BAC Information

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BAC

Clone NameB6Ng01-054K13
Chromosome1 (Build37)
Map Location 174,665,126 - 174,665,691
singlet/doubletsinglet
Overlap genenone
Upstream geneSlamf1, Cd84, Slamf6, Vangl2, LOC100040199, Nhlh1, Ncstn, Copa, Pex19, LOC100041219, Wdr42a, Pea15a, Casq1, Timm23p, Atp1a2, Igsf8, Kcnj9, Kcnj10, Pigm, LOC665819, Slamf9, LOC100040274, Igsf9, Tagln2, Ccdc19, EG240916, Slamf8, Fcrl6, Dusp23, LOC100040320, Crp
Downstream geneLOC665875, Apcs, Olfr16, GA_x5J8B7W5Q1F-395172-396104, Olfr1408, GA_x5J8B7W5Q1F-344462-343889, Olfr1406, Olfr218, Olfr1405-ps1, Olfr1404, Fcer1a, Olfr1403, Darc, Cadm3, Aim2, EG240921, BC094916, LOC623121, AI447904, E430029J22Rik, LOC665972, AI607873
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054K13.bB6Ng01-054K13.g
ACCDH877343DH877344
length8911,077
definitionDH877343|Mus musculus domesticus DNA, BAC clone: B6Ng01-054K13, 5' end.DH877344|Mus musculus domesticus DNA, BAC clone: B6Ng01-054K13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagtgagaattttattgaggatttttgc
atcgatatttataagagaaattggtctgaagttctctatctttgttggga
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaatagctgcttctatttct
ttaggtgatatgggactgtttagatgatcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
tttcctgccgtctactcctcttgggtgaatttgcttccttt
gaattcaaatattgttttccctagacttacgggaagaggaacctcacctt
aaaaaaaatgccttcatcagattgactgtaggtaaatctatggtacattt
tcctgattaataattgatgtgggagggcccagcccactgtgggtggtgtc
acccttggcaggtgttctgtgttatcaatgaaagcaagctgggcaagcca
ggaagagcaaggcagtaagcagtgcttctcctccagttcttgcctccagg
atcctgccttgtgctccctcagagatggagtatgattccagagctgtaaa
cttaataaacctctccttccccaagcctatcccaaagaattcaagtacta
actatataataaggtggaggagtaaatgcccatcttctgtgctgatttta
gtggaaactgttccagtttttttcccatttaccatggtgttggctttaag
cttatcacagtcagcctttaccatgctgagatatgtcccttcaacttctc
taaatactgaagtactaaatacttaagggtatttgttgtcaagtgatgct
agtttgtcttttcagatgcccttttcttgcatctatttagatgatcacat
gatttctgtccttaagtctacttacatattgggaaaaagttaatgatttg
tatctgttgaacaaatcttgcatccctaagaagaaatcaacttcatcata
attaatgatatttttgatgtgttcttgagttcattttgccagcatttcat
ttagacatttttgcatctatcttcattgtgggaaatgttctataattttc
tttttggttatgtcctctgattttggaattggagcaatactggcttcatg
aaaacagcttgggtagcattctttctttttctaatatggattaggtgagg
tgcactggtgttagctgtctttgaaagtctggtgggatcacaatgagccc
atctgtgcttggactgtttttttagcaggagctttttctttttctttttc
ttctagatttgctcaatttcctggtgttagagatattgtaagtgtcatac
attaggttaattgtagtgctacctcga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_174665126_174665691
seq2: B6Ng01-054K13.b_41_606 (reverse)

seq1  CAGATACCAGGTACCAAAGTTGAATCAGGATCAAGTTGACCATCTAAACA  50
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CAGATACCAGGTACCAAAGTTGAATCAGGATCAAGTTGATCATCTAAACA  50

seq1  GTCCCATATCACCTAAAGAAATAGAAGCAGTTATTAATAGTCTCCCAACC  100
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GTCCCATATCACCTAAAGAAATAGAAGCAGCTATTAATAGTCTCCCAACC  100

seq1  AAAAAAAGCCCAGGACCAGATGGGTTTAGTGCAGAGTTCTACCAGACCTT  150
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AAAAAAAGCCCAGGACCAGATGGGTTTAGTGCAGAGTTCTATCAGACCTT  150

seq1  CAAAGAAGATCTAATTCCAATTCTGCACAAACTATTTCACAAAATAGAAG  200
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CAAAGAAGATCTAATTCCAGTTCTGCACAAACTATTTCACAAAATAGAAG  200

seq1  TAGAAGGTACTCTACCCAACTCATTTTATGAAGCCACTATTACTCTGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGGTACTCTACCCAACTCATTTTATGAAGCCACTATTACTCTGATA  250

seq1  CCTAAACCACAGAAAGACCCAACAAAGATAGAGAACTTCAGACCAATTTC  300
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CCTAAACCACAGAAAGTCCCAACAAAGATAGAGAACTTCAGACCAATTTC  300

seq1  TCTTATGAATATCGATGCAAAAATCCTCAATAAAATTCTCGCTAACCGAA  350
      |||||| ||||||||||||||||||||||||||||||||| |||||||||
seq2  TCTTATAAATATCGATGCAAAAATCCTCAATAAAATTCTCACTAACCGAA  350

seq1  TCCAAGAACACATTAAAGCAATCATCCATCCTGACCAAGTAGGTTTTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGAACACATTAAAGCAATCATCCATCCTGACCAAGTAGGTTTTATT  400

seq1  CCAGGGATGCAGGGATGGTTTAATATACGAAAATCCATCAACGTAATCCA  450
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CCAGGGATGCAGGGATGGTTTAATATACGAAAATCCATCAATGTAATCCA  450

seq1  TTATATAAACAAACTCAAAGACAAAAACCACATGATCATCTCGTTAGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATAAACAAACTCAAAGACAAAAACCACATGATCATCTCGTTAGATG  500

seq1  CAGAAAAAGCATTTGACAAGATCCAACACCCATTCATGATAAAAGTTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAAGCATTTGACAAGATCCAACACCCATTCATGATAAAAGTTTTG  550

seq1  GAAAGATCAGGAATTC  566
      ||||||||||||||||
seq2  GAAAGATCAGGAATTC  566