BAC Information

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BAC

Clone NameB6Ng01-054I08
Chromosome1 (Build37)
Map Location 103,620,746 - 103,621,331
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041909, LOC100040993, LOC383650
Downstream geneLOC100041056
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054I08.bB6Ng01-054I08.g
ACCDH877243DH877244
length1,0121,126
definitionDH877243|Mus musculus domesticus DNA, BAC clone: B6Ng01-054I08, 5' end.DH877244|Mus musculus domesticus DNA, BAC clone: B6Ng01-054I08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcaaacatacggctgtcttcacagacactggtgtacataacag
acagcttcagaaagtattttgggccttaggatttcttatgtaagccttta
ctaaagcacctacttctttcattagaacactaaatgccagctggatccac
tgagcgactacttgactgtcttattgctcagatgctcctaggaagagcaa
tttgaccttcttcagaaaggtttttggttttgttctgaattcatttcttt
cctaatggtacaagaattttatttttggcctttgacattacgctaaaccg
ttgttagcttttatttaaatggagatatttctagcattttctttgacatg
aatatttagaagcaatatactgagcgtaattgcttggctgaatttcattg
ttgctgcatttcacaaaataggttttcaaggaaagggaggaatatactag
agtaactagagagaagtaaggaccagtcagaacaaatgtctacctagata
atatttattcattgtacaatcatatatgagcattgttaagggtgccccat
tgccaagtaacagtactagcaggcatgatgacactgaatgatgaacataa
caaattcccaacctgataacagtggtaaagtttaaaaccttgtgaacatt
attgaaaagtaagagaaagattgagtgacatgctattgaaaattgtcagt
atgaattgtattagtgtagggtaatgtggtagttagatttgtgtcaagat
gatataaactaaagttaagtgagaaaagagaaccttaatttaaaatgccc
tctcagaatagcattgaattcattgggcacaagagacaacttccctgaag
agaacaccacacctacagctcagtcacaaagtcaacaattagtaggcagg
acatcatgaacttgaaaagcttctgcaggcaaaggcacttttatagggac
aaaagtttacagaatgggaaatatgattccaattctacatctgactgagt
gctaattttcaa
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagattatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactctgcactaaacctatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggtgatatgggactgcttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaaagggtttatct
atcttgttgattttctcaaagaaccaactcctcgtttggttattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttccctgccgtctactcctcttgggtgaatttgcttcttttttttctagg
gcttttagatgtggttgtcagctgctagtatgtgctgtctcccgttctct
ggaggcactcagcgctttgagttcctctagaatgctttcattgtgtccat
aggttgggtacgtgtgcttcattttcattaaactcaaaagcttattcttc
ttattcttccttgaccatgttcattgagaagaggtatccgctctacggga
gatgtgcttccatatatggtattggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_103620746_103621331
seq2: B6Ng01-054I08.b_46_631 (reverse)

seq1  CAGTGTCATCATGCCTGCTAGTACTGTTACTTGGCAATGGGGCACCCTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTCATCATGCCTGCTAGTACTGTTACTTGGCAATGGGGCACCCTTA  50

seq1  ACAATGCTCATATATGATTGTACAATGAATAAATATTATCTAGGTAGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGCTCATATATGATTGTACAATGAATAAATATTATCTAGGTAGACA  100

seq1  TTTGTTCTGACTGGTCCTTACTTCTCTCTAGTTACTCTAGTATATTCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCTGACTGGTCCTTACTTCTCTCTAGTTACTCTAGTATATTCCTC  150

seq1  CCTTTCCTTGAAAACCTATTTTGTGAAATGCAGCAACAATGAAATTCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCTTGAAAACCTATTTTGTGAAATGCAGCAACAATGAAATTCAGC  200

seq1  CAAGCAATTACGCTCAGTATATTGCTTCTAAATATTCATGTCAAAGAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAATTACGCTCAGTATATTGCTTCTAAATATTCATGTCAAAGAAAA  250

seq1  TGCTAGAAATATCTCCATTTAAATAAAAGCTAACAACGGTTTAGCGTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGAAATATCTCCATTTAAATAAAAGCTAACAACGGTTTAGCGTAAT  300

seq1  GTCAAAGGCCAAAAATAAAATTCTTGTACCATTAGGAAAGAAATGAATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAGGCCAAAAATAAAATTCTTGTACCATTAGGAAAGAAATGAATTC  350

seq1  AGAACAAAACCAAAAACCTTTCTGAAGAAGGTCAAATTGCTCTTCCTAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAAAACCAAAAACCTTTCTGAAGAAGGTCAAATTGCTCTTCCTAGG  400

seq1  AGCATCTGAGCAATAAGACAGTCAAGTAGTCGCTCAGTGGATCCAGCTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCTGAGCAATAAGACAGTCAAGTAGTCGCTCAGTGGATCCAGCTGG  450

seq1  CATTTAGTGTTCTAATGAAAGAAGTAGGTGCTTTAGTAAAGGCTTACATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAGTGTTCTAATGAAAGAAGTAGGTGCTTTAGTAAAGGCTTACATA  500

seq1  AGAAATCCTAAGGCCCAAAATACTTTCTGAAGCTGTCTGTTATGTACACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCCTAAGGCCCAAAATACTTTCTGAAGCTGTCTGTTATGTACACC  550

seq1  AGTGTCTGTGAAGACAGCCGTATGTTTGAAGAATTC  586
      ||||||||||||||||||||||||||||||||||||
seq2  AGTGTCTGTGAAGACAGCCGTATGTTTGAAGAATTC  586