BAC Information

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BAC

Clone NameB6Ng01-054P17
Chromosome15 (Build37)1 (Build37)
Map Location 45,744,566 - 45,745,64484,888,387 - 84,888,423
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG432950, Kcnv1
Downstream geneLOC100039389, EG432951
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054P17.bB6Ng01-054P17.g
ACCDH877576DH877577
length1,071136
definitionDH877576|Mus musculus domesticus DNA, BAC clone: B6Ng01-054P17, 5' end.DH877577|Mus musculus domesticus DNA, BAC clone: B6Ng01-054P17, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(45,744,566 - 45,745,644)(84,888,387 - 84,888,423)
sequence
gaattctaagcccagggtcggctcaaggacttgctaggacattggaacac
tggtggaggctattctaacttagctataggtcaaaatccatccttaaagg
gacttataataaaacaatattgaaggaaagcacacagatcagctcactga
ctaaagtaagggcagatttggagcattccttttacaggatgccactgttc
cagaagactaagtttccatgaattttttgcctccggaatgtgttcatgct
tttgggcctgtcacagtcactactggagtaggtgtggcagggaatctcta
tgcagcggtgctgcgaagctcaggaggaggttgttgattggtgcgacagt
gaagccactgctgccacaccacatggaaggctaccactaccatcaccacc
tgcagccaatgctacaccatgtggactccatctgatggcactcactgtca
tccaccacatggatttccactgctgccgctgctgccattgactccacgcc
accgaaaatccaaactgccacctcagtttcttcttttcaccaggataccc
gagagcttactagctgaacctctccagatgcccccccccttcttctgtgc
cagctgcaggtctctctaatagccctgcattggtgctgaactttacccct
cctgtcatgcattctatggccacagccagccccccaagtccttcttctcc
tccaggaacacctgagtcagcatcagtccttcctctaagggaagtggctg
gtgttgatggtctggtcagagtacatgtttctttctcgctgagtgaactt
tctcaaatagaaaggacagtgggttcctatactttgaactccttcagctt
tattatagagttgcaggatatcactcaatcttatagcttgacttttcatg
atgttcaatgattctttactaataatttacttcctgatgaatgcagcaag
tttggggaagaggcaaaaagcacaagatgaaattcatcaagcagatgaac
atatccattagatctgagcagtgcctgaccaggatccccatgattacagt
tccacaggtgaatacttagcc
tttgtcattgtctgtttaccaacaccatgcagtttttaatcactattgct
ttgtagtacagctaaagtttaggaacggtgattcccccagaagttttttt
ttttttttttttggtttttggtctttggttgttttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_45744566_45745644
seq2: B6Ng01-054P17.b_48_1118

seq1  GAATTCTAAGCCCAGGGTCGGCTCAAGGACTTGCTAGGACATTGGAACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGCCCAGGGTCGGCTCAAGGACTTGCTAGGACATTGGAACAC  50

seq1  TGGTGGAGGCTATTCTAACTTAGCTATAGGTCAAAATCCATCCTTAAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGAGGCTATTCTAACTTAGCTATAGGTCAAAATCCATCCTTAAAGG  100

seq1  GACTTATAATAAAACAATATTGAAGGAAAGCACACAGATCAGCTCACTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTATAATAAAACAATATTGAAGGAAAGCACACAGATCAGCTCACTGA  150

seq1  CTAAAGTAAGGGCAGATTTGGAGCATTCCTTTTACAGGATGCCACTGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGTAAGGGCAGATTTGGAGCATTCCTTTTACAGGATGCCACTGTTC  200

seq1  CAGAAGACTAAGTTTCCATGAATTTTTTGCCTCCGGAATGTGTTCATGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGACTAAGTTTCCATGAATTTTTTGCCTCCGGAATGTGTTCATGCT  250

seq1  TTTGGGCCTGTCACAGTCACTACTGGAGTAGGTGTGGCAGGGAATCTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGCCTGTCACAGTCACTACTGGAGTAGGTGTGGCAGGGAATCTCTA  300

seq1  TGCAGCGGTGCTGCGAAGCTCAGGAGGAGGTTGTTGATTGGTGCGACAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCGGTGCTGCGAAGCTCAGGAGGAGGTTGTTGATTGGTGCGACAGT  350

seq1  GAAGCCACTGCTGCCACACCACATGGAAGGCTACCACTACCATCACCACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCACTGCTGCCACACCACATGGAAGGCTACCACTACCATCACCACC  400

seq1  TGCAGCCAATGCTACACCATGTGGACTCCATCTGATGGCACTCACTGTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCCAATGCTACACCATGTGGACTCCATCTGATGGCACTCACTGTCA  450

seq1  TCCACCACATGGATTTCCACTGCTGCCGCTGCTGCCATTGACTCCACGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCACATGGATTTCCACTGCTGCCGCTGCTGCCATTGACTCCACGCC  500

seq1  ACCGAAAATCCAAACTGCCACCTCAGTTTCTTCTTTTCACCAGGATACCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGAAAATCCAAACTGCCACCTCAGTTTCTTCTTTTCACCAGGATACCC  550

seq1  GAGAGCTTACTAGCTGAACCTCTCCAGATGCCCCCCCCCTTCTTCTGTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCTTACTAGCTGAACCTCTCCAGATGCCCCCCCCCTTCTTCTGTGC  600

seq1  CAGCTGCAGGTCTCTCTAATAGCCCTGCATTGGTGCTGAACTTTACCCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGCAGGTCTCTCTAATAGCCCTGCATTGGTGCTGAACTTTACCCCT  650

seq1  CCTGTCATGCATTCTATGGCCACAGCCAGCCCCCCAAGTCCTTCTTCTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCATGCATTCTATGGCCACAGCCAGCCCCCCAAGTCCTTCTTCTCC  700

seq1  TCCAGGAACACCTGAGTCAGCATCAGTCCTTCCTCTAAGGGAAGTGGCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGAACACCTGAGTCAGCATCAGTCCTTCCTCTAAGGGAAGTGGCTG  750

seq1  GTGTTGATGGTCTGGTCAGAGTACATGTTTCTTTCTCGCTGAGTGAACTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGATGGTCTGGTCAGAGTACATGTTTCTTTCTCGCTGAGTGAACTT  800

seq1  TCTCAAATAGAAAGGACAGTGGGTTCCTATACTTTGAACTCCTTCAGCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAATAGAAAGGACAGTGGGTTCCTATACTTTGAACTCCTTCAGCTT  850

seq1  TATTATAGAGTTGCAGGATATCACTCAATCTTATAGCTTGACTTTTCATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATAGAGTTGCAGGATATCACTCAATCTTATAGCTTGACTTTTCATG  900

seq1  ATGTTCAAATGATTC-TTACTAATAATTTACTTCCTGATGAATGCAGGCA  949
      |||||| |||||||| |||||||||||||||||||||||||||||| |||
seq2  ATGTTC-AATGATTCTTTACTAATAATTTACTTCCTGATGAATGCA-GCA  948

seq1  AGTTT-GGGAAGAGGCAAAAAGGCACACAGATGAAATTCATCAAGCAGAT  998
      ||||| ||||||||||||||| ||||| ||||||||||||||||||||||
seq2  AGTTTGGGGAAGAGGCAAAAA-GCACA-AGATGAAATTCATCAAGCAGAT  996

seq1  GGAACATATCCAATTAGATCTGAGGCAGTGCCTGACCAGGATCCCCAATG  1048
       |||||||||| ||||||||||| |||||||||||||||||||||| |||
seq2  -GAACATATCC-ATTAGATCTGA-GCAGTGCCTGACCAGGATCCCC-ATG  1042

seq1  GAATTACAGTTCCACAGGTGATAACTTAGCC  1079
        |||||||||||||||||||  ||||||||
seq2  --ATTACAGTTCCACAGGTGAATACTTAGCC  1071

seq1: chr1_84888387_84888423
seq2: B6Ng01-054P17.g_168_208 (reverse)

seq1  CAAAAAAACCAAA----AAAAACCAAAAAAAAAAAAAAAAA  37
      ||||| |||||||    ||||||||||||||||||||||||
seq2  CAAAACAACCAAAGACCAAAAACCAAAAAAAAAAAAAAAAA  41