BAC Information

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BAC

Clone NameB6Ng01-054P15
Chromosome1 (Build37)
Map Location 149,275,077 - 149,275,594
singlet/doubletsinglet
Overlap genenone
Upstream geneB830045N13Rik, LOC100043240
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054P15.bB6Ng01-054P15.g
ACCDH877572DH877573
length1,0151,171
definitionDH877572|Mus musculus domesticus DNA, BAC clone: B6Ng01-054P15, 5' end.DH877573|Mus musculus domesticus DNA, BAC clone: B6Ng01-054P15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatggaagtttatatacgagaaatcctagttgtacaccgtggaaa
gaaaccagaatccctttttcaaacaagaagaaagacaaggttcagaatca
gttgtccttttacctacacatgtgtgctacagccattcacgtcctcatta
gcattcatgaatgcacacacataaatatacacatatcatgaacaaagata
taaaataaaaacacacctcggaaaattccctttgacttttataattaaat
tccactttttgttactatattaattaaatatacttcggtgttaaagatgt
actttttgagattgtaaattgtttctacatttcctgttcttcctcaaaac
tctctcatatacctcttcccattcttcttcaaattcatcccctctttttg
catatttcatgcatatttgttttgtatttacatatatatttccaaataaa
gcctgttaagtctatatattccttgcttatatgtatttaaggctggccat
ttgacactggacaacccactggtattcttttccctggaaggatcacctct
tccactcctagctttactctgctgtctggagttcttgtgtaggactgaaa
tcttttggtcttttcatcttatatggggtatttattggtgtcatctgtgt
tcatttgggcagtcattttggagaggacatgaattcagtttctggtgttt
ctaggagatataatctcatagcaaatgccccaatcaactgactcctacaa
tctttctttcccttttctacaatgatccttgaatgtgtcagggttttgca
tagaaaacaagaaagcatcttcaaaacatgatgctctaaaaattagatgt
tcacatgaaaaagaatgggattccaaccatatctatcaccttgcacaaaa
gtaactccaaattgatcatgatctaaacctcaaaacctgaaacacttaaa
tggattgagaaaagaaaaggaaggccctccatgattagatgtacatgaag
aggactgtatttcac
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccatggcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccaa
tggaggagctagagaagtagccaaggagctaaaggatctgcaccctatag
gtggacaacattatgagctaaccagtacccgagctcttgactctagctgc
atatatatcaagatgcttagtcgcatcacttgaagagaggtccattgact
ggcaaccttaatgccagttcaggaattcaggtcaaaggggagtgggtgtg
caggggaagtgggggtgggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_149275077_149275594
seq2: B6Ng01-054P15.b_47_565 (reverse)

seq1  GTGGGTTGTCCAGTGTCAAATGGCCAGCCTTAAATACATATAAGCAAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTTGTCCAGTGTCAAATGGCCAGCCTTAAATACATATAAGCAAGGA  50

seq1  ATATATAGACTTAACAGGCTTTATTTGGAAATATATATGTAAATACAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATAGACTTAACAGGCTTTATTTGGAAATATATATGTAAATACAAAA  100

seq1  CAAATATGCATGAAATATGCAAAAAGAGGGGATGAATTTGAAGAAGAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATGCATGAAATATGCAAAAAGAGGGGATGAATTTGAAGAAGAATG  150

seq1  GGAAGAGGTATATGAGAGAGTTTTGAGGAAGAACAGGAAATGTAGAAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAGGTATATGAGAGAGTTTTGAGGAAGAACAGGAAATGTAGAAACA  200

seq1  ATTTACAATCTCAAAAAGTACATCTTTAACACCGAAGTATATTTAATTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACAATCTCAAAAAGTACATCTTTAACACCGAAGTATATTTAATTAA  250

seq1  TATAGTAACAAAAAGTGGAATTTAATTATAAAAGTCAAAGGGAATTTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTAACAAAAAGTGGAATTTAATTATAAAAGTCAAAGGGAATTTTCC  300

seq1  GAGGTGTGTTTTTATTTTATATCTTTGTTCATGATATGTGTATATTTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGTGTTTTTATTTTATATCTTTGTTCATGATATGTGTATATTTATG  350

seq1  TGTGTGCATTCATGAATGCTAATGAGGACGTGAATGGCTGTAGCACACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGCATTCATGAATGCTAATGAGGACGTGAATGGCTGTAGCACACAT  400

seq1  GTGTAGGTAAAAGGACAACTGATTCTGAACCTTGTCTTTCTTCTTGTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGGTAAAAGGACAACTGATTCTGAACCTTGTCTTTCTTCTTGTTTG  450

seq1  AAAAAGGGATTCTGGTTTCTTTCCACGGTGTAC-GCTAGGATTTCTCGTA  499
      |||||||||||||||||||||||||||||||||  |||||||||||||||
seq2  AAAAAGGGATTCTGGTTTCTTTCCACGGTGTACAACTAGGATTTCTCGTA  500

seq1  TATAAACTTCCATGAATTC  518
      |||||||||||||||||||
seq2  TATAAACTTCCATGAATTC  519