BAC Information

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BAC

Clone NameB6Ng01-054E24
Chromosome1 (Build37)
Map Location 103,627,941 - 103,628,901
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041909, LOC100040993, LOC383650
Downstream geneLOC100041056
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054E24.bB6Ng01-054E24.g
ACCDH877087DH877088
length1,1381,237
definitionDH877087|Mus musculus domesticus DNA, BAC clone: B6Ng01-054E24, 5' end.DH877088|Mus musculus domesticus DNA, BAC clone: B6Ng01-054E24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccataaatgcagtgtgtttaatagctgagttgtactccattgtat
aaatgtaccacattttctgtatccattcctctattgaggaacatatgggt
attttccagcttctgggtattataaataaggctgctatgaacatagtgga
gcatgtgtcctttaacatgttggagcactttttgggtataagcccaggag
tggtattgctgtgtcctcaggtagtactatgtcaaattttctgaagaact
gacagactgatttctaaagtggtactaccagcttgcaaccccaccagcaa
tggagtaatgttcctatttctccacatgcttaccagcatctgttgatacc
tgagttttttatcttagccattcattctaactggtatgaggtgtaatctc
agggttgttttgatttgcattccccagatgacaaaggaagttgaacattt
ctttagatgcttctcagccattcagtattcctcagttgagaattctttga
ttagatctggacaacattttttgatagggttctttggttttctggaatct
aaatttttgagttattagtatatattggatattataagtcctttatcagg
tgtagggatggtgaaaccaggaaaggggctaacatttgaaatgtaataaa
aaacttctaatttaaaaaataataaaagaactgccactgagttaagaagc
aaaaggaaatattttctgttcatttacatttcaaatgtaagtaaagaaca
tatctaaaaaaagaaaagaaaacaaaataacagtgaaatgtttattatcc
tctttgctatgatcaaatacctggcaaaggcaatttacctgatgaaagca
tttatttttgtctactggttcaatgagtggtatttattgtttgggaagac
aaggtaactggtcttatgtcgtctactgtgaacaagtagagccatggatg
ctggagcttagcttcctctctattttcacaagtccaagcctataggctgc
tggagtagtgtaacttcacacttagtgtaaatcttttttatcttcactaa
gcaatgtggaacatccttctcctggctttctcccttgttgatctagttct
tgttagctgaaaatcaacttgagggaatctatcacaca
gaattcaaaggagaataatttatatttgtgtgtaagcatttataatattc
ttcctgttttctctgttccagtttttatatcagcacatttactcttccat
ctaaataatctgttctatcttgattgctaagatagttgctaagttttttg
agctcttatttctaaccactcccatatatgtcaaagtatgttgttcctac
tttccttgttctactaacatgagtttcagttaagatgtttttcttttctt
ttttttctcacagacatctaagtactatttatttgtttgtttatttatct
atttatttatttttccttcctttattgtcaggctgtttgccaatgtatgt
tttgatattttaacccactcatctattatatttgctactgggatataaca
gtcatcttttgctatattttgaaaagtgttcttttgttctagattttttc
attttctgcttttgtcttttaagttagtcatttcagctctttgaaaggat
tcaatgcaatttccatcaaagtccccaaaaaatacttcaaagatatggaa
agaacaattctcaaattcatttgtaaaggaaaaaaaaaaccctactagca
aacacaatacttaataataaaataatggctgggggaatcaccatctctga
cctcaagttttagtacagagcaatagtgataaaaatggaatggcattggt
acagaggtaggtatattgatcaatggaatagaatttaagacccagaaatg
aaagcataaacttatgggtacttgatctttaacaaagaagtcaaacatac
acaatggcaaaaataaagtatcttcaacaaatgacgatgatctgtctgtt
gagatggagaaaaattaaaataagcacatatttatcaccctgcacaaagt
tcaagtccaaatggatcaaagacctaaacatgaaaccagatacactgact
ccaaaagaagaaaactgggaaagatcatagaactcaatggccaggaggaa
atttcctaaacaagctccaatggctcatgctctaggatcagaatataatg
ggaccacatgaactggaaactttctgtaaggcaaagactagccataggac
aaatcattgacctacgattgggaatttcctacctcactctgtgagagaca
attccaataaataagactcgaagctacccatcatacttcaatgtatgact
tacgtgagtcccatggaattcctcgcctggaaccact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_103627941_103628901
seq2: B6Ng01-054E24.b_217_1181

seq1  AGCACTTTTTGGGTATAAGCCCAGGAGTGGTATTGCTGTGTCCTCAGGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTTTTTGGGTATAAGCCCAGGAGTGGTATTGCTGTGTCCTCAGGTA  50

seq1  GTACTATGTCAAATTTTCTGAAGAACTGACAGACTGATTTCTAAAGTGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTATGTCAAATTTTCTGAAGAACTGACAGACTGATTTCTAAAGTGGT  100

seq1  ACTACCAGCTTGCAACCCCACCAGCAATGGAGTAATGTTCCTATTTCTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACCAGCTTGCAACCCCACCAGCAATGGAGTAATGTTCCTATTTCTCC  150

seq1  ACATGCTTACCAGCATCTGTTGATACCTGAGTTTTTTATCTTAGCCATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCTTACCAGCATCTGTTGATACCTGAGTTTTTTATCTTAGCCATTC  200

seq1  ATTCTAACTGGTATGAGGTGTAATCTCAGGGTTGTTTTGATTTGCATTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAACTGGTATGAGGTGTAATCTCAGGGTTGTTTTGATTTGCATTCC  250

seq1  CCAGATGACAAAGGAAGTTGAACATTTCTTTAGATGCTTCTCAGCCATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATGACAAAGGAAGTTGAACATTTCTTTAGATGCTTCTCAGCCATTC  300

seq1  AGTATTCCTCAGTTGAGAATTCTTTGATTAGATCTGGACAACATTTTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTCCTCAGTTGAGAATTCTTTGATTAGATCTGGACAACATTTTTTG  350

seq1  ATAGGGTTCTTTGGTTTTCTGGAATCTAAATTTTTGAGTTATTAGTATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGTTCTTTGGTTTTCTGGAATCTAAATTTTTGAGTTATTAGTATAT  400

seq1  ATTGGATATTATAAGTCCTTTATCAGGTGTAGGGATGGTGAAACCAGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGATATTATAAGTCCTTTATCAGGTGTAGGGATGGTGAAACCAGGAA  450

seq1  AGGGGCTAACATTTGAAATGTAATAAAAAACTTCTAATTTAAAAAATAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCTAACATTTGAAATGTAATAAAAAACTTCTAATTTAAAAAATAAT  500

seq1  AAAAGAACTGCCACTGAGTTAAGAAGCAAAAGGAAATATTTTCTGTTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAACTGCCACTGAGTTAAGAAGCAAAAGGAAATATTTTCTGTTCAT  550

seq1  TTACATTTCAAATGTAAGTAAAGAACATATCTAAAAAAAGAAAAGAAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATTTCAAATGTAAGTAAAGAACATATCTAAAAAAAGAAAAGAAAAC  600

seq1  AAAATAACAGTGAAATGTTTATTATCCTCTTTGCTATGATCAAATACCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAACAGTGAAATGTTTATTATCCTCTTTGCTATGATCAAATACCTG  650

seq1  GCAAAGGCAATTTACCTGATGAAAGCATTTATTTTTGTCTACTGGTTCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGGCAATTTACCTGATGAAAGCATTTATTTTTGTCTACTGGTTCAA  700

seq1  TGAGTGGTATTTATTGTTTGGGAAGACAAGGTAACTGGTCTTATGTCGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGGTATTTATTGTTTGGGAAGACAAGGTAACTGGTCTTATGTCGTC  750

seq1  TACTGTGAACAAGTAGAGCCATGGATGCTGGAGCTTAGCTTCCTCTCTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTGAACAAGTAGAGCCATGGATGCTGGAGCTTAGCTTCCTCTCTAT  800

seq1  TTTCACAAGTCCAAGCCTATAGGCTGCT-GAGTAGTGTAAC-TCACACTT  848
      |||||||||||||||||||||||||||| |||||||||||| ||||||||
seq2  TTTCACAAGTCCAAGCCTATAGGCTGCTGGAGTAGTGTAACTTCACACTT  850

seq1  AGTGTAAATC-TTTTTATCTTCACTAAAGCAATGTGGAACATCC-TCTCC  896
      |||||||||| |||||||||||||| |||||||||||||||||| |||||
seq2  AGTGTAAATCTTTTTTATCTTCACT-AAGCAATGTGGAACATCCTTCTCC  899

seq1  TGCTTGTCT-CCTTGTTGATTCTAGTTCTGTTAAGCTGAAAATCAACATG  945
      ||  | ||| ||||||||| |||||||||  | |||||||||||||| ||
seq2  TGGCTTTCTCCCTTGTTGA-TCTAGTTCTTGTTAGCTGAAAATCAACTTG  948

seq1  AATGAATC-ATCACACA  961
      |  ||||| ||||||||
seq2  AGGGAATCTATCACACA  965