAGTGCCCCA  465

seq1  TATTCTTTGCAAACAGAAATGTATTTTCTGTTTAGACTCGTTGCTGGATC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTTGCAAACAGAAATGTATTTTCTGTTTAGACTCGTTGCTGGATC  515

seq1  TATACATCCATGTCATATGCATGCTCTTTCATATGGGGAGGAGGCTCGTC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACATCCATGTCATATGCATGCTCTTTCATATGGGGAGGAGGCTCGTC  565

seq1  TTTCCAGGTATGTCTCAAGCTAATTTGTTCTCAGGAGACAGGCAAACACA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGGTATGTCTCAAGCTAATTTGTTCTCAGGAGACAGGCAAACACA  615

seq1  ATATTCTTCATTTAACTGGTAGCCGATTAATAGGGAGGCAATCCAAATTC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTTCATTTAACTGGTAGCCGATTAATAGGGAGGCAATCCAAATTC  665

seq1  AGATTTTCCTGCAGAGTGCAAGAAAAGAACACAAGCTTCAGGACAGCAAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTCCTGCAGAGTGCAAGAAAAGAACACAAGCTTCAGGACAGCAAA  715

seq1  GGTCAGAGTTCCCATCCAAGCGGTGACATCTATGTAACTCTAGGGAAGAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGAGTTCCCATCCAAGCGGTGACATCTATGTAACTCTAGGGAAGAT  765

seq1  GCCCGTGCCCACTGGGTCTCCACGCTTTATCATGTACATTAGACGAATGC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCGTGCCCACTGGGTCTCCACGCTTTATCATGTACATTAGACGAATGC  815

seq1  CTTTAGGGATCCTAGAAAAGGAACTACGTGGGTAATTTCTAACCCAGACC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGGGATCCTAGAAAAGGAACTACGTGGGTAATTTCTAACCCAGACC  865

seq1  CTAAAGCAGTATGAATTCCACTGATGACAGTTATCATTCAGTACAGGTTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGCAGTATGAATTCCACTGATGACAGTTATCATTCAGTACAGGTTA  915

seq1  GTAGATGTGACAGTTCTTCAAATGAGTAATCCAAGCAGGTCACTCTTCTC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATGTGACAGTTCTTCAAATGAGTAATCCAAGCAGGTCACTCTTCTC  965

seq1  TGCTTTTACAGCACTGCACACAAGGCTGGCGTGCTGCTGGAACCCGTCCT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTACAGCACTGCACACAAGGCTGGCGTGCTGCTGGAACCCGTCCT  1015

seq1  TTCTCCTTTATGCCTTCATCCTCCAGCTCCTTTGCCCAGGATGCTGCTCA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTTTATGCCTTCATCCTCCAGCTCCTTTGCCCAGGATGCTGCTCA  1065

seq1  GTCACCTTCACTCATCCCTGGTAGTGAATTC  1129
      |||||||||||||||||||||||||||||||
seq2  GTCACCTTCACTCATCCCTGGTAGTGAATTC  1096