BAC Information

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BAC

Clone NameB6Ng01-052P10
Chromosome10 (Build37)1 (Build37)
Map Location 104,054,119 - 104,054,36381,735,355 - 81,736,379
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-052P10.bB6Ng01-052P10.g
ACCDH876160DH876161
length7521,018
definitionDH876160|Mus musculus domesticus DNA, BAC clone: B6Ng01-052P10, 5' end.DH876161|Mus musculus domesticus DNA, BAC clone: B6Ng01-052P10, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,054,119 - 104,054,363)(81,735,355 - 81,736,379)
sequence
gaattctcaactgaggaataccgaatggctgagaaacacctgaaaaaatg
ttcagcatccttaatcaacagggaaatgcaaatcaaaacagccctgagat
tccatctcataccagtcagaatggctaagttcaaaaattcaggtgacagc
agatgctgtctaggatgtggagaaagaggaatactcctccactgttggtg
ggattgcaagcttgtacaaccactctgtaaatcagtctggtggtttcttt
gtttgtttatctgatgatcaacctgcttcctccctggacatatagcaaaa
tatctctatatggtaacagttatttgaaaacatgtttattatggctcaat
tcacaacagccatgagtagaatcaaactatatgtttataaactgatggaa
aatggaggaaatgtaatataactacataatggaatattactcagctgtga
agaaaaatgatatcatgaaagtttcagaaaatagatggaacttgaaaaat
tatagtaggtaagtttgctcaggcacagaaagacaaaaaaatatatgcac
tctctcatacatgattctttattttgagccttttgtttgtattgtatgtt
taacccagacaacatgtagaagtaagggatctagaaacaggccatgtaga
gtggactccttaacatgggtaatagtaaaatcagataaatgaagccatag
tgaaaaggttcagcatgagagatggagggggcaatgagtaagtgaaactc
at
tcctgaaattctgagttggttaacagcaaaaagaccccacatcacaaagc
tacacagtagatgtctctcatccactgttgcttttattttgttgagggca
aagtggcattgttaagacagttcatatacaatgaagatacatacagccaa
caaaataatgaatttgatcttcataaaaatttctcccagtgaaaataaaa
gtgggaaaattttaagtaatacaactatgggaaccgggctatacacaaag
agtaatttatttagtcacactgtggtgtcaaagaatctcagaaaacgaaa
tattttaggagtcagaaatggattcatttcacaccacagatgtaacaaac
atattccaaggaacatagtaacttcccccagacgttaatgattgccttta
gaaacatgaattcacaaagaaaaggaaaatcataatattttagtcaaaga
aggcatagtactatctcttagacatttattagctagatagttatttagat
agagagataactgcacatttaaaaaaccataaagggcatacggatgtcca
tggatgtttgattggaggacgcttcatgctgggattttaaaactgtattt
aaaagcaaatagtgagatagtaatttccaggacctttgcaggaaaccagt
agtaggaaaaacaggcattcccaggccatttgcacacataatcaatccat
ctttgccaggcttttgagtcccataaaacactcccttttgtgttttccat
tcaactggaatgaaaatttctattgagcctcattccagacgccccatgag
acagaggtacctttcagcactcggcacttcacagagtacgtccccatttg
aatgggagcacctcagagacatgttgtcagaaatgaggggttactgaatt
tcaccctgagagattccttctctgagacatcacattggacacctcttttt
cttcagtgatttccagcttctcttatactctatgttttttatgaggctga
attttacaggaaaaatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104054119_104054363
seq2: B6Ng01-052P10.b_47_291 (reverse)

seq1  AACCGCCAGACGGATTTCCAGAGTGGTTGTACAAGCCTGCAATCCCACCA  50
      |||| |||||| ||||| |||||||||||||||||| |||||||||||||
seq2  AACCACCAGACTGATTTACAGAGTGGTTGTACAAGCTTGCAATCCCACCA  50

seq1  ACAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCATCTGCTGT  100
      ||| ||||||||| |||||||||||||||||||| | |||||||||||||
seq2  ACAGTGGAGGAGTATTCCTCTTTCTCCACATCCTAGACAGCATCTGCTGT  100

seq1  CACCTGAATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTC  150
      ||||||||||||||| ||||||||||||||||||| |||| |||||||||
seq2  CACCTGAATTTTTGAACTTAGCCATTCTGACTGGTATGAGATGGAATCTC  150

seq1  AGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTTGAACATTT  200
      |||| |||||||||||||||||||||| |||||||||||| |||||||||
seq2  AGGGCTGTTTTGATTTGCATTTCCCTGTTGATTAAGGATGCTGAACATTT  200

seq1  TTTCAGGTGCTTCTCTGCCATTCGGTATTCCTCAGGTGAGAATTC  245
      ||||||||| ||||| ||||||||||||||||||| |||||||||
seq2  TTTCAGGTGTTTCTCAGCCATTCGGTATTCCTCAGTTGAGAATTC  245

seq1: chr1_81735355_81736379
seq2: B6Ng01-052P10.g_76_1093

seq1  TCCTGAAATTCTGAGTTGGTTAACAGCAAAAAGACCCCACATCACAAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAAATTCTGAGTTGGTTAACAGCAAAAAGACCCCACATCACAAAGC  50

seq1  TACACAGTAGATGTCTCTCATCCACTGTTGCTTTTATTTTGTTGAGGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGTAGATGTCTCTCATCCACTGTTGCTTTTATTTTGTTGAGGGCA  100

seq1  AAGTGGCATTGTTAAGACAGTTCATATACAATGAAGATACATACAGCCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGCATTGTTAAGACAGTTCATATACAATGAAGATACATACAGCCAA  150

seq1  CAAAATAATGAATTTGATCTTCATAAAAATTTCTCCCAGTGAAAATAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATAATGAATTTGATCTTCATAAAAATTTCTCCCAGTGAAAATAAAA  200

seq1  GTGGGAAAATTTTAAGTAATACAACTATGGGAACCGGGCTATACACAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGAAAATTTTAAGTAATACAACTATGGGAACCGGGCTATACACAAAG  250

seq1  AGTAATTTATTTAGTCACACTGTGGTGTCAAAGAATCTCAGAAAACGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATTTATTTAGTCACACTGTGGTGTCAAAGAATCTCAGAAAACGAAA  300

seq1  TATTTTAGGAGTCAGAAATGGATTCATTTCACACCACAGATGTAACAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAGGAGTCAGAAATGGATTCATTTCACACCACAGATGTAACAAAC  350

seq1  ATATTCCAAGGAACATAGTAACTTCCCCCAGACGTTAATGATTGCCTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCCAAGGAACATAGTAACTTCCCCCAGACGTTAATGATTGCCTTTA  400

seq1  GAAACATGAATTCACAAAGAAAAGGAAAATCATAATATTTTAGTCAAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACATGAATTCACAAAGAAAAGGAAAATCATAATATTTTAGTCAAAGA  450

seq1  AGGCATAGTACTATCTCTTAGACATTTATTAGCTAGATAGTTATTTAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATAGTACTATCTCTTAGACATTTATTAGCTAGATAGTTATTTAGAT  500

seq1  AGAGAGATAACTGCACATTTAAAAAACCATAAAGGGCATACGGATGTCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGATAACTGCACATTTAAAAAACCATAAAGGGCATACGGATGTCCA  550

seq1  TGGATGTTTGATTGGAGGACGCTTCATGCTGGGATTTTAAAACTGTATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGTTTGATTGGAGGACGCTTCATGCTGGGATTTTAAAACTGTATTT  600

seq1  AAAAGCAAATAGTGAGATAGTAATTTCCAGGACCTTTGCAGGAAACCAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCAAATAGTGAGATAGTAATTTCCAGGACCTTTGCAGGAAACCAGT  650

seq1  AGTAGGAAAAACAGGCATTCCCAGGCCATTTGCACACATAATCAATCCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGAAAAACAGGCATTCCCAGGCCATTTGCACACATAATCAATCCAT  700

seq1  CTTTGCCAGGCTTTTGAGTCCCATAAAACACTCCCTTTTGTGTTTTCCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCCAGGCTTTTGAGTCCCATAAAACACTCCCTTTTGTGTTTTCCAT  750

seq1  TCAACTGGAATGAAAATTTCTATTGAGCCTCATTCCAGACGCCCCATGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTGGAATGAAAATTTCTATTGAGCCTCATTCCAGACGCCCCATGAG  800

seq1  ACAGAGGTACCTTTCAGCACTCGGCACTTCACAGAGTACGTCCCCA-TTG  849
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ACAGAGGTACCTTTCAGCACTCGGCACTTCACAGAGTACGTCCCCATTTG  850

seq1  AATGGGAGCACCTCAAGAGACATG-TGTCAGAAATGAGGGGTTACTGAAT  898
      |||||||||||||| ||||||||| |||||||||||||||||||||||||
seq2  AATGGGAGCACCTC-AGAGACATGTTGTCAGAAATGAGGGGTTACTGAAT  899

seq1  TTCACCCTGAGAGATTTCCTTCTCTGAGACCATCACAATAGAACACCTCT  948
      |||||||||||||| |||||||||||||| |||||| || | ||||||||
seq2  TTCACCCTGAGAGA-TTCCTTCTCTGAGA-CATCAC-ATTGGACACCTCT  946

seq1  TTTATCTCAGGTGATTTCCAGCTTCTCTTATACCTCATATGTATTTTTAT  998
      ||| |||   |||||||||||||||||||||| ||| ||||| |||||||
seq2  TTT-TCTTCAGTGATTTCCAGCTTCTCTTATA-CTC-TATGT-TTTTTAT  992

seq1  GAGGCTTGATTTTTACAGGAAAAATAT  1025
      ||||| ||| |||||||||||||||||
seq2  GAGGC-TGAATTTTACAGGAAAAATAT  1018