MoG+ -Mouse Genome database with high added value-

BAC clone ordering.

BAC Information

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BAC

Clone Name	B6Ng01-055H11
Chromosome	X (Build37)	1 (Build37)
Map Location	117,809,444 - 117,810,216	48,226,696 - 48,227,389
singlet/doublet	singlet	singlet
Overlap gene	Pcdh11x
Upstream gene	Pabpc5, LOC236983, LOC674318, EG545741, LOC100039461, H2afb3
Downstream gene	LOC245576, LOC385419, EG434907
Link	Open Mouse BAC browser

Click to get alignment info.

name	Pabpc5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93728 MGI:2136401
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC236983 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:236983
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 Proteins pseudo : _no_value

name	LOC674318 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:674318
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	EG545741 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545741 MGI:3648580
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 mRNAs, 234 ESTs, 25 Proteins

name	LOC100039461 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039461
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs

name	Pcdh11x (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245578 MGI:2442849
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	H2afb3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:624957 MGI:3644875
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins

name	LOC245576 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:245576
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 26 Proteins pseudo : _no_value

name	LOC385419 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:385419
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 Proteins pseudo : _no_value

name	EG434907 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434907 MGI:3647868
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 329 ESTs, 8 Proteins

name	Pabpc5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370786 GeneID:93728 MGI:2136401
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : poly A binding protein, cytoplasmic 5 transcript_id : NM_053114.2

name	EG545741 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149272160 GeneID:545741 MGI:3648580
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 mRNAs, 233 ESTs, 25 Proteins product : predicted gene, EG545741, transcript variant 1 transcript_id : XM_001487781.1

name	EG545741 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94408117 GeneID:545741 MGI:3648580
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 177 ESTs, 2 Proteins product : predicted gene, EG545741, transcript variant 2 transcript_id : XM_974196.1

name	LOC100039461 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272149 GeneID:100039461
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs product : hypothetical protein LOC100039461 transcript_id : XM_001472925.1

name	Pcdh11x (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487050 GeneID:245578 MGI:2442849
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protocadherin 11 X-linked transcript_id : NM_001081385.1

name	H2afb3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94408124 GeneID:624957 MGI:3644875
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins product : H2A histone family, member B3 transcript_id : XM_889501.2

name	EG434907 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149272151 GeneID:434907 MGI:3647868
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 329 ESTs, 8 Proteins product : predicted gene, EG434907 transcript_id : XM_486849.5

name	Pabpc5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29336045 CCDS:CCDS30369.1 GeneID:93728 MGI:2136401
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : poly A binding protein cytoplasmic 5 product : poly A binding protein, cytoplasmic 5 protein_id : NP_444344.1

name	EG545741 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149272161 GeneID:545741 MGI:3648580
definition	codon_start : 1 product : similar to glyceraldehyde-3-phosphate-dehydrogenase isoform 1 protein_id : XP_001487831.1

name	EG545741 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94408118 GeneID:545741 MGI:3648580
definition	codon_start : 1 product : similar to glyceraldehyde-3-phosphate-dehydrogenase isoform 2 protein_id : XP_979290.1

name	LOC100039461 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272150 GeneID:100039461
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472975.1

name	H2afb3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83003549 GeneID:624957 MGI:3644875
definition	codon_start : 1 product : similar to H2A-Bbd protein_id : XP_894594.1

name	Pcdh11x (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487051 GeneID:245578 MGI:2442849
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007156 - homophilic cell adhesion [Evidence IEA] codon_start : 1 product : protocadherin 11 X-linked protein_id : NP_001074854.1

name	EG434907 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149272152 GeneID:434907 MGI:3647868
definition	codon_start : 1 product : similar to Ubiquitin-like, containing PHD and RING finger domains, 1 protein_id : XP_486849.5

name	LOC236983 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:236983
definition	number : 1 pseudo : _no_value

name	LOC674318 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674318
definition	number : 1 pseudo : _no_value

name	LOC674318 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674318
definition	number : 2 pseudo : _no_value

name	LOC245576 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:245576
definition	number : 1 pseudo : _no_value

name	LOC245576 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:245576
definition	number : 2 pseudo : _no_value

name	LOC385419 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:385419
definition	number : 2 pseudo : _no_value

name	LOC385419 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:385419
definition	number : 1 pseudo : _no_value

clone name	MSMg01-210E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533E22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-435D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-215H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001K05
singlet/doublet	singlet
plural/unique	unique