BAC Information

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BAC

Clone NameB6Ng01-053C02
Chromosome1 (Build37)
Map Location 125,683,286 - 125,823,813
singlet/doubletdoublet
Overlap geneDpp10
Upstream geneLOC666983
Downstream geneLOC666998
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053C02.bB6Ng01-053C02.g
ACCDH876268DH876269
length1,0791,167
definitionDH876268|Mus musculus domesticus DNA, BAC clone: B6Ng01-053C02, 5' end.DH876269|Mus musculus domesticus DNA, BAC clone: B6Ng01-053C02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(125,822,716 - 125,823,813)(125,683,286 - 125,684,473)
sequence
gaattccagccacaaggcattcctttgtcagaggaaagccttttcatttc
cttgcctgcaagctgtaccacgctcagcagattaaagatcgattgctctc
agcaagcaaagagcaatgttaagttcatcaaccccctagctgcctctcat
tctgcttaagaagagaatagaaagtctccctctctgctgtcctgcacact
aggatctaagaatgaaaccgtagaaataaaacccaagaacaattaagctg
tagttcccaagtgtaattatattatggttgtttctgcttgctttatatcc
ctatatacaatttatgattcaagtattagtgggaatagactaatggcatg
tcataattaatgaagcgccttctctgttttttgtttcctttgtgcttcta
gtttgctttgttcaacagaataagatgtttatgttaatttttatgcatgc
tgtagttaggcttctatatattatttagggaagcttctacattagcacta
ataaataaactgttgggttttaaatcatggtctgtgcactacctagttta
tttatatttattcctttttcattactgcaggaggaaacagaagccgtgct
ttatttttataataaaacactctgagaagagttattatggaccctaacac
tcgtatgcaaacatcattaaagtttacacagcgaaggtttttaataacat
ttggagagattttggctgatgccttttctgtattaatatttccacatccg
gatacaatggctgaatattatcctcactaggaacctaggaaacccttgtg
ttatttgtaaatgaagacttgacagtgttttgccaaggtttctgtttgag
tatgcatagcaagacacatttctttcacattgtgatttaaagaatctttc
tgtgtcaggaactgatggagtttaaagtggaagaggtctgaaagttgaac
cagtattgactctttctatgtggtgactgcacagagtttgggatgaaata
tagtagtgtggaggatgaggtgagctgtgatttactgggtctcaaagtga
cgaaagataaaaaaggtatattattgggt
gaattcttcctacaggctgcctttggattcaggaccacaatacatttgct
tgccaaaatttataacttgctggcctccttcacactgctttttttaaaaa
aattatcctttatttatttagtgtgtgcttatgcacatgtgcatacatat
atgtgtcacggagtacacttaaagtcagaggagggcttttggaagttggc
ggtctccttccctctgtggttcccgagacccaaactcaggatgtcagact
cagtagcagatacttctctgctgagccatctcactggctatggtttgtca
tctactactccagtaagtagctcttgagcaatttttaaattcactgtgaa
tttttctccctctacttctctttctctccttccatcttcctccctttctc
tcctactgctgcacctatacaaagatatatgtgtatttgtacatagagaa
attagtatgcacactcatatattcaccctgcttcttctttcattagttgt
gctcatagagaacttgtcaaagaacaagttcgtgatgtttctggtgaact
tgcttgccacctcaccaaaaaaaaaagagaaagaaaaaaaaagtgtcacg
tgaggagatttctgagtatttatgagaaaatttcaagaaactgagagaag
agtatggtggcctcatttttttccaaaatatgaaattgttcttggattat
gccttccaagggatagcagataagagcaagtctatttcagattattcatt
acagctaactattattatttatttatatgcctctatagaaaaacatgttt
ttgcctcacatgtcttgtccttattcatgtgacttttctttaccctcaga
gtataaattttctgatgttcagagtaaactgcctattgcatgagacttgg
gttgcttcatttgtagactccattctcacaggtccaaccaccaagagtaa
cagtaaacacttgtcacttacaatgtctatatatagtagtcaatactctt
ttttttctcaaaaaagaaacaagaagaaaaggaagggcaaaaaaatctaa
acaaaaatcatagaagtcatgctggagtcgctgtacttccacaatcattt
caatatcatgggatctggcatctctattttcaaatttaactatggtctgc
tctacatgctaccctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_125822716_125823813
seq2: B6Ng01-053C02.b_50_1128 (reverse)

seq1  ACCTAATAATATACCTTTTTTTTTCCTTTTCTGTCATCTTTTTGCTACCA  50
      ||| |||||||||||||||       || ||| || ||  ||||  ||| 
seq2  ACCCAATAATATACCTTTT-------TTATCTTTCGTCACTTTGAGACC-  42

seq1  CAGTTAATCCACAGCTTCACCTCCTTCCTCCACACCTACTATATTTTCAT  100
      |||| ||| |||||| |||||| | ||||||||| |||||||| ||||| 
seq2  CAGTAAAT-CACAGC-TCACCT-CATCCTCCACA-CTACTATA-TTTCA-  86

seq1  TCCAAAACTCTGTTGCAGTCACCACATAGAAAGAGTCAATACTGGTTCAA  150
      ||| |||||||| |||||||||||||||||||||||||||||||||||||
seq2  TCCCAAACTCTG-TGCAGTCACCACATAGAAAGAGTCAATACTGGTTCAA  135

seq1  CTTTCAGACCTCTTTCCACTTTAAACTCCATCAGTTTCCTGACACAGAAA  200
      |||||||||||| ||||||||||||||||||||| |||||||||||||||
seq2  CTTTCAGACCTC-TTCCACTTTAAACTCCATCAG-TTCCTGACACAGAAA  183

seq1  GATTCTTTAAAATCACAATGTGAAAGAAATGTGTCTTGCTATGCATACCT  250
      |||||||| |||||||||||||||||||||||||||||||||||||| ||
seq2  GATTCTTT-AAATCACAATGTGAAAGAAATGTGTCTTGCTATGCATA-CT  231

seq1  CAAACAGAAACCTTGGCAAAACACTGTCAAGTCTTCATTTACAAATAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAGAAACCTTGGCAAAACACTGTCAAGTCTTCATTTACAAATAACA  281

seq1  CAAGGGTTTCCTAGGTTCCTAGTGAGGATAATATTCAGCCATTGTATCCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGTTTCCTAGGTTCCTAGTGAGGATAATATTCAGCCATTGTATCCG  331

seq1  GATGTGGAAATATTAATACAGAAAAGGCATCAGCCAAAATCTCTCCAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGGAAATATTAATACAGAAAAGGCATCAGCCAAAATCTCTCCAAAT  381

seq1  GTTATTAAAAACCTTCGCTGTGTAAACTTTAATGATGTTTGCATACGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTAAAAACCTTCGCTGTGTAAACTTTAATGATGTTTGCATACGAGT  431

seq1  GTTAGGGTCCATAATAACTCTTCTCAGAGTGTTTTATTATAAAAATAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGGTCCATAATAACTCTTCTCAGAGTGTTTTATTATAAAAATAAAG  481

seq1  CACGGCTTCTGTTTCCTCCTGCAGTAATGAAAAAGGAATAAATATAAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGCTTCTGTTTCCTCCTGCAGTAATGAAAAAGGAATAAATATAAATA  531

seq1  AACTAGGTAGTGCACAGACCATGATTTAAAACCCAACAGTTTATTTATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGGTAGTGCACAGACCATGATTTAAAACCCAACAGTTTATTTATTA  581

seq1  GTGCTAATGTAGAAGCTTCCCTAAATAATATATAGAAGCCTAACTACAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTAATGTAGAAGCTTCCCTAAATAATATATAGAAGCCTAACTACAGC  631

seq1  ATGCATAAAAATTAACATAAACATCTTATTCTGTTGAACAAAGCAAACTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATAAAAATTAACATAAACATCTTATTCTGTTGAACAAAGCAAACTA  681

seq1  GAAGCACAAAGGAAACAAAAAACAGAGAAGGCGCTTCATTAATTATGACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCACAAAGGAAACAAAAAACAGAGAAGGCGCTTCATTAATTATGACA  731

seq1  TGCCATTAGTCTATTCCCACTAATACTTGAATCATAAATTGTATATAGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATTAGTCTATTCCCACTAATACTTGAATCATAAATTGTATATAGGG  781

seq1  ATATAAAGCAAGCAGAAACAACCATAATATAATTACACTTGGGAACTACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAAGCAAGCAGAAACAACCATAATATAATTACACTTGGGAACTACA  831

seq1  GCTTAATTGTTCTTGGGTTTTATTTCTACGGTTTCATTCTTAGATCCTAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAATTGTTCTTGGGTTTTATTTCTACGGTTTCATTCTTAGATCCTAG  881

seq1  TGTGCAGGACAGCAGAGAGGGAGACTTTCTATTCTCTTCTTAAGCAGAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAGGACAGCAGAGAGGGAGACTTTCTATTCTCTTCTTAAGCAGAAT  931

seq1  GAGAGGCAGCTAGGGGGTTGATGAACTTAACATTGCTCTTTGCTTGCTGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGCAGCTAGGGGGTTGATGAACTTAACATTGCTCTTTGCTTGCTGA  981

seq1  GAGCAATCGATCTTTAATCTGCTGAGCGTGGTACAGCTTGCAGGCAAGGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAATCGATCTTTAATCTGCTGAGCGTGGTACAGCTTGCAGGCAAGGA  1031

seq1  AATGAAAAGGCTTTCCTCTGACAAAGGAATGCCTTGTGGCTGGAATTC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAAAGGCTTTCCTCTGACAAAGGAATGCCTTGTGGCTGGAATTC  1079

seq1: chr1_125683286_125684473
seq2: B6Ng01-053C02.g_65_1231

seq1  GAATTCTTCCTACAGGCTGCCTTTGGATTCAGGACCACAATACATTTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCTACAGGCTGCCTTTGGATTCAGGACCACAATACATTTGCT  50

seq1  TGCCAAAATTTATAACTTGCTGGCCTCCTTCACACTGCTTTTTTTAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAAATTTATAACTTGCTGGCCTCCTTCACACTGCTTTTTTTAAAAA  100

seq1  AATTATCCTTTATTTATTTAGTGTGTGCTTATGCACATGTGCATACATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATCCTTTATTTATTTAGTGTGTGCTTATGCACATGTGCATACATAT  150

seq1  ATGTGTCACGGAGTACACTTAAAGTCAGAGGAGGGCTTTTGGAAGTTGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTCACGGAGTACACTTAAAGTCAGAGGAGGGCTTTTGGAAGTTGGC  200

seq1  GGTCTCCTTCCCTCTGTGGTTCCCGAGACCCAAACTCAGGATGTCAGACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCCTTCCCTCTGTGGTTCCCGAGACCCAAACTCAGGATGTCAGACT  250

seq1  CAGTAGCAAATACTTCTCTGCTGAGCCATCTCACTGGCTATGGTTTGTCA  300
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGCAGATACTTCTCTGCTGAGCCATCTCACTGGCTATGGTTTGTCA  300

seq1  TCTACTACTCCAGTAAGTAGCTCTTGAGCAATTTTTAAATTCACTGTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTACTCCAGTAAGTAGCTCTTGAGCAATTTTTAAATTCACTGTGAA  350

seq1  TTTTTCTCCCTCTACTTCTCTTTCTCTCCTTCCATCTTCCTCCCTTTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTCCCTCTACTTCTCTTTCTCTCCTTCCATCTTCCTCCCTTTCTC  400

seq1  TCCTACTGCTGCACCTATACAAAGATATATGTGTATTTGTACATAGAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACTGCTGCACCTATACAAAGATATATGTGTATTTGTACATAGAGAA  450

seq1  ATTAGTATGCACACTCATATATTCACCCTGCTTCTTCTTTCATTAGTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTATGCACACTCATATATTCACCCTGCTTCTTCTTTCATTAGTTGT  500

seq1  GCTCATAGAGAACTTGTCAAAGAACAAGTTCGTGATGTTTCTGGTGAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATAGAGAACTTGTCAAAGAACAAGTTCGTGATGTTTCTGGTGAACT  550

seq1  TGCTTGCCACCTCACCAAAAAAAAAAGAGAAAGAAAAAAAAAGTGTCACG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGCCACCTCACCAAAAAAAAAAGAGAAAGAAAAAAAAAGTGTCACG  600

seq1  TGAGGAGATTTCTGAGTATTTATGAGAAAATTTCAAGAAACTGAGAGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAGATTTCTGAGTATTTATGAGAAAATTTCAAGAAACTGAGAGAAG  650

seq1  AGTATGGTGGCCTCATTTTTTTCCAAAATATGAAATTGTTCTTGGATTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGGTGGCCTCATTTTTTTCCAAAATATGAAATTGTTCTTGGATTAT  700

seq1  GCCTTCCAAGGGATAGCAGATAAGAGCAAGTCTATTTCAGATTATTCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCCAAGGGATAGCAGATAAGAGCAAGTCTATTTCAGATTATTCATT  750

seq1  ACAGCTAACTATTATTATTTATTTATATGCCTCTATAGAAAAACATGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTAACTATTATTATTTATTTATATGCCTCTATAGAAAAACATGTTT  800

seq1  TTGCCTCACATGTCTTGTCCTTATTCATGTGACTTTTCTTTACCCTCAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTCACATGTCTTGTCCTTATTCATGTGACTTTTCTTTACCCTCAGA  850

seq1  GTATAAATTTTCTGATGTTCAGAGTAAACTGCCTATTGCATGAGACTTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAAATTTTCTGATGTTCAGAGTAAACTGCCTATTGCATGAGACTTGG  900

seq1  GTTGCTTCATTTGTAGACTCCATTCTCACAAGGTCCAACCACCAAGAGTA  950
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GTTGCTTCATTTGTAGACTCCATTCTCAC-AGGTCCAACCACCAAGAGTA  949

seq1  ACAGTAAACACTTGTTCACTTACAATGTCTATATTATAGTAGTCAATACT  1000
      |||||||||||||| |||||||||||||||||| ||||||||||||||||
seq2  ACAGTAAACACTTG-TCACTTACAATGTCTATA-TATAGTAGTCAATACT  997

seq1  CTTTTTTTTTCTCAAAAAAAGAAACAAG-AGAAAAGGAAAGGGCAAAAAA  1049
      | ||||||||||| |||||||||||||| |||||||| |||||| |||||
seq2  C-TTTTTTTTCTC-AAAAAAGAAACAAGAAGAAAAGG-AAGGGC-AAAAA  1043

seq1  AATCTAAAACAAAAATCATAG-AGTCATGCTTGAGTCAGCTGTACCTTTC  1098
      ||||| ||||||||||||||| ||||||||| ||||| |||||| ||| |
seq2  AATCT-AAACAAAAATCATAGAAGTCATGCTGGAGTC-GCTGTA-CTTCC  1090

seq1  ACACATCATTTCCAATCACTCATGGGATCTTGTCATCTCTATCTTCAAAA  1148
      ||| ||||||| ||||   |||||||||| || ||||||||| |||||| 
seq2  ACA-ATCATTT-CAAT--ATCATGGGATC-TGGCATCTCTATTTTCAAAT  1135

seq1  TTATTTAGACTGATGGTCTGTCTTCACATTGCTACCCTGA  1188
      |||     ||| |||||||| ||  ||| |||||||||||
seq2  TTA-----ACT-ATGGTCTG-CTCTACA-TGCTACCCTGA  1167