BAC Information

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BAC

Clone NameB6Ng01-054C13
Chromosome1 (Build37)
Map Location 25,252,597 - 25,253,430
singlet/doubletsinglet
Overlap geneBai3
Upstream geneCol9a1, Col19a1, LOC100040475, LOC665829, Lmbrd1, 4930472D16Rik, LOC669171
Downstream geneLOC665595
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054C13.bB6Ng01-054C13.g
ACCDH876988DH876989
length416834
definitionDH876988|Mus musculus domesticus DNA, BAC clone: B6Ng01-054C13, 5' end.DH876989|Mus musculus domesticus DNA, BAC clone: B6Ng01-054C13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
actgtggccatcagctcaagccagaaggtgtcccagcactgagaacagga
acatggacgtaggctgccatctctgaccaagaggcaacctgtcattcaaa
gctccttgcacaggaaaaaaaaatcagtctttatcaaaggaatctcactg
gatatattaaccacccttcagggtatgccatacccaggagtagatggcca
acacagtacgaactcagtggtggctttgtagacattttctcatatggctt
tagttgtgcatttctgtgtcctgttggtcttttgcttgtgtgtattggtt
tccaattttgtggtgtgtgggggtggagtattttgttttgttgttgatgt
cgtccgttcgtttttgttcgtagccatgctttataatcatgtattttttt
ttttttttttttttgc

gaattctaaagtaattcaagtagtttgaaccatttctataacttcctttc
agctgtgcctaatgggccaggaatggagcagaaactaaggaaaacaatct
atgggtgccttgaaggctccgtctgagttctgcagatgagtggcaattac
ctaccgcccgtgaggctggtggctgtgtcagtcggctgcagaattgggtt
gagctaatggaaatgctcttcagaacacatgtggagacagcatttgagga
aaataacaacgtaggaataaagtgaccagtaacattttctattttaaaat
catctaagtattggcttagaggagtagcattctagacttttcaaaggtcc
aatcaaagtttctcgcacttaagacatacactttgctgactttctgccta
aatcagattgcttttaaagattatcttcatgattaagatacattttactc
taatttagatatgttcttttcttctccttgagaaaagtcaataacaacat
caggtaccttctacaccttgaacatgttgggtaagaaagagcctacaagg
tggggataattataaaatgtgtgaccaagtttcttaggtgggccattgaa
gcacttttgtgaagctggactggtggcatacactcctaatcccaggactc
agtacttgggaggtagaggctggtgtctctctgagttggaggctagcttg
atctataaagtgagttccaggacagccaaggatacacaaagtaaacctgt
ctcagaacaaaacaaaacaaaaacctacaaaaccacaaaaagcattttta
tggatggtgtgtgggatttgaggattgatggata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_25252597_25253430
seq2: B6Ng01-054C13.g_68_901

seq1  GAATTCTAAAGTAATTCAAGTAGTTTGAACCATTTCTATAACTTCCTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAAGTAATTCAAGTAGTTTGAACCATTTCTATAACTTCCTTTC  50

seq1  AGCTGTGCCTAATGGGCCAGGAATGGAGCAGAAACTAAGGAAAACAATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTGCCTAATGGGCCAGGAATGGAGCAGAAACTAAGGAAAACAATCT  100

seq1  ATGGGTGCCTTGAAGGCTCCGTCTGAGTTCTGCAGATGAGTGGCAATTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTGCCTTGAAGGCTCCGTCTGAGTTCTGCAGATGAGTGGCAATTAC  150

seq1  CTACCGCCCGTGAGGCTGGTGGCTGTGTCAGTCGGCTGCAGAATTGGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCGCCCGTGAGGCTGGTGGCTGTGTCAGTCGGCTGCAGAATTGGGTT  200

seq1  GAGCTAATGGAAATGCTCTTCAGAACACATGTGGAGACAGCATTTGAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTAATGGAAATGCTCTTCAGAACACATGTGGAGACAGCATTTGAGGA  250

seq1  AAATAACAACGTAGGAATAAAGTGACCAGTAACATTTTCTATTTTAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACAACGTAGGAATAAAGTGACCAGTAACATTTTCTATTTTAAAAT  300

seq1  CATCTAAGTATTGGCTTAGAGGAGTAGCATTCTAGACTTTTCAAAGGTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAAGTATTGGCTTAGAGGAGTAGCATTCTAGACTTTTCAAAGGTCC  350

seq1  AATCAAAGTTTCTCGCACTTAAGACATACACTTTGCTGACTTTCTGCCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAAGTTTCTCGCACTTAAGACATACACTTTGCTGACTTTCTGCCTA  400

seq1  AATCAGATTGCTTTTAAAGATTATCTTCATGATTAAGATACATTTTACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGATTGCTTTTAAAGATTATCTTCATGATTAAGATACATTTTACTC  450

seq1  TAATTTAGATATGTTCTTTTCTTCTCCTTGAGAAAAGTCAATAACAACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTAGATATGTTCTTTTCTTCTCCTTGAGAAAAGTCAATAACAACAT  500

seq1  CAGGTACCTTCTACACCTTGAACATGTTGGGTAAGAAAGAGCCTACAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTACCTTCTACACCTTGAACATGTTGGGTAAGAAAGAGCCTACAAGG  550

seq1  TGGGGATAATTATAAAATGTGTGACCAAGTTTCTTAGGTGGGCCATTGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGATAATTATAAAATGTGTGACCAAGTTTCTTAGGTGGGCCATTGAA  600

seq1  GCACTTTTGTGAAGCTGGACTGGTGGCATACACTCCTAATCCCAGGACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTTTGTGAAGCTGGACTGGTGGCATACACTCCTAATCCCAGGACTC  650

seq1  AGTACTTGGGAGGTAGAGGCTGGTGTCTCTCTGAGTTGGAGGCTAGCTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTTGGGAGGTAGAGGCTGGTGTCTCTCTGAGTTGGAGGCTAGCTTG  700

seq1  ATCTATAAAGTGAGTTCCAGGACAGCCAAGGATACACAAAGTAAACCTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATAAAGTGAGTTCCAGGACAGCCAAGGATACACAAAGTAAACCTGT  750

seq1  CTCAGAACAAAACAAAACAAAAACCTACAAAACCACAAAAAGCATTTTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAACAAAACAAAACAAAAACCTACAAAACCACAAAAAGCATTTTTA  800

seq1  TGGATGGTGTGTGGGATTTGAGGATTGATGGATA  834
      ||||||||||||||||||||||||||||||||||
seq2  TGGATGGTGTGTGGGATTTGAGGATTGATGGATA  834


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