BAC Information

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BAC

Clone NameB6Ng01-052H15
Chromosome1 (Build37)
Map Location 126,843,051 - 126,843,910
singlet/doubletsinglet
Overlap genenone
Upstream geneDpp10, LOC666998
Downstream geneActr3, Slc35f5, Lypd1, E030049G20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-052H15.bB6Ng01-052H15.g
ACCDH875823DH875824
length1,156869
definitionDH875823|Mus musculus domesticus DNA, BAC clone: B6Ng01-052H15, 5' end.DH875824|Mus musculus domesticus DNA, BAC clone: B6Ng01-052H15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtaccccacttttaatatagggtatttgaat
ttctggagtccagcttcttgagttctttgtatatattggatattagtccc
ctatcagatttaggtttgataaaaatcctttcccaatctgttggtggctt
tcttgtcttattgagagtgtcttttgccttatagaagctttacaatttta
tgaggtcccatttgtcaattctcaatcttacagcacaagccattgctgtt
ctgtttaggaatttttcccctgtgtccatatcttcaagggttttcaccat
tttctcctctataaatttcagtgtctctggttttatgtggaggtctttga
tccactcagacttgagctttgtacaaggaaataagattggatcaatttgc
attcttttacatgataatcaccagttgtgccaacaccatttgttgaaaat
gttgtcttttttccactggatggttttagctcccttgtcaaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctatttcattga
tttacctgtctgtcactgtatcagtaccatgcagtttttaccacaattgc
tctgtagtacagcttaatgttgggcatggtaattccactagatgttcttt
tattgttgagaatagtttttgctatcctaggttttttattattccagatg
aatttgcaaattgccctttttatatcagtgaagaattgagttggaatttt
gatggggattgtattgaatctgtagattgcttttgtcaggatagccattt
ttattatattaatcctgccaatccataagcatgggagatctttccatctt
ctgagatcttcttcaatttctttcttcagagactggaagttcttatcata
cagatctttcacttcctcagttagagtcacaccaaaggtattttaatatt
attgtgactattgtgaaggtttttgtttccctaatttctttctcagtccg
tttatcctttgtgtagagaaggcattgatttgtttgagttaatttttata
tccacctactgcctgaagctgttatacaagttatggttcccggcgagatt
tgaggcacttatattacctactatctcctgcaataggtaattttgaactc
ttcctt
gaattcccttcccaaatgctggattgttttcataatttccatcagtcttt
actttttgttgtcctgtgtatcacttgagcatttattatcaagttcttgt
tcattctctttaagttactaagctgcttctttgagtcttggagtcttctt
tgaattcctggaattacatgatgaagttatgattgctctttcaaattttg
tgtcctggagttcatttattcattaatagatatttctgcatgactgctga
gagtattggtggatatacatttatcatttatattatttacatgttagaat
gggagctaggtatgtggacttcttcattagttctgtgtctggtatggaca
gagcaggttggggcaccagacagtctgtacatgctgggttgagtgtaagg
attggatatggctcagttgtattgaagtcagggggacatagagaacttcg
ctggtgagcaggatatttatcctggatcaagcctagagtatggggtagat
cttagtgttggggaagatatatgctgaatcaggaattctgatctcgctag
acaaggagaatgatgtgcaggatctggtagggtagaaaggttagatgtag
catgggtaaggtctgtcaatcatgggcaggcaaggcatgtcctgtcagaa
gcctagaggttggtcgggatgcaggtagtggtggccagagtaggccaggg
cattggatgtgagatgtagtctggatctcaggagggtgcttggaaagaag
actttggaatgactcatctaaactagaccctagacaaggacatccacagg
gctgattttttaaagcaggtcacgtgagtggctaaaacaacctgaaaaga
ggacttttgttatctctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_126843051_126843910
seq2: B6Ng01-052H15.g_72_934

seq1  CCCTTCCCAAATGCTGGATTGTTTTCATAATTTCCATCAGTCTTTACTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCCCAAATGCTGGATTGTTTTCATAATTTCCATCAGTCTTTACTTT  50

seq1  TTGTTGTCCTGTGTATCACTTGAGCATTTATTATCAAGTTCTTGTTCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTCCTGTGTATCACTTGAGCATTTATTATCAAGTTCTTGTTCATT  100

seq1  CTCTTTAAGTTACTAAGCTGCTTCTTTGAGTCTTGGAGTCTTCTTTGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTAAGTTACTAAGCTGCTTCTTTGAGTCTTGGAGTCTTCTTTGAAT  150

seq1  TCCTGGAATTACATGATGAAGTTATGATTGCTCTTTCAAATTTTGTGTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGAATTACATGATGAAGTTATGATTGCTCTTTCAAATTTTGTGTCC  200

seq1  TGGAGTTCATTTATTCATTAATAGATATTTCTGCATGACTGCTGAGAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTTCATTTATTCATTAATAGATATTTCTGCATGACTGCTGAGAGTA  250

seq1  TTGGTGGATATACATTTATCATTTATATTATTTACATGTTAGAATGGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGGATATACATTTATCATTTATATTATTTACATGTTAGAATGGGAG  300

seq1  CTAGGTATGTGGACTTCTTCATTAGTTCTGTGTCTGGTATGGACAGAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTATGTGGACTTCTTCATTAGTTCTGTGTCTGGTATGGACAGAGCA  350

seq1  GGTTGGGGCACCAGACAGTCTGTACATGCTGGGTTGAGTGTAAGGATTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGGGCACCAGACAGTCTGTACATGCTGGGTTGAGTGTAAGGATTGG  400

seq1  ATATGGCTCAGTTGTATTGAAGTCAGGGGGACATAGAGAACTTCGCTGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGCTCAGTTGTATTGAAGTCAGGGGGACATAGAGAACTTCGCTGGT  450

seq1  GAGCAGGATATTTATCCTGGATCAAGCCTAGAGTATGGGGTAGATCTTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGGATATTTATCCTGGATCAAGCCTAGAGTATGGGGTAGATCTTAG  500

seq1  TGTTGGGGAAGATATATGCTGAATCAGGAATTCTGATCTCGCTAGACAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGGGAAGATATATGCTGAATCAGGAATTCTGATCTCGCTAGACAAG  550

seq1  GAGAATGATGTGCAGGATCTGGTAGGGTAGAAAGGTTAGATGTAGCATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATGATGTGCAGGATCTGGTAGGGTAGAAAGGTTAGATGTAGCATGG  600

seq1  GTAAGGTCTGTCAATCATGGGCAGGCAAGGCATGTCCTGTCAGAAGCCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGTCTGTCAATCATGGGCAGGCAAGGCATGTCCTGTCAGAAGCCTA  650

seq1  GAGGTTGGTCGGGATGCAGGTAGTGGTGGCCAGAGTAGGCCAGGGCATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTGGTCGGGATGCAGGTAGTGGTGGCCAGAGTAGGCCAGGGCATTG  700

seq1  GATGTGAGATGTAGTCTGGATCTCAGGAGGGTGCTTGGAAAGAAGAC-TT  749
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GATGTGAGATGTAGTCTGGATCTCAGGAGGGTGCTTGGAAAGAAGACTTT  750

seq1  GGAATGACTCATCT-AACTAGACCCTAGACAAGGACATCCACA-GGCTGA  797
      |||||||||||||| |||||||||||||||||||||||||||| ||||||
seq2  GGAATGACTCATCTAAACTAGACCCTAGACAAGGACATCCACAGGGCTGA  800

seq1  -TTTTTAAAGCAGGTCACGTGAGTGGCTAAAACAACCTGAAAAGAGGACT  846
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAAAGCAGGTCACGTGAGTGGCTAAAACAACCTGAAAAGAGGACT  850

seq1  TTTGTTATTCTCTC  860
      ||||||| ||||||
seq2  TTTGTTA-TCTCTC  863